PCHAS_1000900 | lysophospholipase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1000900OTHER0.9997450.0000760.000179
No Results

  • Fasta :-

    >PCHAS_1000900 MEEIELNNDELRSATVSKLDGDPKIGWLCNKNGLLLKTYEWLAHNAIGIILLIHGLKAHT RLTFMRINIKMSNNNEGIIVDSDNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQAWKNT RGDFSSFDDLVDDVIQYMYQIQNEISNDNQTNDIVTTKKKKLPMYIIGHSVGGNIAIRIL QLLREKKEGNINAGDENYYKKCNIMLDDLTNANEINNDTVEDMIDDMNNFNDSPVKDIWY KRCISNSNNDDPYIYIANTSDKDERFYNNLYKLNIKGCVSLSGMMKLNAIRKAGDRSIRY LYLPLAKFLSRVAPNAVFSPKSGLKHSEYVADIYKYDKFRNSDKIKFKCISELIKATVTL NCNINHMPTDIPLLFVHSKDDNVCCFEAAYSFYNKANVPGKKFHTVDGMNHAITAAPGNE EILNEILNWISNLRRKNEEQEYEIKDVIKDEAEDIIKDETEGIIKDETEDIIKDENESEI QNVF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1000900.fa Sequence name : PCHAS_1000900 Sequence length : 484 VALUES OF COMPUTED PARAMETERS Coef20 : 3.554 CoefTot : 0.000 ChDiff : -18 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.688 1.412 -0.021 0.629 MesoH : -0.844 0.096 -0.501 0.165 MuHd_075 : 24.811 17.154 6.704 5.820 MuHd_095 : 11.471 7.386 3.618 1.150 MuHd_100 : 11.832 5.167 1.751 1.612 MuHd_105 : 21.870 8.532 4.504 3.647 Hmax_075 : -7.233 2.100 -4.183 1.528 Hmax_095 : -4.000 5.700 -2.369 0.910 Hmax_100 : -7.900 -1.400 -5.194 0.050 Hmax_105 : -2.100 3.800 -3.106 1.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9116 0.0884 DFMC : 0.9523 0.0477
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 484 PCHAS_1000900 MEEIELNNDELRSATVSKLDGDPKIGWLCNKNGLLLKTYEWLAHNAIGIILLIHGLKAHTRLTFMRINIKMSNNNEGIIV 80 DSDNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQAWKNTRGDFSSFDDLVDDVIQYMYQIQNEISNDNQTNDIVTTKKK 160 KLPMYIIGHSVGGNIAIRILQLLREKKEGNINAGDENYYKKCNIMLDDLTNANEINNDTVEDMIDDMNNFNDSPVKDIWY 240 KRCISNSNNDDPYIYIANTSDKDERFYNNLYKLNIKGCVSLSGMMKLNAIRKAGDRSIRYLYLPLAKFLSRVAPNAVFSP 320 KSGLKHSEYVADIYKYDKFRNSDKIKFKCISELIKATVTLNCNINHMPTDIPLLFVHSKDDNVCCFEAAYSFYNKANVPG 400 KKFHTVDGMNHAITAAPGNEEILNEILNWISNLRRKNEEQEYEIKDVIKDEAEDIIKDETEGIIKDETEDIIKDENESEI 480 QNVF 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1000900 12 LNNDELR|SA 0.168 . PCHAS_1000900 18 RSATVSK|LD 0.075 . PCHAS_1000900 24 KLDGDPK|IG 0.058 . PCHAS_1000900 31 IGWLCNK|NG 0.053 . PCHAS_1000900 37 KNGLLLK|TY 0.062 . PCHAS_1000900 57 LLIHGLK|AH 0.059 . PCHAS_1000900 61 GLKAHTR|LT 0.104 . PCHAS_1000900 66 TRLTFMR|IN 0.110 . PCHAS_1000900 70 FMRINIK|MS 0.064 . PCHAS_1000900 89 DNYYIYK|DS 0.074 . PCHAS_1000900 95 KDSWIEK|FN 0.080 . PCHAS_1000900 118 GESQAWK|NT 0.080 . PCHAS_1000900 121 QAWKNTR|GD 0.117 . PCHAS_1000900 158 NDIVTTK|KK 0.056 . PCHAS_1000900 159 DIVTTKK|KK 0.077 . PCHAS_1000900 160 IVTTKKK|KL 0.094 . PCHAS_1000900 161 VTTKKKK|LP 0.095 . PCHAS_1000900 178 GGNIAIR|IL 0.078 . PCHAS_1000900 184 RILQLLR|EK 0.068 . PCHAS_1000900 186 LQLLREK|KE 0.059 . PCHAS_1000900 187 QLLREKK|EG 0.182 . PCHAS_1000900 200 GDENYYK|KC 0.066 . PCHAS_1000900 201 DENYYKK|CN 0.095 . PCHAS_1000900 236 FNDSPVK|DI 0.075 . PCHAS_1000900 241 VKDIWYK|RC 0.057 . PCHAS_1000900 242 KDIWYKR|CI 0.257 . PCHAS_1000900 262 IANTSDK|DE 0.071 . PCHAS_1000900 265 TSDKDER|FY 0.091 . PCHAS_1000900 272 FYNNLYK|LN 0.069 . PCHAS_1000900 276 LYKLNIK|GC 0.057 . PCHAS_1000900 286 SLSGMMK|LN 0.064 . PCHAS_1000900 291 MKLNAIR|KA 0.089 . PCHAS_1000900 292 KLNAIRK|AG 0.101 . PCHAS_1000900 296 IRKAGDR|SI 0.121 . PCHAS_1000900 299 AGDRSIR|YL 0.201 . PCHAS_1000900 307 LYLPLAK|FL 0.071 . PCHAS_1000900 311 LAKFLSR|VA 0.093 . PCHAS_1000900 321 NAVFSPK|SG 0.076 . PCHAS_1000900 325 SPKSGLK|HS 0.067 . PCHAS_1000900 335 YVADIYK|YD 0.055 . PCHAS_1000900 338 DIYKYDK|FR 0.056 . PCHAS_1000900 340 YKYDKFR|NS 0.117 . PCHAS_1000900 344 KFRNSDK|IK 0.069 . PCHAS_1000900 346 RNSDKIK|FK 0.106 . PCHAS_1000900 348 SDKIKFK|CI 0.092 . PCHAS_1000900 355 CISELIK|AT 0.068 . PCHAS_1000900 379 LLFVHSK|DD 0.072 . PCHAS_1000900 395 AYSFYNK|AN 0.072 . PCHAS_1000900 401 KANVPGK|KF 0.085 . PCHAS_1000900 402 ANVPGKK|FH 0.103 . PCHAS_1000900 434 NWISNLR|RK 0.073 . PCHAS_1000900 435 WISNLRR|KN 0.212 . PCHAS_1000900 436 ISNLRRK|NE 0.104 . PCHAS_1000900 445 EQEYEIK|DV 0.088 . PCHAS_1000900 449 EIKDVIK|DE 0.064 . PCHAS_1000900 457 EAEDIIK|DE 0.061 . PCHAS_1000900 465 ETEGIIK|DE 0.056 . PCHAS_1000900 473 ETEDIIK|DE 0.066 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1000900 ATGGAAGAAATTGAATTGAATAATGATGAGTTAAGAAGTGCTACAGTAAGTAAATTAGAT GGCGATCCTAAGATAGGTTGGCTATGTAATAAAAATGGTCTACTTTTAAAAACATATGAA TGGCTAGCTCATAATGCCATAGGAATTATATTGTTAATACATGGATTAAAAGCGCATACT CGATTAACTTTTATGAGAATAAATATAAAAATGTCAAATAACAATGAAGGCATAATAGTA GACAGTGATAATTATTATATTTACAAAGATAGTTGGATTGAAAAATTTAATCAAAATGGT TATTCAGTATATGCACTAGATTTACAAGGACATGGCGAATCACAAGCATGGAAAAATACA AGAGGGGATTTTAGTTCTTTTGATGATTTAGTTGATGATGTAATACAATATATGTATCAA ATTCAAAATGAAATCTCAAATGATAATCAAACGAATGATATAGTAACAACTAAAAAAAAA AAACTTCCTATGTATATTATTGGCCATTCGGTGGGCGGAAATATTGCTATAAGAATATTA CAATTATTAAGGGAAAAAAAAGAAGGTAACATTAATGCTGGAGATGAAAATTACTATAAA AAATGTAACATCATGCTAGACGACCTTACTAATGCTAATGAAATTAACAATGATACGGTA GAAGATATGATTGATGATATGAATAATTTTAATGATAGTCCTGTAAAAGATATTTGGTAT AAGCGTTGCATTTCGAATTCTAATAATGATGACCCTTATATTTATATTGCTAATACTAGT GATAAAGATGAAAGATTCTATAATAATTTATATAAATTAAATATTAAAGGTTGCGTATCG TTGTCTGGTATGATGAAATTAAATGCAATACGGAAGGCTGGAGATAGATCAATTAGGTAT TTGTATTTACCTTTAGCAAAGTTTCTGTCTCGTGTGGCGCCTAATGCAGTATTTTCGCCA AAATCGGGTCTTAAACATTCCGAATATGTTGCTGATATATATAAATATGACAAATTTCGA AATTCTGATAAAATTAAATTTAAATGTATTTCTGAACTTATAAAAGCAACGGTCACATTG AATTGTAATATTAATCATATGCCAACAGATATCCCTTTATTATTTGTGCATTCAAAAGAT GATAATGTTTGTTGTTTTGAAGCGGCATATTCATTTTATAATAAAGCAAATGTTCCTGGA AAAAAATTCCATACTGTTGATGGTATGAATCATGCTATAACGGCAGCGCCAGGAAACGAA GAAATTTTAAACGAAATTCTTAATTGGATTTCTAATTTAAGAAGGAAGAATGAAGAGCAA GAATATGAAATAAAAGACGTAATAAAAGATGAAGCGGAAGACATAATAAAAGATGAAACA GAAGGCATAATAAAAGATGAAACAGAAGACATAATAAAAGATGAAAATGAAAGTGAAATA CAAAATGTGTTTTAA
  • Download Fasta

