PCHAS_0716500 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_0716500OTHER0.9896530.0101360.000210
No Results

  • Fasta :-

    >PCHAS_0716500 MFHLYELLMFFLRHPRDKYDEAFLGPIFLHFYDKNYYRRDIIIKNRRGEKLRCCFFTPFN YSENTPCVIYTHSTSSCQLEVLDILHILLVCECSIFSFDCAGCGLSDGYYSTKGWNETQD LYLILNHLRNVEKIKNFILWGKHSGAASSIITAALDRNIKMLILESPFVSLIELYKTTFN LCAKKKKEIIFKNICLYFTRRKIKRKFNYDINNVCPVFFIEDITIPTIYIISKSDSIVHP AHSLYLAHKQKKAKKIIYIAEKGTQPHEAYTYDSKLIIAMKSILYSHNFENDIKDKIFDL STYYKLFTFLREKYAYEFDYIDKLITKKINQKNKIIDKVKKFVCFKYQSKISLSSSTCLN QSTVDSLRTSKVYENEYTFQTEENNNDFLQECDQINDSGFSNDYQDVFSDEDNMLDNPPE NKHIDKDCNIEKFNRLNEANKKFEEIQGTTERPSKLLHMQSSRSSLKSNKKTYKKSLTWN SNLQSSITYFKEDCPLSLQKNE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0716500.fa Sequence name : PCHAS_0716500 Sequence length : 502 VALUES OF COMPUTED PARAMETERS Coef20 : 3.592 CoefTot : -0.274 ChDiff : 10 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.953 1.947 0.437 0.644 MesoH : -0.142 0.398 -0.153 0.250 MuHd_075 : 17.947 5.171 4.156 3.023 MuHd_095 : 27.883 17.457 8.749 5.000 MuHd_100 : 33.103 18.645 9.035 6.148 MuHd_105 : 33.276 17.065 7.720 6.788 Hmax_075 : 7.700 3.150 -2.147 3.407 Hmax_095 : 11.700 13.200 0.279 5.320 Hmax_100 : 14.600 13.200 1.595 5.520 Hmax_105 : 15.200 11.300 1.108 5.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9777 0.0223 DFMC : 0.9953 0.0047
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 502 PCHAS_0716500 MFHLYELLMFFLRHPRDKYDEAFLGPIFLHFYDKNYYRRDIIIKNRRGEKLRCCFFTPFNYSENTPCVIYTHSTSSCQLE 80 VLDILHILLVCECSIFSFDCAGCGLSDGYYSTKGWNETQDLYLILNHLRNVEKIKNFILWGKHSGAASSIITAALDRNIK 160 MLILESPFVSLIELYKTTFNLCAKKKKEIIFKNICLYFTRRKIKRKFNYDINNVCPVFFIEDITIPTIYIISKSDSIVHP 240 AHSLYLAHKQKKAKKIIYIAEKGTQPHEAYTYDSKLIIAMKSILYSHNFENDIKDKIFDLSTYYKLFTFLREKYAYEFDY 320 IDKLITKKINQKNKIIDKVKKFVCFKYQSKISLSSSTCLNQSTVDSLRTSKVYENEYTFQTEENNNDFLQECDQINDSGF 400 SNDYQDVFSDEDNMLDNPPENKHIDKDCNIEKFNRLNEANKKFEEIQGTTERPSKLLHMQSSRSSLKSNKKTYKKSLTWN 480 SNLQSSITYFKEDCPLSLQKNE 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0716500 13 LLMFFLR|HP 0.089 . PCHAS_0716500 16 FFLRHPR|DK 0.264 . PCHAS_0716500 18 LRHPRDK|YD 0.095 . PCHAS_0716500 34 FLHFYDK|NY 0.061 . PCHAS_0716500 38 YDKNYYR|RD 0.076 . PCHAS_0716500 39 DKNYYRR|DI 0.236 . PCHAS_0716500 44 RRDIIIK|NR 0.059 . PCHAS_0716500 46 DIIIKNR|RG 0.086 . PCHAS_0716500 47 IIIKNRR|GE 0.089 . PCHAS_0716500 50 KNRRGEK|LR 0.098 . PCHAS_0716500 52 RRGEKLR|CC 0.102 . PCHAS_0716500 113 DGYYSTK|GW 0.071 . PCHAS_0716500 129 LILNHLR|NV 0.123 . PCHAS_0716500 133 HLRNVEK|IK 0.072 . PCHAS_0716500 135 RNVEKIK|NF 0.071 . PCHAS_0716500 142 NFILWGK|HS 0.073 . PCHAS_0716500 157 ITAALDR|NI 0.079 . PCHAS_0716500 160 ALDRNIK|ML 0.092 . PCHAS_0716500 176 SLIELYK|TT 0.058 . PCHAS_0716500 184 TFNLCAK|KK 0.065 . PCHAS_0716500 185 FNLCAKK|KK 0.102 . PCHAS_0716500 186 NLCAKKK|KE 0.092 . PCHAS_0716500 187 LCAKKKK|EI 0.129 . PCHAS_0716500 192 KKEIIFK|NI 0.066 . PCHAS_0716500 200 ICLYFTR|RK 0.072 . PCHAS_0716500 201 CLYFTRR|KI 0.131 . PCHAS_0716500 202 LYFTRRK|IK 0.070 . PCHAS_0716500 204 FTRRKIK|RK 0.116 . PCHAS_0716500 205 TRRKIKR|KF 0.238 . PCHAS_0716500 206 RRKIKRK|FN 0.150 . PCHAS_0716500 233 TIYIISK|SD 0.103 . PCHAS_0716500 249 SLYLAHK|QK 0.064 . PCHAS_0716500 251 YLAHKQK|KA 0.085 . PCHAS_0716500 252 LAHKQKK|AK 0.132 . PCHAS_0716500 254 HKQKKAK|KI 0.088 . PCHAS_0716500 255 KQKKAKK|II 0.156 . PCHAS_0716500 262 IIYIAEK|GT 0.074 . PCHAS_0716500 275 AYTYDSK|LI 0.061 . PCHAS_0716500 281 KLIIAMK|SI 0.080 . PCHAS_0716500 294 NFENDIK|DK 0.065 . PCHAS_0716500 296 ENDIKDK|IF 0.062 . PCHAS_0716500 305 DLSTYYK|LF 0.061 . PCHAS_0716500 311 KLFTFLR|EK 0.100 . PCHAS_0716500 313 FTFLREK|YA 0.060 . PCHAS_0716500 323 EFDYIDK|LI 0.065 . PCHAS_0716500 327 IDKLITK|KI 0.066 . PCHAS_0716500 328 DKLITKK|IN 0.079 . PCHAS_0716500 332 TKKINQK|NK 0.060 . PCHAS_0716500 334 KINQKNK|II 0.100 . PCHAS_0716500 338 KNKIIDK|VK 0.055 . PCHAS_0716500 340 KIIDKVK|KF 0.059 . PCHAS_0716500 341 IIDKVKK|FV 0.196 . PCHAS_0716500 346 KKFVCFK|YQ 0.073 . PCHAS_0716500 350 CFKYQSK|IS 0.056 . PCHAS_0716500 368 STVDSLR|TS 0.085 . PCHAS_0716500 371 DSLRTSK|VY 0.106 . PCHAS_0716500 422 DNPPENK|HI 0.065 . PCHAS_0716500 426 ENKHIDK|DC 0.074 . PCHAS_0716500 432 KDCNIEK|FN 0.068 . PCHAS_0716500 435 NIEKFNR|LN 0.088 . PCHAS_0716500 441 RLNEANK|KF 0.082 . PCHAS_0716500 442 LNEANKK|FE 0.144 . PCHAS_0716500 452 IQGTTER|PS 0.076 . PCHAS_0716500 455 TTERPSK|LL 0.118 . PCHAS_0716500 463 LHMQSSR|SS 0.133 . PCHAS_0716500 467 SSRSSLK|SN 0.084 . PCHAS_0716500 470 SSLKSNK|KT 0.068 . PCHAS_0716500 471 SLKSNKK|TY 0.115 . PCHAS_0716500 474 SNKKTYK|KS 0.066 . PCHAS_0716500 475 NKKTYKK|SL 0.139 . PCHAS_0716500 491 SSITYFK|ED 0.061 . PCHAS_0716500 500 CPLSLQK|NE 0.058 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0716500 ATGTTTCACTTATACGAATTGCTTATGTTTTTTTTAAGACATCCAAGAGATAAATATGAT GAAGCATTTTTAGGTCCGATATTTTTGCATTTTTATGATAAAAACTATTATAGAAGAGAT ATAATAATAAAAAATAGACGAGGGGAAAAATTAAGATGCTGTTTTTTTACACCATTTAAT TATAGTGAAAATACTCCTTGTGTTATATACACACATTCTACTAGTAGTTGTCAATTAGAA GTTTTAGATATATTGCATATTCTTTTAGTTTGTGAATGCTCGATTTTTTCATTTGATTGT GCAGGTTGTGGATTATCAGATGGATATTATTCAACGAAAGGTTGGAATGAAACTCAAGAT TTATACTTAATTTTAAACCATTTAAGAAATGTAGAAAAAATTAAAAATTTCATTCTTTGG GGGAAGCATTCTGGAGCAGCCAGTTCCATAATAACGGCCGCTCTGGATCGAAATATAAAG ATGCTGATTTTGGAATCCCCTTTTGTGTCCCTAATCGAATTGTACAAAACCACCTTTAAC TTGTGTGCAAAAAAAAAGAAAGAAATAATTTTCAAAAATATTTGTTTATATTTCACAAGA AGAAAAATAAAAAGAAAATTTAATTACGATATAAATAATGTATGTCCAGTATTTTTTATT GAAGACATAACAATTCCAACGATTTACATAATCTCTAAAAGTGATAGTATTGTCCACCCT GCTCATTCATTATATTTAGCGCATAAACAAAAAAAAGCGAAAAAAATAATTTATATAGCT GAAAAAGGAACACAACCACATGAAGCTTATACATATGATAGTAAATTAATTATAGCTATG AAATCTATTTTATATAGTCACAATTTTGAAAATGATATAAAGGATAAAATATTTGATCTA TCTACATATTATAAATTATTTACATTTTTAAGAGAAAAATATGCATATGAATTTGATTAT ATTGATAAATTAATAACTAAAAAAATTAATCAAAAAAATAAAATAATTGATAAAGTAAAA AAGTTTGTTTGCTTTAAGTATCAATCAAAGATTTCGCTTAGTTCGTCTACCTGTTTAAAC CAATCCACTGTGGATTCTTTGCGCACCTCAAAAGTCTACGAAAATGAATATACGTTTCAG ACCGAAGAAAACAACAATGATTTCCTACAAGAATGTGATCAAATTAATGATTCAGGATTT TCTAACGATTACCAAGATGTATTTTCAGATGAAGATAATATGTTAGATAATCCACCTGAA AATAAACATATAGACAAAGATTGTAATATAGAAAAATTCAACAGATTAAATGAAGCTAAT AAAAAATTTGAAGAAATCCAAGGAACCACCGAAAGACCCTCCAAACTGTTGCATATGCAA AGCTCCCGAAGTTCTTTAAAATCAAATAAAAAGACTTATAAAAAGTCTCTAACATGGAAT AGCAACTTGCAAAGTTCTATTACATATTTCAAGGAAGATTGCCCATTAAGCCTCCAAAAA AATGAATAG
  • Download Fasta

