PCHAS_0625000 | lysophospholipase, putative

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  • Computed_GO_Function_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_0625000OTHER0.9998840.0000570.000059
No Results

  • Fasta :-

    >PCHAS_0625000 MGETELDNDELRKTVFNIDGNPKVGHFYNKDGLLLKTYRWPVKKAAGIVLLLHGLKGHAR FTYLKPNAEVIDNNEVLVIDDDNYYVYSGSWVEKFNQNEYSVYAMDLQGHGESEARKNLR GHFKRFNDLVDDVLQYMNQIQDEIANDNKIDDESYSIVPAKKQKLPMYIIGYSMGGNIAL RILQILNKAKVKNNSKLEDTVIYAKADTLTGDCTNIYDSDNDNDNDNDNDDDDDDDDDDV YYDVYDGDNVNDNNPTNKATNVSEVVDINNVSNDNTTKHYACTYCIANGSTCDNDSVSTT TGGSDIDNFSVSADDSVAASTSTEDNVVASTSTEYNEVPSTSTEDNVVASTSTEDNVVVS TSTEDNEVPSTSTEDNVVASTSTEDNVVVSTSTEDNEVPSTSTEDNEVVSTSTEDNEVPS TSTEDNEVASTSTEDNEVPSTSTEDNVVASTSTEDNVVVSTSTEDNEVPSTSTEDNVVAS TSTEDNVVVSTSTEDTVVPSTSTEDNAVASTSTDDNAIASTSTDDNLIASTSTEDNAVAS TSTEDNAVASTSTEDNVVASTSTDDNAVASTSTEDNAVASTSTDDNAVASTSTEDIVVVG TSTDDNDKNDDKYNCLDKLNIKGCVSLAGMVSFERIAQPGTYLFNYVYLPVTHFLSYIAP NLETKSELPYKGYPFIDNLCKLDKYRGNRGVTVKCVYELIKAMGALNDDINYIPKDIPIL FVHAKGDSICYYKGVEMFYDRLHSDNKELFPVDNMDHSITLEPGNEQVLEKIIKWLNNLK NNNKNAIENQE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0625000.fa Sequence name : PCHAS_0625000 Sequence length : 791 VALUES OF COMPUTED PARAMETERS Coef20 : 3.049 CoefTot : -0.250 ChDiff : -99 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.024 1.118 0.031 0.554 MesoH : -0.679 0.129 -0.381 0.187 MuHd_075 : 31.393 21.615 8.594 6.888 MuHd_095 : 17.024 13.367 6.142 4.110 MuHd_100 : 21.207 13.514 6.234 3.427 MuHd_105 : 23.696 13.744 6.348 3.556 Hmax_075 : -5.600 7.817 -3.245 2.870 Hmax_095 : -3.400 4.462 -2.596 1.986 Hmax_100 : -0.900 6.700 -1.923 2.510 Hmax_105 : 0.263 5.250 -1.755 2.153 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9664 0.0336 DFMC : 0.9405 0.0595
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 791 PCHAS_0625000 MGETELDNDELRKTVFNIDGNPKVGHFYNKDGLLLKTYRWPVKKAAGIVLLLHGLKGHARFTYLKPNAEVIDNNEVLVID 80 DDNYYVYSGSWVEKFNQNEYSVYAMDLQGHGESEARKNLRGHFKRFNDLVDDVLQYMNQIQDEIANDNKIDDESYSIVPA 160 KKQKLPMYIIGYSMGGNIALRILQILNKAKVKNNSKLEDTVIYAKADTLTGDCTNIYDSDNDNDNDNDNDDDDDDDDDDV 240 YYDVYDGDNVNDNNPTNKATNVSEVVDINNVSNDNTTKHYACTYCIANGSTCDNDSVSTTTGGSDIDNFSVSADDSVAAS 320 TSTEDNVVASTSTEYNEVPSTSTEDNVVASTSTEDNVVVSTSTEDNEVPSTSTEDNVVASTSTEDNVVVSTSTEDNEVPS 400 TSTEDNEVVSTSTEDNEVPSTSTEDNEVASTSTEDNEVPSTSTEDNVVASTSTEDNVVVSTSTEDNEVPSTSTEDNVVAS 