PCHAS_0913100 | heat shock protein 101, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0913100SP0.1124990.8413810.046120CS pos: 28-29. VLA-SN. Pr: 0.7386
No Results

  • Fasta :-

    >PCHAS_0913100 MLRNIIKNYLLAIVLVLSVLKVDIAVLASNNNNTNNNQENFLNRTINALNSGRNIAKRYG HNQLKPVHILSALIKSEYGFNLFKSNNIDLENLKTFTDAALEQTRAGAPLDNKTIVINSD GANEVIAEAKAIAKKYKSPKVDIEHILHGLLTDELVSEIFGEIYLTEDSIKDILKAKFEK ATKNKEKKTTGLTIEQFGSNLNEKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGQ PGTGKTTIVEGLAYRIEKGDVPKELQGYTIISLNFRKFTAGTSYRGEFENRMKNIIKELK NKKNKIILFVDEIHLLLGAGKAEGGVDAANLLKPVLSKGEIKLIGATTVAEYRKFIESCS AFERRFEKIIVEPPSVETAIKILRSLKSKYEKFYGINITDKALVAAVKVSDKFIKDRFLP DKAIDLLNKACSFLQVQLSGKPRIIDLTERYIERLAYEISTLEMDVDKVSKKKYSSLVEE FELKKVELKKYYEEYVTSGERLKRKKEVEKKLNELKDLVQNYVNSGQEPPAELQKNLEEA QKQFVEIYKNTVAYVEEKTHNAMNVDALYQEHVSYIYLRDSGMPLGSLSFESSKGALKLY NSLSKSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTLAIELF NSKNNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVRERPHSVVLFDELEKAH PDVFKVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGAELFKKQFFFDADNSNTQEYKR LFEDLRIQLIKKCKKVFKPEFVNRIDKIGIFEPLSKKNLHQIVKLRFQKLEKRLEEKNIS IGVSDRAIDYIIDQSYDPELGARPTLIFIESVIMTKFAVMYLEKELVDDMDVYVDYNKSI NNIVINLSLS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0913100.fa Sequence name : PCHAS_0913100 Sequence length : 910 VALUES OF COMPUTED PARAMETERS Coef20 : 4.805 CoefTot : -1.491 ChDiff : 12 ZoneTo : 76 KR : 9 DE : 2 CleavSite : 63 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.176 2.612 0.222 0.733 MesoH : -0.525 0.354 -0.412 0.193 MuHd_075 : 48.854 27.570 11.496 10.983 MuHd_095 : 44.506 26.212 14.131 9.916 MuHd_100 : 41.927 27.049 12.572 9.211 MuHd_105 : 50.475 33.434 15.936 10.913 Hmax_075 : 8.050 28.800 0.209 3.488 Hmax_095 : 6.388 7.612 0.614 4.016 Hmax_100 : 15.000 13.600 2.632 5.370 Hmax_105 : 16.200 15.600 2.988 5.850 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1923 0.8077 DFMC : 0.2159 0.7841 This protein is probably imported in mitochondria. f(Ser) = 0.0658 f(Arg) = 0.0526 CMi = 0.45788 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 910 PCHAS_0913100 MLRNIIKNYLLAIVLVLSVLKVDIAVLASNNNNTNNNQENFLNRTINALNSGRNIAKRYGHNQLKPVHILSALIKSEYGF 80 NLFKSNNIDLENLKTFTDAALEQTRAGAPLDNKTIVINSDGANEVIAEAKAIAKKYKSPKVDIEHILHGLLTDELVSEIF 160 GEIYLTEDSIKDILKAKFEKATKNKEKKTTGLTIEQFGSNLNEKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGQ 240 PGTGKTTIVEGLAYRIEKGDVPKELQGYTIISLNFRKFTAGTSYRGEFENRMKNIIKELKNKKNKIILFVDEIHLLLGAG 320 KAEGGVDAANLLKPVLSKGEIKLIGATTVAEYRKFIESCSAFERRFEKIIVEPPSVETAIKILRSLKSKYEKFYGINITD 