PCHAS_0913400 | ubiquitin carboxyl-terminal hydrolase UCH54, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0913400OTHER0.9999900.0000070.000003
No Results

  • Fasta :-

    >PCHAS_0913400 MQSENDSIGEWCLIESNPCIFYEMLKQMGAKDISAEDVYDLEYFDNYINNKDEITIENIL SIQEYRNEKEKEAGLEAEMGTEPYINNTDLEDKYNKLLNNFSHVYGIIFLFNIGKTYDRK RYKEHNVPENLFFARQVIPNACATQAILSIIFNKNIQLNENIENIKTFSINFDSTMKGLT LSNCNFLRNIHNSFKTPIYIENDDLYHDKKKESNSFHFVSYIEFEKSVYLLDGLQEGPIL ITDENSDEQTGLANDWITIARNHIKKDINIMSTSNEDTENRFNILTIVKDKQSIIEEYIN IHRILKQRANIKLVSLGEDIELHDEINEDDYSFSNKIPSIDQLPSDIEKLHNISNKSSIE INYLEKLLTKEIELKASWDKERTFKFFNFYPFIISSINLMAKHKILKPSYEKEKQKRST
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0913400.fa Sequence name : PCHAS_0913400 Sequence length : 419 VALUES OF COMPUTED PARAMETERS Coef20 : 3.364 CoefTot : -0.043 ChDiff : -21 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.994 1.359 0.117 0.589 MesoH : -0.860 0.069 -0.516 0.126 MuHd_075 : 22.191 14.284 7.804 3.690 MuHd_095 : 14.360 9.664 5.186 1.993 MuHd_100 : 11.252 7.133 3.535 2.496 MuHd_105 : 7.779 4.700 1.852 2.810 Hmax_075 : 4.100 8.517 0.723 4.387 Hmax_095 : 2.888 3.938 -0.349 1.934 Hmax_100 : 1.200 0.700 -0.848 2.070 Hmax_105 : 3.700 4.100 -1.809 3.450 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9866 0.0134 DFMC : 0.9823 0.0177
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 419 PCHAS_0913400 MQSENDSIGEWCLIESNPCIFYEMLKQMGAKDISAEDVYDLEYFDNYINNKDEITIENILSIQEYRNEKEKEAGLEAEMG 80 TEPYINNTDLEDKYNKLLNNFSHVYGIIFLFNIGKTYDRKRYKEHNVPENLFFARQVIPNACATQAILSIIFNKNIQLNE 160 NIENIKTFSINFDSTMKGLTLSNCNFLRNIHNSFKTPIYIENDDLYHDKKKESNSFHFVSYIEFEKSVYLLDGLQEGPIL 240 ITDENSDEQTGLANDWITIARNHIKKDINIMSTSNEDTENRFNILTIVKDKQSIIEEYINIHRILKQRANIKLVSLGEDI 320 ELHDEINEDDYSFSNKIPSIDQLPSDIEKLHNISNKSSIEINYLEKLLTKEIELKASWDKERTFKFFNFYPFIISSINLM 400 AKHKILKPSYEKEKQKRST 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0913400 26 IFYEMLK|QM 0.066 . PCHAS_0913400 31 LKQMGAK|DI 0.103 . PCHAS_0913400 51 DNYINNK|DE 0.075 . PCHAS_0913400 66 LSIQEYR|NE 0.096 . PCHAS_0913400 69 QEYRNEK|EK 0.155 . PCHAS_0913400 71 YRNEKEK|EA 0.096 . PCHAS_0913400 93 NTDLEDK|YN 0.056 . PCHAS_0913400 96 LEDKYNK|LL 0.057 . PCHAS_0913400 115 FLFNIGK|TY 0.064 . PCHAS_0913400 119 IGKTYDR|KR 0.072 . PCHAS_0913400 120 GKTYDRK|RY 0.069 . PCHAS_0913400 121 KTYDRKR|YK 0.258 . PCHAS_0913400 123 YDRKRYK|EH 0.067 . PCHAS_0913400 135 ENLFFAR|QV 0.143 . PCHAS_0913400 154 LSIIFNK|NI 0.072 . PCHAS_0913400 166 ENIENIK|TF 0.066 . PCHAS_0913400 177 NFDSTMK|GL 0.059 . PCHAS_0913400 188 SNCNFLR|NI 0.159 . PCHAS_0913400 195 NIHNSFK|TP 0.068 . PCHAS_0913400 209 DDLYHDK|KK 0.065 . PCHAS_0913400 210 DLYHDKK|KE 0.110 . PCHAS_0913400 211 LYHDKKK|ES 0.101 . PCHAS_0913400 226 SYIEFEK|SV 0.079 . PCHAS_0913400 261 DWITIAR|NH 0.082 . PCHAS_0913400 265 IARNHIK|KD 0.079 . PCHAS_0913400 266 ARNHIKK|DI 0.185 . PCHAS_0913400 281 NEDTENR|FN 0.073 . PCHAS_0913400 289 NILTIVK|DK 0.062 . PCHAS_0913400 291 LTIVKDK|QS 0.071 . PCHAS_0913400 303 EYINIHR|IL 0.070 . PCHAS_0913400 306 NIHRILK|QR 0.093 . PCHAS_0913400 308 HRILKQR|AN 0.118 . PCHAS_0913400 312 KQRANIK|LV 0.101 . PCHAS_0913400 336 DYSFSNK|IP 0.069 . PCHAS_0913400 349 LPSDIEK|LH 0.067 . PCHAS_0913400 356 LHNISNK|SS 0.104 . PCHAS_0913400 366 EINYLEK|LL 0.064 . PCHAS_0913400 370 LEKLLTK|EI 0.063 . PCHAS_0913400 375 TKEIELK|AS 0.086 . PCHAS_0913400 380 LKASWDK|ER 0.064 . PCHAS_0913400 382 ASWDKER|TF 0.084 . PCHAS_0913400 385 DKERTFK|FF 0.150 . PCHAS_0913400 402 SINLMAK|HK 0.069 . PCHAS_0913400 404 NLMAKHK|IL 0.071 . PCHAS_0913400 407 AKHKILK|PS 0.075 . PCHAS_0913400 412 LKPSYEK|EK 0.053 . PCHAS_0913400 414 PSYEKEK|QK 0.066 . PCHAS_0913400 416 YEKEKQK|RS 0.065 . PCHAS_0913400 417 EKEKQKR|ST 0.426 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0913400 ATGCAAAGTGAAAATGATAGCATCGGGGAGTGGTGCTTGATCGAAAGTAACCCCTGCATA TTTTATGAAATGCTGAAGCAGATGGGCGCAAAAGATATATCAGCAGAGGATGTGTATGAT TTAGAATATTTTGATAATTATATAAATAACAAAGATGAAATAACAATTGAAAATATATTA AGTATACAAGAGTACAGAAATGAAAAAGAAAAAGAAGCAGGTTTGGAAGCAGAAATGGGG ACAGAACCATATATAAATAATACAGATCTAGAAGATAAATATAATAAACTTTTAAATAAT TTTTCTCATGTATATGGAATAATATTTTTATTTAACATTGGCAAAACATATGATCGAAAA AGATATAAAGAACATAATGTACCTGAAAATTTATTTTTTGCTAGACAGGTTATTCCGAAT GCATGTGCAACACAAGCTATATTATCCATCATATTTAACAAAAATATACAATTAAATGAA AATATAGAAAATATAAAAACATTTAGTATAAATTTTGATAGTACTATGAAAGGATTAACA TTATCTAATTGTAACTTTTTACGAAATATTCATAATTCTTTTAAAACTCCAATATATATA GAAAATGATGATTTATATCATGACAAAAAAAAAGAATCGAATTCATTCCATTTTGTATCT TATATTGAATTTGAAAAAAGTGTATATCTATTAGATGGTTTGCAAGAAGGCCCAATTTTA ATTACGGATGAAAATTCTGATGAACAGACAGGACTAGCCAATGATTGGATAACCATAGCA AGGAACCATATAAAAAAAGACATAAATATTATGAGTACCTCTAACGAAGATACAGAAAAC AGATTTAATATTTTAACAATAGTAAAGGATAAACAGTCTATAATAGAGGAATATATAAAT ATACATAGAATCCTAAAACAAAGAGCAAATATTAAACTAGTAAGTTTAGGAGAAGATATA GAATTACATGATGAAATCAATGAAGATGATTATTCTTTTTCAAATAAAATTCCTAGTATT GATCAACTTCCATCGGATATTGAGAAATTACATAACATTTCAAACAAATCATCAATCGAA ATTAATTATTTAGAAAAACTACTGACCAAAGAAATAGAACTTAAAGCTTCTTGGGATAAA GAACGAACTTTCAAATTTTTTAATTTCTATCCCTTCATAATATCTTCAATAAATTTAATG GCAAAACATAAAATTTTAAAGCCATCCTACGAAAAAGAAAAACAAAAACGAAGCACATGA
  • Download Fasta

