PCHAS_0625700 | lysophospholipase, putative

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_0625700OTHER0.9999390.0000170.000044
No Results

  • Fasta :-

    >PCHAS_0625700 MEEIELNNDELRNTKCNLDGDPKIDWIHNKNGLFLKTYRWIAKNATGIILLIHGFRVHTQ LTFMRKNLKIANGNEELVVDNNNCYIYKDSWIENFNKNGYSVYALDLQGHGESQTWKNIR DNFSSFDDLVDDVIQYMHHIQDEISNDNQTDDESHDIVTTKKKKLPMYIIGHSMGGNIAL RILQLLNKEKGNDIDTGESNNYKNIYTMLNNSTNINEIGNDMNNSKDYDSDNSCASTSDT TNAIASDKHEGCYNCLDKFNIKGCVSLSGMIRIKSKRDPGNKSYMYFYLPIIKFLSCFAP RARISLESRYNMFGYYGNKFRLYKILNINQTKFKCMSELIKATITLDRNIKYMPKDVPLL FVHSQDDSICSYERAVAFYNKVNVSKKELYPVDGMDHGTPTRPGNEEILKKIIDWISDLR SKDEDE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0625700.fa Sequence name : PCHAS_0625700 Sequence length : 426 VALUES OF COMPUTED PARAMETERS Coef20 : 3.036 CoefTot : 0.000 ChDiff : -5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.176 1.200 0.108 0.558 MesoH : -1.091 0.041 -0.479 0.086 MuHd_075 : 15.081 11.325 4.532 3.380 MuHd_095 : 14.617 10.232 4.089 2.934 MuHd_100 : 23.620 13.734 4.608 4.288 MuHd_105 : 28.744 13.267 4.681 4.987 Hmax_075 : -13.650 -1.633 -5.232 0.082 Hmax_095 : -11.900 0.800 -4.197 0.530 Hmax_100 : -6.300 3.100 -4.619 1.290 Hmax_105 : 3.700 6.300 -1.706 2.630 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9806 0.0194 DFMC : 0.9804 0.0196
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 426 PCHAS_0625700 MEEIELNNDELRNTKCNLDGDPKIDWIHNKNGLFLKTYRWIAKNATGIILLIHGFRVHTQLTFMRKNLKIANGNEELVVD 80 NNNCYIYKDSWIENFNKNGYSVYALDLQGHGESQTWKNIRDNFSSFDDLVDDVIQYMHHIQDEISNDNQTDDESHDIVTT 160 KKKKLPMYIIGHSMGGNIALRILQLLNKEKGNDIDTGESNNYKNIYTMLNNSTNINEIGNDMNNSKDYDSDNSCASTSDT 240 TNAIASDKHEGCYNCLDKFNIKGCVSLSGMIRIKSKRDPGNKSYMYFYLPIIKFLSCFAPRARISLESRYNMFGYYGNKF 320 RLYKILNINQTKFKCMSELIKATITLDRNIKYMPKDVPLLFVHSQDDSICSYERAVAFYNKVNVSKKELYPVDGMDHGTP 400 TRPGNEEILKKIIDWISDLRSKDEDE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .......................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0625700 12 LNNDELR|NT 0.100 . PCHAS_0625700 15 DELRNTK|CN 0.099 . PCHAS_0625700 23 NLDGDPK|ID 0.058 . PCHAS_0625700 30 IDWIHNK|NG 0.058 . PCHAS_0625700 36 KNGLFLK|TY 0.067 . PCHAS_0625700 39 LFLKTYR|WI 0.091 . PCHAS_0625700 43 TYRWIAK|NA 0.086 . PCHAS_0625700 56 LLIHGFR|VH 0.081 . PCHAS_0625700 65 TQLTFMR|KN 0.091 . PCHAS_0625700 66 QLTFMRK|NL 0.083 . PCHAS_0625700 69 FMRKNLK|IA 0.070 . PCHAS_0625700 88 NNCYIYK|DS 0.076 . PCHAS_0625700 97 WIENFNK|NG 0.059 . PCHAS_0625700 117 GESQTWK|NI 0.093 . PCHAS_0625700 120 QTWKNIR|DN 0.127 . PCHAS_0625700 161 HDIVTTK|KK 0.059 . PCHAS_0625700 162 DIVTTKK|KK 0.076 . PCHAS_0625700 163 IVTTKKK|KL 0.098 . PCHAS_0625700 164 VTTKKKK|LP 0.095 . PCHAS_0625700 181 GGNIALR|IL 0.076 . PCHAS_0625700 188 ILQLLNK|EK 0.067 . PCHAS_0625700 190 QLLNKEK|GN 0.070 . PCHAS_0625700 203 GESNNYK|NI 0.086 . PCHAS_0625700 226 NDMNNSK|DY 0.071 . PCHAS_0625700 248 NAIASDK|HE 0.064 . PCHAS_0625700 258 CYNCLDK|FN 0.076 . PCHAS_0625700 262 LDKFNIK|GC 0.060 . PCHAS_0625700 272 SLSGMIR|IK 0.113 . PCHAS_0625700 274 SGMIRIK|SK 0.085 . PCHAS_0625700 276 MIRIKSK|RD 0.063 . PCHAS_0625700 277 IRIKSKR|DP 0.395 . PCHAS_0625700 282 KRDPGNK|SY 0.069 . PCHAS_0625700 293 FYLPIIK|FL 0.058 . PCHAS_0625700 301 LSCFAPR|AR 0.087 . PCHAS_0625700 303 CFAPRAR|IS 0.089 . PCHAS_0625700 309 RISLESR|YN 0.117 . PCHAS_0625700 319 FGYYGNK|FR 0.056 . PCHAS_0625700 321 YYGNKFR|LY 0.081 . PCHAS_0625700 324 NKFRLYK|IL 0.144 . PCHAS_0625700 332 LNINQTK|FK 0.075 . PCHAS_0625700 334 INQTKFK|CM 0.077 . PCHAS_0625700 341 CMSELIK|AT 0.073 . PCHAS_0625700 348 ATITLDR|NI 0.090 . PCHAS_0625700 351 TLDRNIK|YM 0.109 . PCHAS_0625700 355 NIKYMPK|DV 0.078 . PCHAS_0625700 374 SICSYER|AV 0.096 . PCHAS_0625700 381 AVAFYNK|VN 0.056 . PCHAS_0625700 386 NKVNVSK|KE 0.060 . PCHAS_0625700 387 KVNVSKK|EL 0.152 . PCHAS_0625700 402 DHGTPTR|PG 0.074 . PCHAS_0625700 410 GNEEILK|KI 0.067 . PCHAS_0625700 411 NEEILKK|II 0.109 . PCHAS_0625700 420 DWISDLR|SK 0.104 . PCHAS_0625700 422 ISDLRSK|DE 0.068 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0625700 ATGGAAGAAATTGAATTGAATAACGATGAATTAAGAAATACAAAATGCAATTTAGATGGT GATCCTAAAATAGATTGGATCCATAATAAAAATGGTTTATTTTTAAAAACATATAGATGG ATAGCTAAAAATGCTACAGGAATTATATTGTTAATACATGGATTCAGAGTTCATACTCAA TTAACTTTTATGAGAAAAAATTTAAAAATAGCAAATGGCAATGAAGAGTTAGTAGTGGAC AATAATAATTGCTATATTTATAAAGATAGTTGGATTGAAAATTTTAATAAAAATGGTTAT TCAGTATATGCACTAGATTTGCAAGGACATGGGGAATCACAAACATGGAAAAATATAAGA GACAATTTTAGTTCTTTTGATGATCTAGTTGATGATGTAATACAATATATGCATCATATT CAAGATGAAATCTCAAATGATAATCAAACAGATGACGAATCTCATGATATAGTAACAACT AAAAAAAAAAAACTTCCTATGTATATTATTGGACATTCGATGGGAGGAAATATTGCTTTA AGAATATTACAATTATTAAATAAAGAAAAAGGAAATGACATTGATACTGGAGAATCAAAT AACTATAAAAATATTTATACCATGCTAAACAATTCTACTAATATTAATGAAATTGGAAAT GATATGAATAATTCTAAAGATTATGATTCCGATAATTCCTGTGCTAGCACCTCTGATACG ACAAATGCTATTGCTAGTGACAAACATGAAGGCTGCTATAATTGTTTAGATAAATTCAAT ATCAAAGGTTGCGTGTCTTTATCTGGTATGATAAGAATAAAATCAAAACGGGATCCTGGA AACAAATCATATATGTATTTTTATTTACCTATAATAAAATTCTTGTCTTGTTTCGCACCT CGTGCACGAATTTCATTAGAATCACGCTATAACATGTTTGGATATTATGGTAATAAGTTT AGACTTTATAAAATTCTAAATATTAATCAAACAAAATTTAAATGTATGTCTGAACTTATA AAAGCAACGATCACATTGGATCGTAATATTAAATATATGCCAAAAGATGTTCCTTTATTA TTTGTGCATTCACAAGACGATAGTATTTGTTCTTATGAACGGGCAGTTGCGTTTTATAAT AAAGTAAATGTTAGTAAAAAAGAATTATATCCTGTTGATGGTATGGATCATGGTACACCT ACAAGGCCAGGGAATGAAGAAATTTTAAAAAAAATTATTGATTGGATTTCTGATTTAAGA AGCAAAGATGAAGATGAATAA
  • Download Fasta