480 TSTEDNVVVSTSTEDTVVPSTSTEDNAVASTSTDDNAIASTSTDDNLIASTSTEDNAVASTSTEDNAVASTSTEDNVVAS 560 TSTDDNAVASTSTEDNAVASTSTDDNAVASTSTEDIVVVGTSTDDNDKNDDKYNCLDKLNIKGCVSLAGMVSFERIAQPG 640 TYLFNYVYLPVTHFLSYIAPNLETKSELPYKGYPFIDNLCKLDKYRGNRGVTVKCVYELIKAMGALNDDINYIPKDIPIL 720 FVHAKGDSICYYKGVEMFYDRLHSDNKELFPVDNMDHSITLEPGNEQVLEKIIKWLNNLKNNNKNAIENQE 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ....................................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0625000 12 LDNDELR|KT 0.087 . PCHAS_0625000 13 DNDELRK|TV 0.098 . PCHAS_0625000 23 NIDGNPK|VG 0.056 . PCHAS_0625000 30 VGHFYNK|DG 0.061 . PCHAS_0625000 36 KDGLLLK|TY 0.057 . PCHAS_0625000 39 LLLKTYR|WP 0.079 . PCHAS_0625000 43 TYRWPVK|KA 0.075 . PCHAS_0625000 44 YRWPVKK|AA 0.230 . PCHAS_0625000 56 LLLHGLK|GH 0.053 . PCHAS_0625000 60 GLKGHAR|FT 0.124 . PCHAS_0625000 65 ARFTYLK|PN 0.067 . PCHAS_0625000 94 SGSWVEK|FN 0.084 . PCHAS_0625000 116 HGESEAR|KN 0.079 . PCHAS_0625000 117 GESEARK|NL 0.112 . PCHAS_0625000 120 EARKNLR|GH 0.112 . PCHAS_0625000 124 NLRGHFK|RF 0.076 . PCHAS_0625000 125 LRGHFKR|FN 0.378 . PCHAS_0625000 149 EIANDNK|ID 0.062 . PCHAS_0625000 161 YSIVPAK|KQ 0.061 . PCHAS_0625000 162 SIVPAKK|QK 0.090 . PCHAS_0625000 164 VPAKKQK|LP 0.071 . PCHAS_0625000 181 GGNIALR|IL 0.085 . PCHAS_0625000 188 ILQILNK|AK 0.059 . PCHAS_0625000 190 QILNKAK|VK 0.062 . PCHAS_0625000 192 LNKAKVK|NN 0.089 . PCHAS_0625000 196 KVKNNSK|LE 0.060 . PCHAS_0625000 205 DTVIYAK|AD 0.059 . PCHAS_0625000 258 DNNPTNK|AT 0.079 . PCHAS_0625000 278 SNDNTTK|HY 0.060 . PCHAS_0625000 608 STDDNDK|ND 0.056 . PCHAS_0625000 612 NDKNDDK|YN 0.060 . PCHAS_0625000 618 KYNCLDK|LN 0.065 . PCHAS_0625000 622 LDKLNIK|GC 0.058 . PCHAS_0625000 635 GMVSFER|IA 0.097 . PCHAS_0625000 665 APNLETK|SE 0.074 . PCHAS_0625000 671 KSELPYK|GY 0.067 . PCHAS_0625000 681 FIDNLCK|LD 0.055 . PCHAS_0625000 684 NLCKLDK|YR 0.074 . PCHAS_0625000 686 CKLDKYR|GN 0.106 . PCHAS_0625000 689 DKYRGNR|GV 0.351 . PCHAS_0625000 694 NRGVTVK|CV 0.099 . PCHAS_0625000 701 CVYELIK|AM 0.069 . PCHAS_0625000 715 DINYIPK|DI 0.079 . PCHAS_0625000 725 ILFVHAK|GD 0.078 . PCHAS_0625000 733 DSICYYK|GV 0.082 . PCHAS_0625000 741 VEMFYDR|LH 0.081 . PCHAS_0625000 747 RLHSDNK|EL 0.073 . PCHAS_0625000 771 NEQVLEK|II 0.066 . PCHAS_0625000 774 VLEKIIK|WL 0.065 . PCHAS_0625000 780 KWLNNLK|NN 0.055 . PCHAS_0625000 784 NLKNNNK|NA 0.067 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0625000 ATGGGAGAAACTGAATTGGATAATGATGAATTAAGAAAAACTGTTTTTAATATAGACGGA AATCCTAAGGTTGGTCATTTCTATAATAAAGATGGTTTATTATTAAAAACATATAGGTGG CCAGTTAAAAAGGCGGCAGGTATTGTACTATTACTCCATGGATTGAAAGGCCATGCTCGA TTCACTTATTTGAAACCAAATGCAGAAGTGATAGATAACAATGAAGTTTTAGTGATAGAT GATGATAACTACTATGTTTACAGTGGTAGTTGGGTTGAAAAATTTAATCAGAACGAATAT TCAGTATATGCGATGGATTTACAAGGGCATGGTGAATCAGAGGCGCGAAAAAATTTAAGA GGTCATTTTAAACGATTTAATGATCTAGTTGATGATGTATTACAATATATGAATCAAATT CAAGATGAAATTGCAAATGATAATAAAATAGATGATGAATCTTATAGTATAGTACCAGCT AAAAAACAAAAACTTCCTATGTATATTATTGGATATTCGATGGGAGGAAATATTGCTTTA AGGATATTACAAATATTGAATAAGGCAAAAGTAAAAAACAATTCTAAGCTTGAAGATACA GTAATCTATGCAAAAGCTGATACCCTGACAGGCGATTGCACTAATATTTATGATAGTGAT AATGATAATGACAATGATAATGACAATGATGATGATGACGATGATGACGATGATGATGTT TATTACGATGTTTATGATGGAGATAATGTTAATGATAATAATCCTACAAATAAAGCTACT AATGTAAGTGAAGTTGTTGACATTAATAATGTTTCTAATGATAATACTACAAAGCATTAT GCTTGTACCTATTGCATTGCAAATGGCAGCACATGTGATAATGATAGTGTTAGTACCACC ACTGGTGGTAGTGATATCGACAATTTCAGTGTTAGTGCCGATGACAGTGTAGCAGCCAGT ACTAGTACAGAAGACAATGTAGTAGCCAGTACTAGTACAGAATATAATGAAGTGCCCAGT ACTAGTACAGAAGATAATGTAGTAGCCAGTACTAGTACAGAAGACAATGTAGTAGTCAGC ACTAGTACAGAAGATAATGAAGTGCCCAGTACTAGTACAGAAGATAATGTAGTAGCCAGT ACTAGTACAGAAGACAATGTAGTAGTTAGCACTAGTACAGAAGATAATGAAGTGCCCAGT ACTAGTACAGAAGATAATGAAGTAGTTAGCACTAGTACAGAAGATAATGAAGTGCCCAGT ACTAGTACAGAAGATAATGAAGTAGCCAGTACTAGTACAGAAGATAATGAAGTGCCCAGT ACTAGTACAGAAGATAATGTAGTAGCCAGTACTAGTACAGAAGACAATGTAGTAGTCAGC ACTAGTACAGAAGATAATGAAGTGCCCAGTACTAGTACAGAAGATAATGTAGTAGCCAGT ACTAGTACAGAAGACAATGTAGTAGTTAGCACTAGTACAGAAGACACTGTAGTACCCAGT ACTAGTACAGAAGACAATGCAGTAGCCAGTACTAGTACCGATGATAATGCAATAGCTAGT ACTAGTACCGATGATAATTTAATAGCCAGTACTAGTACAGAAGACAATGCAGTAGCCAGT ACTAGTACAGAAGACAATGCAGTAGCCAGTACTAGTACAGAAGACAATGTAGTAGCCAGT ACTAGTACCGATGATAATGCAGTAGCCAGTACTAGTACAGAAGACAATGCAGTAGCCAGT ACTAGTACCGATGATAATGCAGTAGCCAGTACTAGTACAGAAGACATTGTAGTAGTCGGT ACTAGTACCGATGACAATGATAAAAATGACGATAAATATAATTGTTTAGACAAATTAAAT ATTAAAGGCTGTGTATCTTTGGCGGGTATGGTGTCTTTTGAAAGAATAGCGCAACCAGGG ACATATTTATTCAATTATGTTTATTTGCCTGTAACACATTTCTTATCTTATATTGCACCT AATCTGGAAACTAAGTCAGAATTGCCATATAAAGGTTACCCATTTATCGATAATTTATGT AAACTAGATAAATATAGAGGTAATCGTGGAGTTACAGTTAAATGTGTATATGAGCTTATA AAAGCAATGGGCGCGTTGAACGATGATATTAATTATATACCAAAGGATATTCCTATATTA TTTGTGCATGCAAAAGGAGATAGCATTTGTTATTACAAAGGTGTAGAGATGTTTTATGAT AGATTACATTCTGATAATAAAGAATTATTTCCAGTCGATAACATGGATCATTCTATAACA TTAGAACCCGGGAATGAGCAAGTTTTAGAAAAAATTATTAAATGGTTAAATAATTTGAAA AATAACAATAAAAATGCAATAGAAAACCAAGAATAA