  • Fasta :-

    MFHLYELLMFFLRHPRDKYDEAFLGPIFLHFYDKNYYRRDIIIKNRRGEKLRCCFFTPFN YSENTPCVIYTHSTSSCQLEVLDILHILLVCECSIFSFDCAGCGLSDGYYSTKGWNETQD LYLILNHLRNVEKIKNFILWGKHSGAASSIITAALDRNIKMLILESPFVSLIELYKTTFN LCAKKKKEIIFKNICLYFTRRKIKRKFNYDINNVCPVFFIEDITIPTIYIISKSDSIVHP AHSLYLAHKQKKAKKIIYIAEKGTQPHEAYTYDSKLIIAMKSILYSHNFENDIKDKIFDL STYYKLFTFLREKYAYEFDYIDKLITKKINQKNKIIDKVKKFVCFKYQSKISLSSSTCLN QSTVDSLRTSKVYENEYTFQTEENNNDFLQECDQINDSGFSNDYQDVFSDEDNMLDNPPE NKHIDKDCNIEKFNRLNEANKKFEEIQGTTERPSKLLHMQSSRSSLKSNKKTYKKSLTWN SNLQSSITYFKEDCPLSLQKNE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0716500468 SSSLKSNKKT0.995unspPCHAS_0716500468 SSSLKSNKKT0.995unspPCHAS_0716500468 SSSLKSNKKT0.995unspPCHAS_0716500409 SQDVFSDEDN0.997unspPCHAS_0716500465 SSSRSSLKSN0.998unsp

PCHAS_071650      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India