PCHAS_0915800 | ATP-dependent zinc metalloprotease FTSH, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0915800OTHER0.9784830.0000730.021444
No Results

  • Fasta :-

    >PCHAS_0915800 MYRSHMLEKNGRLLLKERKYLKNILESYRFEGVREKKNDLFTINNDGKRCINSLVYTPNF NKISQNKKDGIVITCDKKKYEQDIFSLNYFIDFIQTKFNNKNLKNNSKFVKNVSNLFNKY AKLCYTSNVDYMQQNNEDTKHLKISEEKINNFLKKSFKSYNKINKISSNIINSDAHHPNG LVDNKTEIDGKKKEPNFVETLFNDIVKIYLSKIPKGFERFEKSDSNKNCNGNINNAQQEE EKPKKFDNNFFYLFILLLLCFLLFVDSNSLYNEITQNDFFYNYLSKGYVDKIKLINKDYV KAYLNSHGINKYHLKYVSFRVGNSDSFERKVELIQKEMNIKLDEIIEVQYVNEGNLVGEI KSYIPSILFFLFLVFIFQKITLKNVANSGMDKLFKFNKINPINKNNYKTDIKFSSVAGMK QAKEEIMEFVDFLKNPAKYQVLGAKIPKGALLCGAPGTGKTLLAKAVAGEANVPFFNISG SDFIEVFVGIGPSRVRELFAQARKHAPSIIFIDEIDAVGRKRSKGGFAGGGNDERENTLN QMLVEMDGFHTSNDQVVVLAGTNRVDILDPAITRPGRFDRIVNINKPDINERSEIFQVHL KNLKLHDSLDIKNISYILASLTPGFVGADIANVVNEGAIQCARRSHIQGVQMHDFELAIE RVLGGLAKSTSLISPLEKKTISYHETGHALIGWFLEFADPVLKVSIIPRSNGALGYSQHL SEEIMLFSKEAIHDKIAVILGGRAAEELFIGKITTGAIDDLNKVTQLAYSYVSQYGMNKE IGLVSFQQNGGNNGGSEYSFYRPHSECLAHLIDNEARNLIESQYNRVKAILKKNEKHVHN LANLLYEKETISYHDIVKCVGERPYPIKSNYEKFVKANPYKMNLSASIEEKTGEKAEEAD SEHAQKNESHKDATNNEHDKNSNNLKKKNSKNDSGDVNGVSHATPNNNDRNKKDEQISNF NIR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0915800.fa Sequence name : PCHAS_0915800 Sequence length : 963 VALUES OF COMPUTED PARAMETERS Coef20 : 3.833 CoefTot : -0.027 ChDiff : 18 ZoneTo : 7 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.371 2.765 0.448 0.939 MesoH : -0.326 0.523 -0.296 0.294 MuHd_075 : 40.897 13.076 6.922 7.118 MuHd_095 : 9.496 9.706 5.944 1.998 MuHd_100 : 10.079 9.749 5.681 1.973 MuHd_105 : 16.647 11.049 5.900 3.763 Hmax_075 : 5.367 5.483 -3.102 2.683 Hmax_095 : -13.912 1.200 -3.588 -0.280 Hmax_100 : -9.900 2.200 -3.281 0.360 Hmax_105 : -6.212 3.587 -2.752 0.875 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9747 0.0253 DFMC : 0.9699 0.0301