400 KALVAAVKVSDKFIKDRFLPDKAIDLLNKACSFLQVQLSGKPRIIDLTERYIERLAYEISTLEMDVDKVSKKKYSSLVEE 480 FELKKVELKKYYEEYVTSGERLKRKKEVEKKLNELKDLVQNYVNSGQEPPAELQKNLEEAQKQFVEIYKNTVAYVEEKTH 560 NAMNVDALYQEHVSYIYLRDSGMPLGSLSFESSKGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLF 640 LGPTGVGKTELAKTLAIELFNSKNNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVRERPHSVVLFDELEKAH 720 PDVFKVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGAELFKKQFFFDADNSNTQEYKRLFEDLRIQLIKKCKKVFKPE 800 FVNRIDKIGIFEPLSKKNLHQIVKLRFQKLEKRLEEKNISIGVSDRAIDYIIDQSYDPELGARPTLIFIESVIMTKFAVM 880 YLEKELVDDMDVYVDYNKSINNIVINLSLS 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 .............................. 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0913100 3 ----MLR|NI 0.083 . PCHAS_0913100 7 MLRNIIK|NY 0.062 . PCHAS_0913100 21 LVLSVLK|VD 0.058 . PCHAS_0913100 44 QENFLNR|TI 0.106 . PCHAS_0913100 53 NALNSGR|NI 0.082 . PCHAS_0913100 57 SGRNIAK|RY 0.076 . PCHAS_0913100 58 GRNIAKR|YG 0.385 . PCHAS_0913100 65 YGHNQLK|PV 0.077 . PCHAS_0913100 75 ILSALIK|SE 0.082 . PCHAS_0913100 84 YGFNLFK|SN 0.074 . PCHAS_0913100 94 IDLENLK|TF 0.057 . PCHAS_0913100 105 AALEQTR|AG 0.073 . PCHAS_0913100 113 GAPLDNK|TI 0.056 . PCHAS_0913100 130 EVIAEAK|AI 0.075 . PCHAS_0913100 134 EAKAIAK|KY 0.057 . PCHAS_0913100 135 AKAIAKK|YK 0.170 . PCHAS_0913100 137 AIAKKYK|SP 0.101 . PCHAS_0913100 140 KKYKSPK|VD 0.072 . PCHAS_0913100 171 LTEDSIK|DI 0.077 . PCHAS_0913100 175 SIKDILK|AK 0.062 . PCHAS_0913100 177 KDILKAK|FE 0.068 . PCHAS_0913100 180 LKAKFEK|AT 0.081 . PCHAS_0913100 183 KFEKATK|NK 0.065 . PCHAS_0913100 185 EKATKNK|EK 0.072 . PCHAS_0913100 187 ATKNKEK|KT 0.071 . PCHAS_0913100 188 TKNKEKK|TT 0.185 . PCHAS_0913100 204 GSNLNEK|VR 0.069 . PCHAS_0913100 206 NLNEKVR|NG 0.085 . PCHAS_0913100 209 EKVRNGK|LQ 0.151 . PCHAS_0913100 216 LQGIYGR|DE 0.095 . PCHAS_0913100 221 GRDEEIR|AI 0.124 . PCHAS_0913100 229 IIESLLR|YN 0.071 . PCHAS_0913100 232 SLLRYNK|NS 0.089 . PCHAS_0913100 245 GQPGTGK|TT 0.062 . PCHAS_0913100 255 VEGLAYR|IE 0.068 . PCHAS_0913100 258 LAYRIEK|GD 0.162 . PCHAS_0913100 263 EKGDVPK|EL 0.072 . PCHAS_0913100 276 IISLNFR|KF 0.109 . PCHAS_0913100 277 ISLNFRK|FT 0.080 . PCHAS_0913100 285 TAGTSYR|GE 0.103 . PCHAS_0913100 291 RGEFENR|MK 0.088 . PCHAS_0913100 293 EFENRMK|NI 0.071 . PCHAS_0913100 297 RMKNIIK|EL 0.063 . PCHAS_0913100 300 NIIKELK|NK 0.057 . PCHAS_0913100 302 IKELKNK|KN 0.068 . PCHAS_0913100 303 KELKNKK|NK 0.084 . PCHAS_0913100 305 LKNKKNK|II 0.075 . PCHAS_0913100 321 LLLGAGK|AE 0.067 . PCHAS_0913100 