• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0006629      

  • Computed_GO_Processes:  lipid metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0922600OTHER0.9993950.0002610.000343
No Results
  • Fasta :-

    >PCHAS_0922600 MALNTLNDGLPIANANITPMFNEVQNDSYDLDFINEDSYNDDWRKPLPYDLFNKLGDLDD MERAVLEVTDGDYKVEKHHVYTVDGYKLNLYHIVESDKNYTPLKKKIPKKGVFCIGHGLM ESSINAISGGYNSLPFKLFFKNYDIWLCNNRGNYLTEYVGKKYAMKKNLEQYTIQDLRDI GFDENAYSESSEYEVGRLKKKKKKKLKKNDGKSKKNNQDQPNLTENKSHKNKKETSNTNL QQKTTQNCQSNENDKEPIIGETSKSGIKKQDNLASSAEENVENAENVENVENDEVTNLES MLENNNLFDSCDIDIKKIYELAGITEEDLKYLDDMKKKDIEENINETDEWTFEDMGKKDI PAIIKYIKTKTKQDKIKYIGLSQGSMSFLVGACVNPYVNNSIDRCYLMSLPIILWKKSDI FFALKVFINLSKHFKTIVKLRKYAMDHIPKKLHKRCIIDLSHYITSNVLKFVRNDPYNKD VYYLNTPSGSNSDANMQKWLSSFNKDEPVTDIFEKNNKQCTIPICLIYGDKDCIVDASSS IEYMQQIFQNNELKIIKNSEWSHLDPMAADTDDIIFSHIMKDMKNDNSQKKKKF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0922600.fa Sequence name : PCHAS_0922600 Sequence length : 594 VALUES OF COMPUTED PARAMETERS Coef20 : 3.697 CoefTot : -0.875 ChDiff : -7 ZoneTo : 22 KR : 0 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.447 1.359 0.248 0.521 MesoH : -0.482 0.461 -0.377 0.224 MuHd_075 : 17.060 12.635 3.328 3.475 MuHd_095 : 24.936 20.621 7.177 5.442 MuHd_100 : 23.264 20.682 6.787 5.198 MuHd_105 : 21.298 19.380 6.212 5.207 Hmax_075 : 9.300 9.000 -0.363 4.000 Hmax_095 : 17.150 15.313 2.734 5.679 Hmax_100 : 18.400 19.200 3.534 6.540 Hmax_105 : 11.113 13.737 1.306 4.953 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9092 0.0908 DFMC : 0.9251 0.0749
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 594 PCHAS_0922600 MALNTLNDGLPIANANITPMFNEVQNDSYDLDFINEDSYNDDWRKPLPYDLFNKLGDLDDMERAVLEVTDGDYKVEKHHV 80 YTVDGYKLNLYHIVESDKNYTPLKKKIPKKGVFCIGHGLMESSINAISGGYNSLPFKLFFKNYDIWLCNNRGNYLTEYVG 160 KKYAMKKNLEQYTIQDLRDIGFDENAYSESSEYEVGRLKKKKKKKLKKNDGKSKKNNQDQPNLTENKSHKNKKETSNTNL 240 QQKTTQNCQSNENDKEPIIGETSKSGIKKQDNLASSAEENVENAENVENVENDEVTNLESMLENNNLFDSCDIDIKKIYE 320 LAGITEEDLKYLDDMKKKDIEENINETDEWTFEDMGKKDIPAIIKYIKTKTKQDKIKYIGLSQGSMSFLVGACVNPYVNN 400 SIDRCYLMSLPIILWKKSDIFFALKVFINLSKHFKTIVKLRKYAMDHIPKKLHKRCIIDLSHYITSNVLKFVRNDPYNKD 480 VYYLNTPSGSNSDANMQKWLSSFNKDEPVTDIFEKNNKQCTIPICLIYGDKDCIVDASSSIEYMQQIFQNNELKIIKNSE 560 WSHLDPMAADTDDIIFSHIMKDMKNDNSQKKKKF 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0922600 44 SYNDDWR|KP 0.077 . PCHAS_0922600 45 YNDDWRK|PL 0.073 . PCHAS_0922600 54 PYDLFNK|LG 0.053 . PCHAS_0922600 63 DLDDMER|AV 0.091 . PCHAS_0922600 74 VTDGDYK|VE 0.052 . PCHAS_0922600 77 GDYKVEK|HH 0.065 . PCHAS_0922600 87 YTVDGYK|LN 0.054 . PCHAS_0922600 98 HIVESDK|NY 0.060 . PCHAS_0922600 104 KNYTPLK|KK 0.065 . PCHAS_0922600 105 NYTPLKK|KI 0.086 . PCHAS_0922600 106 YTPLKKK|IP 0.100 . PCHAS_0922600 109 LKKKIPK|KG 0.065 . PCHAS_0922600 110 KKKIPKK|GV 0.280 . PCHAS_0922600 137 YNSLPFK|LF 0.070 . PCHAS_0922600 141 PFKLFFK|NY 0.063 . PCHAS_0922600 151 IWLCNNR|GN 0.077 . PCHAS_0922600 161 LTEYVGK|KY 0.064 . PCHAS_0922600 162 TEYVGKK|YA 0.142 . PCHAS_0922600 166 GKKYAMK|KN 0.066 . PCHAS_0922600 167 KKYAMKK|NL 0.144 . PCHAS_0922600 178 YTIQDLR|DI 0.120 . PCHAS_0922600 197 SEYEVGR|LK 0.092 . PCHAS_0922600 199 YEVGRLK|KK 0.052 . PCHAS_0922600 200 EVGRLKK|KK 0.293 . PCHAS_0922600 201 VGRLKKK|KK 0.088 . PCHAS_0922600 202 GRLKKKK|KK 0.117 . PCHAS_0922600 203 RLKKKKK|KK 0.143 . PCHAS_0922600 204 LKKKKKK|KL 0.133 . PCHAS_0922600 205 KKKKKKK|LK 0.122 . PCHAS_0922600 207 KKKKKLK|KN 0.072 . PCHAS_0922600 208 KKKKLKK|ND 0.149 . PCHAS_0922600 212 LKKNDGK|SK 0.093 . PCHAS_0922600 214 KNDGKSK|KN 0.074 . PCHAS_0922600 215 NDGKSKK|NN 0.134 . PCHAS_0922600 227 PNLTENK|SH 0.070 . PCHAS_0922600 230 TENKSHK|NK 0.071 . PCHAS_0922600 232 NKSHKNK|KE 0.074 . PCHAS_0922600 233 KSHKNKK|ET 0.166 . PCHAS_0922600 243 NTNLQQK|TT 0.071 . PCHAS_0922600 255 QSNENDK|EP 0.074 . PCHAS_0922600 264 IIGETSK|SG 0.090 . PCHAS_0922600 268 TSKSGIK|KQ 0.056 . PCHAS_0922600 269 SKSGIKK|QD 0.121 . PCHAS_0922600 316 SCDIDIK|KI 0.058 . PCHAS_0922600 317 CDIDIKK|IY 0.101 . PCHAS_0922600 330 ITEEDLK|YL 0.063 . PCHAS_0922600 336 KYLDDMK|KK 0.061 . PCHAS_0922600 337 YLDDMKK|KD 0.079 . PCHAS_0922600 338 LDDMKKK|DI 0.190 . PCHAS_0922600 357 TFEDMGK|KD 0.065 . PCHAS_0922600 358 FEDMGKK|DI 0.124 . PCHAS_0922600 365 DIPAIIK|YI 0.065 . PCHAS_0922600 368 AIIKYIK|TK 0.062 . PCHAS_0922600 370 IKYIKTK|TK 0.082 . PCHAS_0922600 372 YIKTKTK|QD 0.066 . PCHAS_0922600 375 TKTKQDK|IK 0.090 . PCHAS_0922600 377 TKQDKIK|YI 0.138 . PCHAS_0922600 404 VNNSIDR|CY 0.100 . PCHAS_0922600 416 LPIILWK|KS 0.064 . PCHAS_0922600 417 PIILWKK|SD 0.092 . PCHAS_0922600 425 DIFFALK|VF 0.054 . PCHAS_0922600 432 VFINLSK|HF 0.062 . PCHAS_0922600 435 NLSKHFK|TI 0.079 . PCHAS_0922600 439 HFKTIVK|LR 0.059 . PCHAS_0922600 441 KTIVKLR|KY 0.079 . PCHAS_0922600 442 TIVKLRK|YA 0.134 . PCHAS_0922600 450 AMDHIPK|KL 0.059 . PCHAS_0922600 451 MDHIPKK|LH 0.094 . PCHAS_0922600 454 IPKKLHK|RC 0.068 . PCHAS_0922600 455 PKKLHKR|CI 0.234 . PCHAS_0922600 470 ITSNVLK|FV 0.096 . PCHAS_0922600 473 NVLKFVR|ND 0.069 . PCHAS_0922600 479 RNDPYNK|DV 0.073 . PCHAS_0922600 498 SDANMQK|WL 0.078 . PCHAS_0922600 505 WLSSFNK|DE 0.072 . PCHAS_0922600 515 VTDIFEK|NN 0.059 . PCHAS_0922600 518 IFEKNNK|QC 0.057 . PCHAS_0922600 531 CLIYGDK|DC 0.060 . PCHAS_0922600 554 FQNNELK|II 0.076 . PCHAS_0922600 557 NELKIIK|NS 0.059 . PCHAS_0922600 581 IFSHIMK|DM 0.071 . PCHAS_0922600 584 HIMKDMK|ND 0.061 . PCHAS_0922600 590 KNDNSQK|KK 0.059 . PCHAS_0922600 591 NDNSQKK|KK 0.115 . PCHAS_0922600 592 DNSQKKK|KF 0.156 . PCHAS_0922600 593 NSQKKKK|F- 0.189 . ____________________________^_________________
  • Fasta :-