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 963 PCHAS_0915800 MYRSHMLEKNGRLLLKERKYLKNILESYRFEGVREKKNDLFTINNDGKRCINSLVYTPNFNKISQNKKDGIVITCDKKKY 80 EQDIFSLNYFIDFIQTKFNNKNLKNNSKFVKNVSNLFNKYAKLCYTSNVDYMQQNNEDTKHLKISEEKINNFLKKSFKSY 160 NKINKISSNIINSDAHHPNGLVDNKTEIDGKKKEPNFVETLFNDIVKIYLSKIPKGFERFEKSDSNKNCNGNINNAQQEE 240 EKPKKFDNNFFYLFILLLLCFLLFVDSNSLYNEITQNDFFYNYLSKGYVDKIKLINKDYVKAYLNSHGINKYHLKYVSFR 320 VGNSDSFERKVELIQKEMNIKLDEIIEVQYVNEGNLVGEIKSYIPSILFFLFLVFIFQKITLKNVANSGMDKLFKFNKIN 400 PINKNNYKTDIKFSSVAGMKQAKEEIMEFVDFLKNPAKYQVLGAKIPKGALLCGAPGTGKTLLAKAVAGEANVPFFNISG 480 SDFIEVFVGIGPSRVRELFAQARKHAPSIIFIDEIDAVGRKRSKGGFAGGGNDERENTLNQMLVEMDGFHTSNDQVVVLA 560 GTNRVDILDPAITRPGRFDRIVNINKPDINERSEIFQVHLKNLKLHDSLDIKNISYILASLTPGFVGADIANVVNEGAIQ 640 CARRSHIQGVQMHDFELAIERVLGGLAKSTSLISPLEKKTISYHETGHALIGWFLEFADPVLKVSIIPRSNGALGYSQHL 720 SEEIMLFSKEAIHDKIAVILGGRAAEELFIGKITTGAIDDLNKVTQLAYSYVSQYGMNKEIGLVSFQQNGGNNGGSEYSF 800 YRPHSECLAHLIDNEARNLIESQYNRVKAILKKNEKHVHNLANLLYEKETISYHDIVKCVGERPYPIKSNYEKFVKANPY 880 KMNLSASIEEKTGEKAEEADSEHAQKNESHKDATNNEHDKNSNNLKKKNSKNDSGDVNGVSHATPNNNDRNKKDEQISNF 960 NIR 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...................P............................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ... 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0915800 3 ----MYR|SH 0.110 . PCHAS_0915800 9 RSHMLEK|NG 0.062 . PCHAS_0915800 12 MLEKNGR|LL 0.089 . PCHAS_0915800 16 NGRLLLK|ER 0.056 . PCHAS_0915800 18 RLLLKER|KY 0.077 . PCHAS_0915800 19 LLLKERK|YL 0.090 . PCHAS_0915800 22 KERKYLK|NI 0.061 . PCHAS_0915800 29 NILESYR|FE 0.092 . PCHAS_0915800 34 YRFEGVR|EK 0.088 . PCHAS_0915800 36 FEGVREK|KN 0.056 . PCHAS_0915800 37 EGVREKK|ND 0.155 . PCHAS_0915800 48 TINNDGK|RC 0.068 . PCHAS_0915800 49 INNDGKR|CI 0.184 . PCHAS_0915800 62 YTPNFNK|IS 0.058 . PCHAS_0915800 67 NKISQNK|KD 0.077 . PCHAS_0915800 68 KISQNKK|DG 0.150 . PCHAS_0915800 77 IVITCDK|KK 0.056 . PCHAS_0915800 78 VITCDKK|KY 0.085 . PCHAS_0915800 79 ITCDKKK|YE 0.122 . PCHAS_0915800 97 IDFIQTK|FN 0.076 . PCHAS_0915800 101 QTKFNNK|NL 0.056 . PCHAS_0915800 104 FNNKNLK|NN 0.077 . PCHAS_0915800 108 NLKNNSK|FV 0.081 . PCHAS_0915800 111 NNSKFVK|NV 0.110 . PCHAS_0915800 119 VSNLFNK|YA 0.073 . PCHAS_0915800 122 LFNKYAK|LC 0.069 . PCHAS_0915800 140 QNNEDTK|HL 0.074 . PCHAS_0915800 143 EDTKHLK|IS 0.075 . PCHAS_0915800 148 LKISEEK|IN 0.060 . PCHAS_0915800 154 KINNFLK|KS 0.070 . PCHAS_0915800 155 INNFLKK|SF 0.215 . PCHAS_0915800 158 FLKKSFK|SY 0.095 . PCHAS_0915800 162 SFKSYNK|IN 0.056 . PCHAS_0915800 165 SYNKINK|IS 0.079 . PCHAS_0915800 185 NGLVDNK|TE 0.059 . PCHAS_0915800 191 KTEIDGK|KK 0.064 . PCHAS_0915800 192 TEIDGKK|KE 0.085 . PCHAS_0915800 193 EIDGKKK|EP 0.092 . PCHAS_0915800 207 LFNDIVK|IY 0.063 . PCHAS_0915800 212 VKIYLSK|IP 0.061 . PCHAS_0915800 215 YLSKIPK|GF 0.085 . PCHAS_0915800 219 IPKGFER|FE 0.081 . PCHAS_0915800 222 GFERFEK|SD 0.234 . PCHAS_0915800 227 EKSDSNK|NC 0.077 . PCHAS_0915800 242 AQQEEEK|PK 0.058 . PCHAS_0915800 244 QEEEKPK|KF 0.074 . PCHAS_0915800 245 EEEKPKK|FD 0.097 . PCHAS_0915800 286 FYNYLSK|GY 0.069 . PCHAS_0915800 291 SKGYVDK|IK 0.065 . PCHAS_0915800 293 GYVDKIK|LI 0.065 . PCHAS_0915800 297 KIKLINK|DY 0.066 . PCHAS_0915800 301 INKDYVK|AY 0.057 . PCHAS_0915800 311 NSHGINK|YH 0.064 . PCHAS_0915800 315 INKYHLK|YV 0.100 . PCHAS_0915800 320 LKYVSFR|VG 0.077 . PCHAS_0915800 329 NSDSFER|KV 0.129 . PCHAS_0915800 330 SDSFERK|VE 0.087 . PCHAS_0915800 336 KVELIQK|EM 0.062 . PCHAS_0915800 341 QKEMNIK|LD 0.073 . PCHAS_0915800 361 NLVGEIK|SY 0.087 . PCHAS_0915800 379 LVFIFQK|IT 0.060 . PCHAS_0915800 383 FQKITLK|NV 0.070 . PCHAS_0915800 392 ANSGMDK|LF 0.059 . PCHAS_0915800 395 GMDKLFK|FN 0.064 . PCHAS_0915800 398 KLFKFNK|IN 0.063 . PCHAS_0915800 404 KINPINK|NN 0.061 . PCHAS_0915800 408 INKNNYK|TD 0.060 . PCHAS_0915800 412 NYKTDIK|FS 0.072 . PCHAS_0915800 420 SSVAGMK|QA 0.076 . PCHAS_0915800 423 AGMKQAK|EE 0.070 . PCHAS_0915800 434 EFVDFLK|NP 0.056 . PCHAS_0915800 438 FLKNPAK|YQ 0.065 . PCHAS_0915800 445 YQVLGAK|IP 0.063 . PCHAS_0915800 448 LGAKIPK|GA 0.069 . PCHAS_0915800 460 GAPGTGK|TL 0.057 . PCHAS_0915800 465 GKTLLAK|AV 0.078 . PCHAS_0915800 494 VGIGPSR|VR 0.069 . PCHAS_0915800 496 IGPSRVR|EL 0.085 . PCHAS_0915800 503 ELFAQAR|KH 0.087 . PCHAS_0915800 504 LFAQARK|HA 0.087 . PCHAS_0915800 520 EIDAVGR|KR 0.101 . PCHAS_0915800 521 IDAVGRK|RS 0.083 . PCHAS_0915800 522 DAVGRKR|SK 0.322 . PCHAS_0915800 524 VGRKRSK|GG 0.075 . PCHAS_0915800 535 GGGNDER|EN 0.077 . PCHAS_0915800 564 VLAGTNR|VD 