  • Fasta :-

    MQSENDSIGEWCLIESNPCIFYEMLKQMGAKDISAEDVYDLEYFDNYINNKDEITIENIL SIQEYRNEKEKEAGLEAEMGTEPYINNTDLEDKYNKLLNNFSHVYGIIFLFNIGKTYDRK RYKEHNVPENLFFARQVIPNACATQAILSIIFNKNIQLNENIENIKTFSINFDSTMKGLT LSNCNFLRNIHNSFKTPIYIENDDLYHDKKKESNSFHFVSYIEFEKSVYLLDGLQEGPIL ITDENSDEQTGLANDWITIARNHIKKDINIMSTSNEDTENRFNILTIVKDKQSIIEEYIN IHRILKQRANIKLVSLGEDIELHDEINEDDYSFSNKIPSIDQLPSDIEKLHNISNKSSIE INYLEKLLTKEIELKASWDKERTFKFFNFYPFIISSINLMAKHKILKPSYEKEKQKRST

  • title: catalytic site
  • coordinates: Q136,C142,H217,D232
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0913400409 SILKPSYEKE0.991unspPCHAS_0913400409 SILKPSYEKE0.991unspPCHAS_0913400409 SILKPSYEKE0.991unspPCHAS_091340034 SAKDISAEDV0.992unspPCHAS_0913400274 SIMSTSNEDT0.995unsp

PCHAS_091340      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India