333 DAANLLK|PV 0.068 . PCHAS_0913100 338 LKPVLSK|GE 0.066 . PCHAS_0913100 342 LSKGEIK|LI 0.075 . PCHAS_0913100 353 TTVAEYR|KF 0.084 . PCHAS_0913100 354 TVAEYRK|FI 0.102 . PCHAS_0913100 364 SCSAFER|RF 0.124 . PCHAS_0913100 365 CSAFERR|FE 0.178 . PCHAS_0913100 368 FERRFEK|II 0.126 . PCHAS_0913100 381 SVETAIK|IL 0.058 . PCHAS_0913100 384 TAIKILR|SL 0.116 . PCHAS_0913100 387 KILRSLK|SK 0.189 . PCHAS_0913100 389 LRSLKSK|YE 0.079 . PCHAS_0913100 392 LKSKYEK|FY 0.107 . PCHAS_0913100 401 GINITDK|AL 0.074 . PCHAS_0913100 408 ALVAAVK|VS 0.063 . PCHAS_0913100 412 AVKVSDK|FI 0.065 . PCHAS_0913100 415 VSDKFIK|DR 0.066 . PCHAS_0913100 417 DKFIKDR|FL 0.114 . PCHAS_0913100 422 DRFLPDK|AI 0.071 . PCHAS_0913100 429 AIDLLNK|AC 0.064 . PCHAS_0913100 441 QVQLSGK|PR 0.061 . PCHAS_0913100 443 QLSGKPR|II 0.155 . PCHAS_0913100 450 IIDLTER|YI 0.088 . PCHAS_0913100 454 TERYIER|LA 0.095 . PCHAS_0913100 468 LEMDVDK|VS 0.063 . PCHAS_0913100 471 DVDKVSK|KK 0.061 . PCHAS_0913100 472 VDKVSKK|KY 0.109 . PCHAS_0913100 473 DKVSKKK|YS 0.159 . PCHAS_0913100 484 VEEFELK|KV 0.066 . PCHAS_0913100 485 EEFELKK|VE 0.065 . PCHAS_0913100 489 LKKVELK|KY 0.066 . PCHAS_0913100 490 KKVELKK|YY 0.160 . PCHAS_0913100 501 YVTSGER|LK 0.069 . PCHAS_0913100 503 TSGERLK|RK 0.066 . PCHAS_0913100 504 SGERLKR|KK 0.446 . PCHAS_0913100 505 GERLKRK|KE 0.081 . PCHAS_0913100 506 ERLKRKK|EV 0.251 . PCHAS_0913100 510 RKKEVEK|KL 0.067 . PCHAS_0913100 511 KKEVEKK|LN 0.091 . PCHAS_0913100 516 KKLNELK|DL 0.069 . PCHAS_0913100 535 PPAELQK|NL 0.082 . PCHAS_0913100 542 NLEEAQK|QF 0.062 . PCHAS_0913100 549 QFVEIYK|NT 0.062 . PCHAS_0913100 558 VAYVEEK|TH 0.061 . PCHAS_0913100 579 VSYIYLR|DS 0.146 . PCHAS_0913100 594 LSFESSK|GA 0.070 . PCHAS_0913100 598 SSKGALK|LY 0.056 . PCHAS_0913100 605 LYNSLSK|SI 0.100 . PCHAS_0913100 615 GNEDIIK|SL 0.095 . PCHAS_0913100 623 LSDAVVK|AA 0.070 . PCHAS_0913100 629 KAATGMK|DP 0.080 . PCHAS_0913100 633 GMKDPEK|PI 0.083 . PCHAS_0913100 648 GPTGVGK|TE 0.060 . PCHAS_0913100 653 GKTELAK|TL 0.067 . PCHAS_0913100 663 IELFNSK|NN 0.055 . PCHAS_0913100 668 SKNNLIR|VN 0.102 . PCHAS_0913100 682 EAHSVSK|IT 0.072 . PCHAS_0913100 704 QLTEAVR|ER 0.069 . PCHAS_0913100 706 TEAVRER|PH 0.141 . PCHAS_0913100 718 LFDELEK|AH 0.058 . PCHAS_0913100 725 AHPDVFK|VL 0.074 . PCHAS_0913100 741 YINDNHR|RN 0.083 . PCHAS_0913100 742 INDNHRR|NI 0.184 . PCHAS_0913100 763 LGAELFK|KQ 0.058 . PCHAS_0913100 764 GAELFKK|QF 0.090 . PCHAS_0913100 779 SNTQEYK|RL 0.068 . PCHAS_0913100 780 NTQEYKR|LF 0.186 . PCHAS_0913100 786 RLFEDLR|IQ 0.069 . PCHAS_0913100 