    >PCHAS_0922600 ATGGCATTAAATACTTTGAATGATGGATTGCCAATAGCGAATGCAAATATAACTCCTATG TTTAATGAAGTACAAAATGATTCATATGATTTGGATTTTATAAATGAAGATAGTTACAAT GATGATTGGAGAAAACCACTACCCTATGATTTATTTAACAAATTGGGAGATCTTGATGAT ATGGAACGAGCAGTTCTTGAAGTAACTGATGGAGACTATAAAGTAGAAAAACATCATGTT TATACTGTCGATGGTTATAAATTAAATTTATATCATATTGTAGAATCAGATAAAAATTAT ACACCATTAAAAAAAAAAATTCCTAAGAAAGGGGTATTTTGTATAGGCCATGGTTTGATG GAATCCTCTATAAATGCAATATCAGGGGGATATAATTCGCTGCCTTTTAAATTATTTTTT AAAAATTATGATATTTGGTTATGTAATAATAGGGGAAATTATTTAACAGAATATGTTGGA AAAAAATATGCCATGAAAAAAAATTTAGAACAATATACAATTCAGGACTTGCGCGATATT GGGTTTGATGAAAATGCATATTCTGAAAGCTCGGAATATGAGGTGGGTCGTTTAAAAAAA AAAAAAAAAAAAAAATTAAAAAAAAATGATGGCAAATCAAAGAAAAATAATCAAGACCAA CCTAACCTAACGGAAAATAAATCTCATAAGAATAAAAAAGAAACTAGCAATACTAATTTG CAACAAAAAACAACACAAAATTGTCAAAGTAATGAGAATGACAAAGAACCCATAATTGGT GAGACTTCTAAAAGTGGAATCAAAAAACAGGACAACTTAGCTAGTAGTGCAGAAGAAAAT GTTGAAAATGCTGAAAATGTTGAAAATGTTGAAAATGACGAAGTGACAAATTTAGAGAGT ATGTTAGAAAATAATAATTTATTTGACTCATGCGATATAGATATTAAAAAAATTTATGAG CTAGCTGGTATAACAGAAGAAGATTTAAAATATCTTGATGATATGAAAAAAAAAGATATT GAAGAAAATATTAATGAAACAGATGAATGGACATTTGAAGATATGGGTAAAAAGGATATA CCTGCAATAATTAAATATATAAAAACAAAAACAAAACAAGATAAAATAAAATATATTGGA TTATCACAAGGATCTATGTCATTTTTGGTTGGAGCTTGTGTAAACCCTTATGTTAATAAT AGTATAGACCGTTGCTATTTAATGTCATTACCTATTATTTTATGGAAAAAATCAGATATA TTTTTTGCCTTAAAAGTATTTATAAACCTATCAAAACATTTTAAAACGATAGTAAAATTA AGAAAGTATGCTATGGATCATATTCCAAAAAAATTACATAAACGTTGCATAATTGATTTA TCTCATTATATAACTTCAAATGTTTTAAAATTTGTTCGAAATGATCCATATAATAAAGAT GTATATTATTTAAATACTCCAAGCGGGTCAAATTCTGATGCTAATATGCAAAAATGGTTA TCATCCTTCAATAAAGACGAACCAGTAACAGACATTTTTGAAAAAAATAATAAACAATGT ACAATTCCTATATGTCTTATATATGGTGATAAAGATTGTATTGTTGATGCAAGTTCCTCT ATCGAATATATGCAACAGATTTTTCAAAATAACGAATTGAAAATTATTAAAAATTCCGAA TGGTCTCATTTAGATCCAATGGCTGCAGATACTGATGATATCATTTTTTCTCATATTATG AAAGATATGAAAAATGACAACTCTCAAAAAAAAAAAAAATTTTAA
  • Download Fasta
  • Fasta :-

