PCHAS_0833400 | M18 aspartyl aminopeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004177      GO:0008270      

  • Computed_GO_Functions:  aminopeptidase activity      zinc ion binding      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0833400OTHER0.9996330.0000720.000294
No Results

  • Fasta :-

    >PCHAS_0833400 MDKKAREYAQEAIKFIQRSGSSFMACKNLREKLESHGLIHIKEGDQWKLQKNQGYVLCKE NRNICSFFVGKNFNINNGSILISIGHIDSCALKISPNNKVTKDQISQLNVECYGSGLWHT WFDRSLGLSGQVVYKKDNKLVEKIIQINKSVLFLPSLAIHLQNRTRYDFSVKVNYENHLK PILSTVLYEKLIKGNENISEKNNSSTDDEDKNSKNINSSPLLYLLANELKCKEDDILDFE LCLMDTNQPCFTGVYEEFIEGARFDNLLGTFSVFEAYIELIKMIKSENNKNEPLENNLYI CIGYDHEEIGSLSEIGAQSYFTKSFIERIIGNIFKNELKNNETTVDEIYGSLSSRSLILN VDMAHCGHPNYPETIQQSHHLRFHDGIAIKYNTNKNYVTSPYYACLLKRTFELYQNQYNQ KIKYQNFMIKNDTPCGSTVGSMVASNLSMPGMDIGISQLAMHSIREIAAIHDIYYLIKGV FAFYAYYNQVLSTCVHDA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0833400.fa Sequence name : PCHAS_0833400 Sequence length : 498 VALUES OF COMPUTED PARAMETERS Coef20 : 3.699 CoefTot : 0.000 ChDiff : -4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.259 1.376 0.111 0.604 MesoH : -0.028 0.440 -0.242 0.282 MuHd_075 : 17.213 7.752 3.845 2.583 MuHd_095 : 58.732 31.897 15.671 12.031 MuHd_100 : 53.340 31.367 15.370 11.306 MuHd_105 : 37.166 25.071 12.371 8.169 Hmax_075 : -3.033 1.050 -4.332 0.852 Hmax_095 : 8.400 10.063 0.594 4.121 Hmax_100 : 14.300 13.300 1.949 5.360 Hmax_105 : 2.800 10.733 -0.121 4.153 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5168 0.4832 DFMC : 0.6769 0.3231
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 498 PCHAS_0833400 MDKKAREYAQEAIKFIQRSGSSFMACKNLREKLESHGLIHIKEGDQWKLQKNQGYVLCKENRNICSFFVGKNFNINNGSI 80 LISIGHIDSCALKISPNNKVTKDQISQLNVECYGSGLWHTWFDRSLGLSGQVVYKKDNKLVEKIIQINKSVLFLPSLAIH 160 LQNRTRYDFSVKVNYENHLKPILSTVLYEKLIKGNENISEKNNSSTDDEDKNSKNINSSPLLYLLANELKCKEDDILDFE 240 LCLMDTNQPCFTGVYEEFIEGARFDNLLGTFSVFEAYIELIKMIKSENNKNEPLENNLYICIGYDHEEIGSLSEIGAQSY 320 FTKSFIERIIGNIFKNELKNNETTVDEIYGSLSSRSLILNVDMAHCGHPNYPETIQQSHHLRFHDGIAIKYNTNKNYVTS 400 PYYACLLKRTFELYQNQYNQKIKYQNFMIKNDTPCGSTVGSMVASNLSMPGMDIGISQLAMHSIREIAAIHDIYYLIKGV 480 FAFYAYYNQVLSTCVHDA 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0833400 3 ----MDK|KA 0.064 . PCHAS_0833400 4 ---MDKK|AR 0.104 . PCHAS_0833400 6 -MDKKAR|EY 0.103 . PCHAS_0833400 14 YAQEAIK|FI 0.073 . PCHAS_0833400 18 AIKFIQR|SG 0.104 . PCHAS_0833400 27 SSFMACK|NL 0.074 . PCHAS_0833400 30 MACKNLR|EK 0.079 . PCHAS_0833400 32 CKNLREK|LE 0.074 . PCHAS_0833400 42 HGLIHIK|EG 0.067 . PCHAS_0833400 48 KEGDQWK|LQ 0.062 . PCHAS_0833400 51 DQWKLQK|NQ 0.072 . PCHAS_0833400 59 QGYVLCK|EN 0.063 . PCHAS_0833400 62 VLCKENR|NI 0.092 . PCHAS_0833400 71 CSFFVGK|NF 0.065 . PCHAS_0833400 93 IDSCALK|IS 0.061 . PCHAS_0833400 99 KISPNNK|VT 0.084 . PCHAS_0833400 102 PNNKVTK|DQ 0.101 . PCHAS_0833400 124 WHTWFDR|SL 0.156 . PCHAS_0833400 135 SGQVVYK|KD 0.069 . PCHAS_0833400 136 GQVVYKK|DN 0.134 . PCHAS_0833400 139 VYKKDNK|LV 0.077 . PCHAS_0833400 143 DNKLVEK|II 0.067 . PCHAS_0833400 149 KIIQINK|SV 0.073 . PCHAS_0833400 164 AIHLQNR|TR 0.075 . PCHAS_0833400 166 HLQNRTR|YD 0.107 . PCHAS_0833400 172 RYDFSVK|VN 0.056 . PCHAS_0833400 180 NYENHLK|PI 0.057 . PCHAS_0833400 190 STVLYEK|LI 0.064 . PCHAS_0833400 193 LYEKLIK|GN 0.060 . PCHAS_0833400 201 NENISEK|NN 0.064 . PCHAS_0833400 211 STDDEDK|NS 0.059 . PCHAS_0833400 214 DEDKNSK|NI 0.058 . PCHAS_0833400 230 LLANELK|CK 0.068 . PCHAS_0833400 232 ANELKCK|ED 0.064 . PCHAS_0833400 263 EFIEGAR|FD 0.070 . PCHAS_0833400 282 AYIELIK|MI 0.057 . PCHAS_0833400 285 ELIKMIK|SE 0.068 . PCHAS_0833400 290 IKSENNK|NE 0.057 . PCHAS_0833400 323 AQSYFTK|SF 0.101 . PCHAS_0833400 328 TKSFIER|II 0.200 . PCHAS_0833400 335 IIGNIFK|NE 0.060 . PCHAS_0833400 339 IFKNELK|NN 0.063 . PCHAS_0833400 355 YGSLSSR|SL 0.157 . PCHAS_0833400 382 QQSHHLR|FH 0.148 . PCHAS_0833400 390 HDGIAIK|YN 0.066 . PCHAS_0833400 395 IKYNTNK|NY 0.064 . PCHAS_0833400 408 YYACLLK|RT 0.057 . PCHAS_0833400 409 YACLLKR|TF 0.190 . PCHAS_0833400 421 QNQYNQK|IK 0.071 . PCHAS_0833400 423 QYNQKIK|YQ 0.076 . PCHAS_0833400 430 YQNFMIK|ND 0.077 . PCHAS_0833400 465 LAMHSIR|EI 0.116 . PCHAS_0833400 478 DIYYLIK|GV 0.077 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0833400 ATGGATAAGAAGGCAAGAGAATATGCTCAAGAGGCCATCAAGTTTATTCAAAGAAGTGGA AGCAGTTTTATGGCATGTAAAAATTTAAGAGAGAAATTAGAAAGCCATGGTTTGATACAT ATAAAAGAAGGAGATCAATGGAAATTGCAAAAAAATCAAGGATATGTTTTATGTAAAGAA AATAGAAATATATGTAGTTTTTTTGTTGGAAAAAATTTTAATATTAATAATGGGTCGATC CTAATATCAATTGGTCATATTGATTCATGTGCTTTAAAAATATCACCAAACAACAAAGTT ACAAAAGATCAAATAAGTCAATTAAATGTTGAATGTTATGGATCAGGATTATGGCACACC TGGTTTGATAGAAGTTTAGGTTTGTCAGGACAAGTTGTATATAAAAAAGATAATAAATTA GTTGAAAAGATTATACAAATTAATAAATCGGTTTTATTTTTACCAAGTCTAGCTATACAT TTACAAAACAGAACAAGGTATGATTTTTCAGTTAAGGTAAATTATGAAAATCATTTAAAG CCAATCTTATCCACTGTATTGTATGAAAAACTTATAAAAGGAAATGAAAATATTTCAGAA AAAAATAACTCGAGTACTGATGATGAAGACAAAAATAGTAAAAACATTAACTCGTCACCA CTTCTTTATCTTTTAGCAAATGAATTAAAATGTAAAGAGGACGATATATTAGATTTTGAG TTATGCTTAATGGATACAAATCAACCTTGCTTTACTGGTGTATATGAAGAATTTATAGAA GGGGCTAGATTTGATAACTTGCTTGGAACCTTTAGCGTTTTTGAAGCTTATATAGAATTA ATTAAAATGATAAAAAGTGAAAACAACAAAAATGAACCTTTAGAAAATAATTTATATATA TGTATTGGATATGATCATGAAGAAATTGGATCGCTTAGTGAAATAGGAGCTCAATCTTAT TTTACTAAAAGTTTTATTGAAAGAATAATAGGAAATATATTTAAGAATGAATTAAAAAAT AATGAAACAACTGTAGATGAAATATATGGAAGTTTATCAAGTAGATCTCTTATATTAAAT GTTGATATGGCTCATTGTGGTCATCCAAATTATCCAGAAACAATTCAACAAAGTCACCAT TTACGTTTTCATGATGGTATTGCTATAAAATACAATACTAACAAAAATTATGTAACATCA CCCTATTATGCTTGTTTATTAAAAAGAACATTTGAACTATACCAAAATCAATATAATCAA AAAATTAAATATCAAAATTTTATGATTAAAAATGATACTCCATGTGGTAGTACAGTTGGA TCTATGGTTGCATCAAACTTATCAATGCCAGGTATGGATATTGGAATATCTCAGCTAGCT ATGCATTCAATAAGAGAAATTGCAGCTATTCATGATATTTATTATTTGATTAAAGGTGTA TTCGCTTTCTATGCATATTACAATCAAGTTCTCTCCACATGTGTTCATGACGCATAA
  • Download Fasta

