PCHAS_0908600 | Josephin domain-containing protein, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0908600OTHER0.9999610.0000050.000034
No Results

  • Fasta :-

    >PCHAS_0908600 MCRYGIHKIETEKGPINVYFEKQSKLYCLVHTINNILQAHVYSPQDFREFENNFDYTNLN NNTSDDNNTINENNNKSADLNIKDTLNFENIFSYIKRGINYFGNFNIDVLYFFVSKHNIE LNWVDNKEIFKKVNQNSDCLSLFSDSVLNDPKLIAFVINLVKINFINIYKHRHFYTIRKI SGMWFVLDSSHSKPVLLPTSQEINKHLINIVKDNNFTNRDNYIIQVFKNYEK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0908600.fa Sequence name : PCHAS_0908600 Sequence length : 232 VALUES OF COMPUTED PARAMETERS Coef20 : 3.211 CoefTot : -0.624 ChDiff : 1 ZoneTo : 9 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.671 1.776 -0.040 0.638 MesoH : -0.765 0.282 -0.492 0.193 MuHd_075 : 37.306 15.756 10.292 7.555 MuHd_095 : 8.535 11.636 3.539 3.084 MuHd_100 : 16.811 13.625 5.229 3.921 MuHd_105 : 22.896 16.650 7.616 4.674 Hmax_075 : 0.350 3.617 -0.952 3.477 Hmax_095 : 1.838 8.838 0.027 2.914 Hmax_100 : -1.300 8.200 -0.105 2.730 Hmax_105 : 4.783 14.117 2.843 4.935 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9452 0.0548 DFMC : 0.9729 0.0271
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 232 PCHAS_0908600 MCRYGIHKIETEKGPINVYFEKQSKLYCLVHTINNILQAHVYSPQDFREFENNFDYTNLNNNTSDDNNTINENNNKSADL 80 NIKDTLNFENIFSYIKRGINYFGNFNIDVLYFFVSKHNIELNWVDNKEIFKKVNQNSDCLSLFSDSVLNDPKLIAFVINL 160 VKINFINIYKHRHFYTIRKISGMWFVLDSSHSKPVLLPTSQEINKHLINIVKDNNFTNRDNYIIQVFKNYEK 240 ................................................................................ 80 ................................................................................ 160 ........................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0908600 3 ----MCR|YG 0.112 . PCHAS_0908600 8 CRYGIHK|IE 0.066 . PCHAS_0908600 13 HKIETEK|GP 0.063 . PCHAS_0908600 22 INVYFEK|QS 0.059 . PCHAS_0908600 25 YFEKQSK|LY 0.056 . PCHAS_0908600 48 YSPQDFR|EF 0.092 . PCHAS_0908600 76 INENNNK|SA 0.095 . PCHAS_0908600 83 SADLNIK|DT 0.072 . PCHAS_0908600 96 NIFSYIK|RG 0.054 . PCHAS_0908600 97 IFSYIKR|GI 0.257 . PCHAS_0908600 116 LYFFVSK|HN 0.059 . PCHAS_0908600 127 LNWVDNK|EI 0.074 . PCHAS_0908600 131 DNKEIFK|KV 0.073 . PCHAS_0908600 132 NKEIFKK|VN 0.091 . PCHAS_0908600 152 SVLNDPK|LI 0.062 . PCHAS_0908600 162 FVINLVK|IN 0.057 . PCHAS_0908600 170 NFINIYK|HR 0.055 . PCHAS_0908600 172 INIYKHR|HF 0.130 . PCHAS_0908600 178 RHFYTIR|KI 0.103 . PCHAS_0908600 179 HFYTIRK|IS 0.081 . PCHAS_0908600 193 LDSSHSK|PV 0.074 . PCHAS_0908600 205 TSQEINK|HL 0.073 . PCHAS_0908600 212 HLINIVK|DN 0.069 . PCHAS_0908600 219 DNNFTNR|DN 0.144 . PCHAS_0908600 228 YIIQVFK|NY 0.069 . PCHAS_0908600 232 VFKNYEK|-- 0.060 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0908600 ATGTGTCGCTATGGAATACATAAAATTGAAACGGAAAAGGGACCAATAAATGTATACTTT GAAAAACAAAGTAAATTATATTGCTTAGTTCATACTATAAATAATATATTGCAGGCGCAT GTATATTCTCCCCAAGATTTTAGAGAATTTGAAAACAACTTTGATTATACAAACCTAAAT AATAACACATCAGACGATAATAATACCATAAATGAAAACAATAATAAATCTGCTGACCTA AATATAAAAGACACACTGAACTTTGAAAACATTTTTTCCTATATTAAAAGAGGAATTAAT TATTTTGGAAATTTTAATATTGATGTTTTATATTTTTTTGTGAGCAAACATAATATTGAA TTGAATTGGGTTGACAATAAAGAAATATTTAAAAAGGTAAATCAAAATAGTGATTGTCTT TCTCTATTTAGTGATAGCGTTTTAAATGACCCAAAGCTAATTGCTTTTGTAATAAACTTG GTTAAAATAAATTTTATAAATATTTACAAGCATAGACATTTTTATACAATAAGAAAAATT TCAGGCATGTGGTTCGTGCTGGATTCCTCACACAGCAAGCCTGTTTTGTTACCTACTAGC CAAGAAATAAACAAACATTTAATTAATATAGTAAAAGATAATAATTTCACTAATCGTGAT AATTATATTATACAAGTTTTTAAAAATTATGAGAAATAA
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  • Fasta :-

    MCRYGIHKIETEKGPINVYFEKQSKLYCLVHTINNILQAHVYSPQDFREFENNFDYTNLN NNTSDDNNTINENNNKSADLNIKDTLNFENIFSYIKRGINYFGNFNIDVLYFFVSKHNIE LNWVDNKEIFKKVNQNSDCLSLFSDSVLNDPKLIAFVINLVKINFINIYKHRHFYTIRKI SGMWFVLDSSHSKPVLLPTSQEINKHLINIVKDNNFTNRDNYIIQVFKNYEK

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PCHAS_090860      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India