0.069 . PCHAS_0915800 574 LDPAITR|PG 0.065 . PCHAS_0915800 577 AITRPGR|FD 0.216 . PCHAS_0915800 580 RPGRFDR|IV 0.547 *ProP* PCHAS_0915800 586 RIVNINK|PD 0.060 . PCHAS_0915800 592 KPDINER|SE 0.117 . PCHAS_0915800 601 IFQVHLK|NL 0.057 . PCHAS_0915800 604 VHLKNLK|LH 0.052 . PCHAS_0915800 612 HDSLDIK|NI 0.082 . PCHAS_0915800 643 GAIQCAR|RS 0.106 . PCHAS_0915800 644 AIQCARR|SH 0.329 . PCHAS_0915800 661 FELAIER|VL 0.082 . PCHAS_0915800 668 VLGGLAK|ST 0.088 . PCHAS_0915800 678 LISPLEK|KT 0.069 . PCHAS_0915800 679 ISPLEKK|TI 0.133 . PCHAS_0915800 703 FADPVLK|VS 0.052 . PCHAS_0915800 709 KVSIIPR|SN 0.252 . PCHAS_0915800 729 EIMLFSK|EA 0.063 . PCHAS_0915800 735 KEAIHDK|IA 0.071 . PCHAS_0915800 743 AVILGGR|AA 0.086 . PCHAS_0915800 752 EELFIGK|IT 0.064 . PCHAS_0915800 763 AIDDLNK|VT 0.056 . PCHAS_0915800 779 SQYGMNK|EI 0.071 . PCHAS_0915800 802 SEYSFYR|PH 0.115 . PCHAS_0915800 817 LIDNEAR|NL 0.100 . PCHAS_0915800 826 IESQYNR|VK 0.080 . PCHAS_0915800 828 SQYNRVK|AI 0.068 . PCHAS_0915800 832 RVKAILK|KN 0.066 . PCHAS_0915800 833 VKAILKK|NE 0.091 . PCHAS_0915800 836 ILKKNEK|HV 0.073 . PCHAS_0915800 848 ANLLYEK|ET 0.056 . PCHAS_0915800 858 SYHDIVK|CV 0.079 . PCHAS_0915800 863 VKCVGER|PY 0.072 . PCHAS_0915800 868 ERPYPIK|SN 0.091 . PCHAS_0915800 873 IKSNYEK|FV 0.110 . PCHAS_0915800 876 NYEKFVK|AN 0.061 . PCHAS_0915800 881 VKANPYK|MN 0.065 . PCHAS_0915800 891 SASIEEK|TG 0.088 . PCHAS_0915800 895 EEKTGEK|AE 0.057 . PCHAS_0915800 906 DSEHAQK|NE 0.072 . PCHAS_0915800 911 QKNESHK|DA 0.128 . PCHAS_0915800 920 TNNEHDK|NS 0.065 . PCHAS_0915800 926 KNSNNLK|KK 0.073 . PCHAS_0915800 927 NSNNLKK|KN 0.136 . PCHAS_0915800 928 SNNLKKK|NS 0.109 . PCHAS_0915800 931 LKKKNSK|ND 0.070 . PCHAS_0915800 950 TPNNNDR|NK 0.135 . PCHAS_0915800 952 NNNDRNK|KD 0.074 . PCHAS_0915800 953 NNDRNKK|DE 0.329 . PCHAS_0915800 963 ISNFNIR|-- 0.126 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0915800 ATGTATAGATCTCATATGCTTGAAAAGAATGGACGACTCCTATTGAAGGAAAGAAAATAT CTTAAAAATATATTAGAAAGTTACAGATTTGAAGGGGTTAGAGAGAAAAAAAATGATTTG TTTACTATTAATAATGATGGGAAAAGATGTATAAACTCATTAGTATATACACCTAATTTT AATAAAATAAGCCAAAATAAAAAGGATGGAATAGTTATAACATGTGATAAAAAAAAATAT