791 LRIQLIK|KC 0.073 . PCHAS_0913100 792 RIQLIKK|CK 0.084 . PCHAS_0913100 794 QLIKKCK|KV 0.090 . PCHAS_0913100 795 LIKKCKK|VF 0.092 . PCHAS_0913100 798 KCKKVFK|PE 0.070 . PCHAS_0913100 804 KPEFVNR|ID 0.119 . PCHAS_0913100 807 FVNRIDK|IG 0.097 . PCHAS_0913100 816 IFEPLSK|KN 0.058 . PCHAS_0913100 817 FEPLSKK|NL 0.094 . PCHAS_0913100 824 NLHQIVK|LR 0.063 . PCHAS_0913100 826 HQIVKLR|FQ 0.095 . PCHAS_0913100 829 VKLRFQK|LE 0.088 . PCHAS_0913100 832 RFQKLEK|RL 0.064 . PCHAS_0913100 833 FQKLEKR|LE 0.134 . PCHAS_0913100 837 EKRLEEK|NI 0.076 . PCHAS_0913100 846 SIGVSDR|AI 0.155 . PCHAS_0913100 863 DPELGAR|PT 0.086 . PCHAS_0913100 876 ESVIMTK|FA 0.068 . PCHAS_0913100 884 AVMYLEK|EL 0.060 . PCHAS_0913100 898 VYVDYNK|SI 0.072 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0913100 ATGTTACGGAATATTATTAAAAATTACTTGCTTGCCATCGTTTTGGTACTATCTGTACTC AAGGTCGATATAGCAGTGTTAGCCTCCAACAATAACAATACCAACAACAATCAGGAAAAC TTTTTGAACCGAACTATCAATGCTTTAAATTCGGGACGAAACATTGCAAAACGATATGGC CACAACCAATTAAAACCTGTGCACATTTTGAGTGCTTTAATAAAGAGCGAATATGGATTC AATTTATTTAAGTCGAATAATATTGACTTGGAGAACTTGAAGACATTTACCGATGCTGCC TTAGAACAAACTAGAGCCGGAGCGCCCCTTGACAACAAAACAATTGTTATAAACTCTGAT GGAGCAAATGAAGTTATAGCAGAAGCTAAAGCTATTGCAAAAAAATATAAAAGTCCAAAA GTTGACATAGAACATATATTACATGGTTTATTGACTGATGAACTTGTAAGTGAGATATTT GGTGAAATATATTTGACCGAAGATTCGATTAAAGATATTTTAAAAGCTAAATTTGAAAAG GCAACAAAAAATAAAGAAAAGAAAACAACTGGATTAACCATTGAACAATTTGGTTCTAAT TTAAATGAGAAAGTTAGAAATGGTAAATTACAAGGAATATATGGAAGAGATGAAGAAATT CGAGCAATTATTGAATCATTGTTACGATATAATAAGAACAGTCCTGTATTAGTTGGACAA CCTGGTACTGGTAAAACTACTATTGTTGAAGGTCTTGCTTACAGAATTGAAAAAGGTGAT GTTCCTAAAGAGTTACAAGGATATACAATTATAAGTTTAAATTTTCGTAAATTTACAGCC GGAACATCATATAGAGGAGAATTTGAAAATAGAATGAAAAATATAATTAAAGAATTAAAA AATAAAAAGAATAAAATCATATTATTTGTTGATGAAATTCACTTATTATTAGGTGCTGGT AAAGCTGAAGGTGGTGTAGATGCAGCCAATTTATTAAAACCTGTTTTATCAAAAGGTGAA ATCAAATTAATTGGTGCAACCACTGTTGCTGAATATAGAAAATTTATTGAAAGCTGTTCA GCTTTTGAAAGACGTTTTGAAAAAATTATTGTTGAACCCCCATCTGTTGAAACAGCAATC AAAATTTTAAGATCATTGAAAAGTAAATATGAAAAGTTTTATGGTATTAACATTACTGAT AAAGCTTTAGTTGCTGCTGTAAAGGTTTCTGATAAATTTATAAAAGATAGATTTTTACCC GATAAAGCTATTGATTTATTAAATAAAGCATGTTCCTTTTTACAAGTCCAATTATCTGGA AAACCAAGAATTATAGATTTAACAGAAAGATATATAGAAAGATTAGCATATGAAATAAGT ACATTAGAAATGGATGTTGATAAAGTTTCCAAAAAAAAATATAGTTCTTTAGTTGAAGAG TTTGAATTAAAAAAAGTCGAGTTAAAGAAATATTATGAAGAATATGTTACATCAGGAGAA AGATTAAAAAGAAAAAAAGAAGTTGAAAAAAAATTAAATGAATTAAAAGATTTAGTACAA AATTATGTTAATTCAGGTCAAGAACCTCCTGCTGAATTACAAAAAAATTTAGAAGAAGCT CAAAAACAATTCGTAGAAATATATAAAAATACTGTAGCATATGTTGAAGAAAAAACTCAT