  • Fasta :-

    MDKKAREYAQEAIKFIQRSGSSFMACKNLREKLESHGLIHIKEGDQWKLQKNQGYVLCKE NRNICSFFVGKNFNINNGSILISIGHIDSCALKISPNNKVTKDQISQLNVECYGSGLWHT WFDRSLGLSGQVVYKKDNKLVEKIIQINKSVLFLPSLAIHLQNRTRYDFSVKVNYENHLK PILSTVLYEKLIKGNENISEKNNSSTDDEDKNSKNINSSPLLYLLANELKCKEDDILDFE LCLMDTNQPCFTGVYEEFIEGARFDNLLGTFSVFEAYIELIKMIKSENNKNEPLENNLYI CIGYDHEEIGSLSEIGAQSYFTKSFIERIIGNIFKNELKNNETTVDEIYGSLSSRSLILN VDMAHCGHPNYPETIQQSHHLRFHDGIAIKYNTNKNYVTSPYYACLLKRTFELYQNQYNQ KIKYQNFMIKNDTPCGSTVGSMVASNLSMPGMDIGISQLAMHSIREIAAIHDIYYLIKGV FAFYAYYNQVLSTCVHDA

  • title: metal binding site
  • coordinates: H86,D265,E307,E308,D362,H462
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0833400205 SKNNSSTDDE0.995unspPCHAS_0833400205 SKNNSSTDDE0.995unspPCHAS_0833400205 SKNNSSTDDE0.995unspPCHAS_0833400199 SNENISEKNN0.992unspPCHAS_0833400204 SEKNNSSTDD0.997unsp

PCHAS_083340      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India