GAACAAGACATATTTTCTTTGAATTATTTTATAGATTTCATTCAAACCAAATTTAATAAT AAAAATTTAAAAAATAATAGTAAATTTGTGAAAAATGTTTCTAATCTATTTAATAAATAT GCAAAATTATGTTACACAAGCAATGTAGATTATATGCAACAAAATAATGAAGACACAAAA CATTTAAAAATAAGCGAAGAAAAAATAAATAATTTTTTAAAGAAGTCTTTTAAATCATAT AACAAAATAAATAAAATTTCTAGTAATATTATAAACAGTGATGCACATCATCCAAATGGT CTTGTAGATAATAAAACAGAGATTGATGGAAAAAAGAAAGAACCAAATTTTGTAGAAACA TTATTTAATGATATTGTAAAAATATATTTATCTAAAATTCCTAAAGGATTTGAAAGATTT GAAAAAAGCGATTCAAACAAAAATTGTAATGGGAATATAAATAATGCTCAACAAGAAGAA GAAAAACCCAAAAAATTTGATAATAACTTTTTTTATTTATTTATTTTATTATTATTATGT TTTCTACTATTTGTCGATTCAAATAGTTTATATAATGAAATAACACAAAATGATTTTTTT TACAATTATTTATCTAAAGGATATGTAGATAAAATCAAATTAATAAATAAAGATTATGTA AAAGCATATTTAAATTCACATGGTATTAATAAATATCATTTAAAATATGTTAGTTTTAGA GTAGGAAATAGTGATTCCTTTGAAAGAAAAGTTGAACTAATACAAAAAGAAATGAATATA AAACTTGATGAAATTATAGAAGTACAATATGTAAATGAAGGAAATCTTGTAGGGGAAATC AAATCTTATATTCCTAGTATACTTTTTTTTCTGTTTTTAGTTTTCATATTCCAAAAAATA ACTTTAAAAAATGTAGCAAACAGTGGAATGGATAAGCTATTTAAATTTAATAAAATAAAT CCGATTAATAAAAATAATTATAAAACAGATATAAAATTTTCAAGTGTTGCTGGAATGAAA CAAGCAAAAGAAGAAATTATGGAGTTTGTTGATTTTTTGAAAAATCCAGCAAAATATCAA GTATTAGGTGCAAAAATACCAAAAGGTGCATTATTATGTGGTGCACCGGGAACCGGAAAA ACTTTATTAGCAAAAGCTGTTGCTGGTGAAGCTAATGTTCCTTTTTTTAATATCAGTGGA AGTGATTTTATTGAAGTATTTGTGGGAATCGGACCATCAAGAGTTAGAGAACTATTTGCA CAAGCAAGAAAACATGCACCATCTATTATTTTTATAGATGAAATTGATGCTGTTGGACGA AAAAGATCAAAAGGAGGTTTTGCAGGTGGAGGAAATGATGAAAGAGAAAATACTTTAAAT CAGATGCTTGTTGAAATGGATGGGTTCCATACATCTAATGATCAAGTAGTTGTTTTAGCA GGAACAAATAGAGTCGATATTTTAGATCCCGCTATTACAAGACCAGGAAGATTTGATAGA ATTGTTAATATTAACAAACCAGATATTAATGAAAGATCAGAAATATTTCAAGTTCATTTA AAAAATCTAAAATTACATGATTCTTTAGATATTAAAAATATAAGTTATATATTAGCATCG TTAACACCTGGATTTGTTGGTGCAGATATCGCCAACGTTGTAAATGAAGGTGCAATACAA TGTGCAAGACGATCACATATACAAGGTGTACAAATGCATGATTTTGAGTTAGCTATCGAA AGAGTATTAGGTGGATTAGCCAAATCAACTTCACTTATATCTCCGTTAGAAAAAAAAACA ATATCATATCATGAAACGGGTCATGCCCTTATTGGATGGTTTTTAGAATTTGCTGACCCC GTTTTAAAGGTGTCGATAATACCTAGAAGCAATGGTGCACTAGGATATTCTCAGCATCTA AGTGAAGAAATTATGTTATTTTCTAAAGAAGCTATACATGATAAAATTGCAGTTATATTA GGTGGTCGTGCAGCAGAAGAATTATTTATTGGAAAAATAACAACCGGAGCAATTGATGAT