    MALNTLNDGLPIANANITPMFNEVQNDSYDLDFINEDSYNDDWRKPLPYDLFNKLGDLDD MERAVLEVTDGDYKVEKHHVYTVDGYKLNLYHIVESDKNYTPLKKKIPKKGVFCIGHGLM ESSINAISGGYNSLPFKLFFKNYDIWLCNNRGNYLTEYVGKKYAMKKNLEQYTIQDLRDI GFDENAYSESSEYEVGRLKKKKKKKLKKNDGKSKKNNQDQPNLTENKSHKNKKETSNTNL QQKTTQNCQSNENDKEPIIGETSKSGIKKQDNLASSAEENVENAENVENVENDEVTNLES MLENNNLFDSCDIDIKKIYELAGITEEDLKYLDDMKKKDIEENINETDEWTFEDMGKKDI PAIIKYIKTKTKQDKIKYIGLSQGSMSFLVGACVNPYVNNSIDRCYLMSLPIILWKKSDI FFALKVFINLSKHFKTIVKLRKYAMDHIPKKLHKRCIIDLSHYITSNVLKFVRNDPYNKD VYYLNTPSGSNSDANMQKWLSSFNKDEPVTDIFEKNNKQCTIPICLIYGDKDCIVDASSS IEYMQQIFQNNELKIIKNSEWSHLDPMAADTDDIIFSHIMKDMKNDNSQKKKKF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0922600213 SNDGKSKKNN0.996unspPCHAS_0922600276 SNLASSAEEN0.997unsp

PCHAS_092260      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India