  • Fasta :-

    MEEIELNNDELRSATVSKLDGDPKIGWLCNKNGLLLKTYEWLAHNAIGIILLIHGLKAHT RLTFMRINIKMSNNNEGIIVDSDNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQAWKNT RGDFSSFDDLVDDVIQYMYQIQNEISNDNQTNDIVTTKKKKLPMYIIGHSVGGNIAIRIL QLLREKKEGNINAGDENYYKKCNIMLDDLTNANEINNDTVEDMIDDMNNFNDSPVKDIWY KRCISNSNNDDPYIYIANTSDKDERFYNNLYKLNIKGCVSLSGMMKLNAIRKAGDRSIRY LYLPLAKFLSRVAPNAVFSPKSGLKHSEYVADIYKYDKFRNSDKIKFKCISELIKATVTL NCNINHMPTDIPLLFVHSKDDNVCCFEAAYSFYNKANVPGKKFHTVDGMNHAITAAPGNE EILNEILNWISNLRRKNEEQEYEIKDVIKDEAEDIIKDETEGIIKDETEDIIKDENESEI QNVF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1000900260 SIANTSDKDE0.997unspPCHAS_1000900260 SIANTSDKDE0.997unspPCHAS_1000900260 SIANTSDKDE0.997unspPCHAS_1000900319 SNAVFSPKSG0.995unspPCHAS_1000900342 SKFRNSDKIK0.992unspPCHAS_100090017 SSATVSKLDG0.995unspPCHAS_1000900125 SRGDFSSFDD0.993unsp

PCHAS_100090      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India