TTAAATAAAGTTACACAACTAGCTTATTCATATGTATCTCAATATGGAATGAACAAAGAA ATAGGGTTAGTTTCATTTCAACAAAATGGTGGAAATAATGGTGGTAGCGAATATTCTTTT TATCGACCTCATTCAGAATGCTTAGCACATCTAATTGATAATGAAGCTAGAAATTTAATA GAATCACAATATAATCGAGTTAAAGCTATTTTAAAAAAAAATGAAAAACATGTACATAAT CTTGCTAATTTGCTATATGAAAAAGAAACAATATCATATCACGATATTGTTAAATGCGTT GGAGAAAGACCATATCCCATCAAATCAAACTATGAAAAGTTTGTCAAAGCAAATCCCTAT AAAATGAATCTATCTGCATCTATAGAAGAAAAAACTGGAGAAAAAGCTGAAGAAGCTGAT TCAGAACATGCTCAAAAAAATGAATCCCATAAAGATGCTACCAATAATGAGCATGACAAA AATAGTAACAATTTAAAAAAAAAAAATTCTAAAAATGATAGTGGGGACGTAAATGGAGTT TCTCATGCTACCCCCAATAATAACGATAGAAACAAAAAGGATGAACAGATTTCTAATTTT AACATAAGATAA
  • Download Fasta

  • Fasta :-

    MYRSHMLEKNGRLLLKERKYLKNILESYRFEGVREKKNDLFTINNDGKRCINSLVYTPNF NKISQNKKDGIVITCDKKKYEQDIFSLNYFIDFIQTKFNNKNLKNNSKFVKNVSNLFNKY AKLCYTSNVDYMQQNNEDTKHLKISEEKINNFLKKSFKSYNKINKISSNIINSDAHHPNG LVDNKTEIDGKKKEPNFVETLFNDIVKIYLSKIPKGFERFEKSDSNKNCNGNINNAQQEE EKPKKFDNNFFYLFILLLLCFLLFVDSNSLYNEITQNDFFYNYLSKGYVDKIKLINKDYV KAYLNSHGINKYHLKYVSFRVGNSDSFERKVELIQKEMNIKLDEIIEVQYVNEGNLVGEI KSYIPSILFFLFLVFIFQKITLKNVANSGMDKLFKFNKINPINKNNYKTDIKFSSVAGMK QAKEEIMEFVDFLKNPAKYQVLGAKIPKGALLCGAPGTGKTLLAKAVAGEANVPFFNISG SDFIEVFVGIGPSRVRELFAQARKHAPSIIFIDEIDAVGRKRSKGGFAGGGNDERENTLN QMLVEMDGFHTSNDQVVVLAGTNRVDILDPAITRPGRFDRIVNINKPDINERSEIFQVHL KNLKLHDSLDIKNISYILASLTPGFVGADIANVVNEGAIQCARRSHIQGVQMHDFELAIE RVLGGLAKSTSLISPLEKKTISYHETGHALIGWFLEFADPVLKVSIIPRSNGALGYSQHL SEEIMLFSKEAIHDKIAVILGGRAAEELFIGKITTGAIDDLNKVTQLAYSYVSQYGMNKE IGLVSFQQNGGNNGGSEYSFYRPHSECLAHLIDNEARNLIESQYNRVKAILKKNEKHVHN LANLLYEKETISYHDIVKCVGERPYPIKSNYEKFVKANPYKMNLSASIEEKTGEKAEEAD SEHAQKNESHKDATNNEHDKNSNNLKKKNSKNDSGDVNGVSHATPNNNDRNKKDEQISNF NIR

  • title: ATP binding site
  • coordinates: A455,P456,G457,T458,G459,K460,T461,L462,D513,N563
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0915800852 SKETISYHDI0.992unspPCHAS_0915800852 SKETISYHDI0.992unspPCHAS_0915800852 SKETISYHDI0.992unspPCHAS_0915800887 SNLSASIEEK0.995unspPCHAS_0915800909 SQKNESHKDA0.998unspPCHAS_0915800388 SNVANSGMDK0.992unspPCHAS_0915800682 SKKTISYHET0.993unsp

PCHAS_091580      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India