AATGCTATGAATGTAGATGCACTTTATCAAGAACATGTATCATATATTTATTTAAGAGAT TCTGGTATGCCTTTAGGTTCATTATCATTTGAATCATCAAAAGGTGCATTAAAATTATAT AACAGTTTATCAAAATCAATTATTGGTAATGAAGACATTATTAAATCTTTAAGTGATGCT GTTGTTAAAGCTGCAACTGGTATGAAAGATCCCGAAAAACCTATTGGTACTTTTCTATTT TTGGGTCCTACTGGTGTTGGTAAAACAGAGTTAGCTAAAACATTAGCTATTGAATTATTT AATTCAAAAAATAACTTAATTCGTGTTAATATGTCAGAATTTACTGAAGCACATTCAGTA TCTAAAATCACTGGTAGTCCACCAGGTTATGTTGGATTTAGTGACTCTGGTCAGTTAACA GAAGCTGTAAGAGAAAGACCCCACTCTGTTGTTTTATTTGATGAATTAGAAAAAGCACAT CCAGATGTATTTAAAGTTTTATTACAAATTTTAGGTGATGGTTATATTAATGATAATCAT AGAAGAAATATCGATTTTTCAAATACTATTATTATTATGACATCTAACTTAGGTGCTGAA TTATTTAAAAAACAATTTTTCTTTGATGCTGATAATTCAAATACACAAGAATATAAAAGA TTATTTGAAGATCTTAGAATTCAATTAATTAAAAAATGTAAAAAAGTTTTCAAACCTGAA TTTGTTAACAGAATTGATAAAATCGGTATTTTCGAACCATTAAGCAAAAAAAATCTACAT CAAATTGTTAAATTACGATTCCAAAAATTAGAAAAACGTTTAGAAGAAAAAAATATTAGC ATTGGCGTGTCAGATAGAGCTATAGACTATATTATTGATCAATCATATGATCCAGAATTA GGAGCTAGACCCACACTTATCTTTATTGAAAGTGTTATTATGACTAAATTTGCTGTTATG TATTTAGAAAAAGAATTAGTTGATGATATGGATGTATATGTTGACTACAACAAATCAATT AATAATATTGTTATTAACCTTTCATTGTCATAA
  • Download Fasta

  • Fasta :-

    MLRNIIKNYLLAIVLVLSVLKVDIAVLASNNNNTNNNQENFLNRTINALNSGRNIAKRYG HNQLKPVHILSALIKSEYGFNLFKSNNIDLENLKTFTDAALEQTRAGAPLDNKTIVINSD GANEVIAEAKAIAKKYKSPKVDIEHILHGLLTDELVSEIFGEIYLTEDSIKDILKAKFEK ATKNKEKKTTGLTIEQFGSNLNEKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGQ PGTGKTTIVEGLAYRIEKGDVPKELQGYTIISLNFRKFTAGTSYRGEFENRMKNIIKELK NKKNKIILFVDEIHLLLGAGKAEGGVDAANLLKPVLSKGEIKLIGATTVAEYRKFIESCS AFERRFEKIIVEPPSVETAIKILRSLKSKYEKFYGINITDKALVAAVKVSDKFIKDRFLP DKAIDLLNKACSFLQVQLSGKPRIIDLTERYIERLAYEISTLEMDVDKVSKKKYSSLVEE FELKKVELKKYYEEYVTSGERLKRKKEVEKKLNELKDLVQNYVNSGQEPPAELQKNLEEA QKQFVEIYKNTVAYVEEKTHNAMNVDALYQEHVSYIYLRDSGMPLGSLSFESSKGALKLY NSLSKSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTLAIELF NSKNNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVRERPHSVVLFDELEKAH PDVFKVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGAELFKKQFFFDADNSNTQEYKR LFEDLRIQLIKKCKKVFKPEFVNRIDKIGIFEPLSKKNLHQIVKLRFQKLEKRLEEKNIS IGVSDRAIDYIIDQSYDPELGARPTLIFIESVIMTKFAVMYLEKELVDDMDVYVDYNKSI NNIVINLSLS

  • title: ATP binding site
  • coordinates: Q240,P241,G242,T243,G244,K245,T246,T247,D311,T348
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0913100476 SKKYSSLVEE0.995unspPCHAS_0913100476 SKKYSSLVEE0.995unspPCHAS_0913100476 SKKYSSLVEE0.995unspPCHAS_0913100709 SERPHSVVLF0.994unspPCHAS_0913100138 SKKYKSPKVD0.997unspPCHAS_0913100169 SLTEDSIKDI0.994unsp

PCHAS_091310      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India