  • Fasta :-

    MEEIELNNDELRNTKCNLDGDPKIDWIHNKNGLFLKTYRWIAKNATGIILLIHGFRVHTQ LTFMRKNLKIANGNEELVVDNNNCYIYKDSWIENFNKNGYSVYALDLQGHGESQTWKNIR DNFSSFDDLVDDVIQYMHHIQDEISNDNQTDDESHDIVTTKKKKLPMYIIGHSMGGNIAL RILQLLNKEKGNDIDTGESNNYKNIYTMLNNSTNINEIGNDMNNSKDYDSDNSCASTSDT TNAIASDKHEGCYNCLDKFNIKGCVSLSGMIRIKSKRDPGNKSYMYFYLPIIKFLSCFAP RARISLESRYNMFGYYGNKFRLYKILNINQTKFKCMSELIKATITLDRNIKYMPKDVPLL FVHSQDDSICSYERAVAFYNKVNVSKKELYPVDGMDHGTPTRPGNEEILKKIIDWISDLR SKDEDE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0625700385 SKVNVSKKEL0.994unspPCHAS_0625700385 SKVNVSKKEL0.994unspPCHAS_0625700385 SKVNVSKKEL0.994unspPCHAS_0625700421 SSDLRSKDED0.995unspPCHAS_0625700236 SNSCASTSDT0.996unspPCHAS_0625700275 SIRIKSKRDP0.997unsp

PCHAS_000820      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India