  • Download Fasta

  • Fasta :-

    MGETELDNDELRKTVFNIDGNPKVGHFYNKDGLLLKTYRWPVKKAAGIVLLLHGLKGHAR FTYLKPNAEVIDNNEVLVIDDDNYYVYSGSWVEKFNQNEYSVYAMDLQGHGESEARKNLR GHFKRFNDLVDDVLQYMNQIQDEIANDNKIDDESYSIVPAKKQKLPMYIIGYSMGGNIAL RILQILNKAKVKNNSKLEDTVIYAKADTLTGDCTNIYDSDNDNDNDNDNDDDDDDDDDDV YYDVYDGDNVNDNNPTNKATNVSEVVDINNVSNDNTTKHYACTYCIANGSTCDNDSVSTT TGGSDIDNFSVSADDSVAASTSTEDNVVASTSTEYNEVPSTSTEDNVVASTSTEDNVVVS TSTEDNEVPSTSTEDNVVASTSTEDNVVVSTSTEDNEVPSTSTEDNEVVSTSTEDNEVPS TSTEDNEVASTSTEDNEVPSTSTEDNVVASTSTEDNVVVSTSTEDNEVPSTSTEDNVVAS TSTEDNVVVSTSTEDTVVPSTSTEDNAVASTSTDDNAIASTSTDDNLIASTSTEDNAVAS TSTEDNAVASTSTEDNVVASTSTDDNAVASTSTEDNAVASTSTDDNAVASTSTEDIVVVG TSTDDNDKNDDKYNCLDKLNIKGCVSLAGMVSFERIAQPGTYLFNYVYLPVTHFLSYIAP NLETKSELPYKGYPFIDNLCKLDKYRGNRGVTVKCVYELIKAMGALNDDINYIPKDIPIL FVHAKGDSICYYKGVEMFYDRLHSDNKELFPVDNMDHSITLEPGNEQVLEKIIKWLNNLK NNNKNAIENQE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0625000312 SNFSVSADDS0.995unspPCHAS_0625000312 SNFSVSADDS0.995unspPCHAS_0625000312 SNFSVSADDS0.995unspPCHAS_0625000322 SAASTSTEDN0.997unspPCHAS_0625000342 SVPSTSTEDN0.998unspPCHAS_0625000352 SVASTSTEDN0.997unspPCHAS_0625000362 SVVSTSTEDN0.998unspPCHAS_0625000372 SVPSTSTEDN0.998unspPCHAS_0625000382 SVASTSTEDN0.997unspPCHAS_0625000392 SVVSTSTEDN0.998unspPCHAS_0625000402 SVPSTSTEDN0.998unspPCHAS_0625000412 SVVSTSTEDN0.998unspPCHAS_0625000422 SVPSTSTEDN0.998unspPCHAS_0625000432 SVASTSTEDN0.998unspPCHAS_0625000442 SVPSTSTEDN0.998unspPCHAS_0625000452 SVASTSTEDN0.997unspPCHAS_0625000462 SVVSTSTEDN0.998unspPCHAS_0625000472 SVPSTSTEDN0.998unspPCHAS_0625000482 SVASTSTEDN0.997unspPCHAS_0625000492 SVVSTSTEDT0.998unspPCHAS_0625000502 SVPSTSTEDN0.997unspPCHAS_0625000512 SVASTSTDDN0.994unspPCHAS_0625000522 SIASTSTDDN0.991unspPCHAS_0625000532 SIASTSTEDN0.996unspPCHAS_0625000542 SVASTSTEDN0.997unspPCHAS_0625000552 SVASTSTEDN0.998unspPCHAS_0625000572 SVASTSTEDN0.997unspPCHAS_0625000582 SVASTSTDDN0.994unspPCHAS_0625000592 SVASTSTEDI0.997unspPCHAS_0625000602 SVVGTSTDDN0.994unspPCHAS_0625000219 SNIYDSDNDN0.997unspPCHAS_0625000304 STTGGSDIDN0.995unsp

PCHAS_000890      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India