PCHAS_1002400 | alpha/beta hydrolase, putative

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  • Computed_GO_Function_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1002400OTHER0.9933680.0027210.003911
No Results

  • Fasta :-

    >PCHAS_1002400 MGNTVLNYFVFRPHPPSYSINNANLHFMKTKHGSSICGFYLNNNEDTTILFSHGNAEDIG DVVEYYNNYCKCIGVNMFLYDYSGYGHSTGYPSEEHVYNDVEAVYSYMTKTLCIPGGSIV AYGRSLGSTASVHIATKKKIKGLILQCPIASIHRVKLRLKSTLPFDFFCNIDKISNVKCP VLFIHGTNDTLIPYQGTVDMIMRTKVNTYYALIEGGGHNNLERCYYKQLHTSIFAFLHIL KTNVHEGMKISHDIASLSLFEFIKKYTLNEDPAQMKLKNVMNKIKKSNYETKPEKKRNSP LYRIDLNPPQLSDSENNDNIFKKSRESSNASRSYPSLTSISTIFDTDESTADGIPNKAFS ENSNNMSLEDISAFLCNNIPIRHLYKIRRWEKSIIENYNKNKKLEIDKNEIKELYRDYLY GPPDIDVYNFNNNNSYTCTKLENIKQNTKDSNFIGGSNTSKIGSSASKIGSNASKSGSNT SKTGSNASKSGSNTSKIGSNTSKTGSNASKTGSSASKSGSKIKSDNGKNKIIYDASGKLD GNNNSIASKKGEKNGSANYIYNQKKSMNTKSNLKSDNKQGLEKMPSNGASGSMSSTKREE LSSREGIANFCNIKSESNISSNMSATSDKKIIAKKGNKSRTNSHEKGGSNSSGNISVNDP PKSDASKCYWSDKVGNNKIEINKLKGKIQVNNNNISKYYETSPNETNFFDIPQENNALES SN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1002400.fa Sequence name : PCHAS_1002400 Sequence length : 722 VALUES OF COMPUTED PARAMETERS Coef20 : 3.513 CoefTot : -2.905 ChDiff : 27 ZoneTo : 44 KR : 3 DE : 0 CleavSite : 14 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.871 0.918 0.160 0.403 MesoH : -0.361 0.451 -0.288 0.205 MuHd_075 : 31.408 26.253 8.584 7.838 MuHd_095 : 22.748 15.992 8.351 4.526 MuHd_100 : 20.769 17.633 7.103 4.117 MuHd_105 : 23.898 18.510 7.387 5.082 Hmax_075 : 8.400 11.200 0.501 4.690 Hmax_095 : 9.800 17.100 0.561 3.320 Hmax_100 : 9.800 11.300 0.561 3.230 Hmax_105 : 10.033 3.850 2.646 3.827 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3570 0.6430 DFMC : 0.4712 0.5288 This protein is probably imported in mitochondria. f(Ser) = 0.0909 f(Arg) = 0.0227 CMi = 0.89286 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 722 PCHAS_1002400 MGNTVLNYFVFRPHPPSYSINNANLHFMKTKHGSSICGFYLNNNEDTTILFSHGNAEDIGDVVEYYNNYCKCIGVNMFLY 80 DYSGYGHSTGYPSEEHVYNDVEAVYSYMTKTLCIPGGSIVAYGRSLGSTASVHIATKKKIKGLILQCPIASIHRVKLRLK 160 STLPFDFFCNIDKISNVKCPVLFIHGTNDTLIPYQGTVDMIMRTKVNTYYALIEGGGHNNLERCYYKQLHTSIFAFLHIL 240 KTNVHEGMKISHDIASLSLFEFIKKYTLNEDPAQMKLKNVMNKIKKSNYETKPEKKRNSPLYRIDLNPPQLSDSENNDNI 320 FKKSRESSNASRSYPSLTSISTIFDTDESTADGIPNKAFSENSNNMSLEDISAFLCNNIPIRHLYKIRRWEKSIIENYNK 400 NKKLEIDKNEIKELYRDYLYGPPDIDVYNFNNNNSYTCTKLENIKQNTKDSNFIGGSNTSKIGSSASKIGSNASKSGSNT 480 SKTGSNASKSGSNTSKIGSNTSKTGSNASKTGSSASKSGSKIKSDNGKNKIIYDASGKLDGNNNSIASKKGEKNGSANYI 560 YNQKKSMNTKSNLKSDNKQGLEKMPSNGASGSMSSTKREELSSREGIANFCNIKSESNISSNMSATSDKKIIAKKGNKSR 640 TNSHEKGGSNSSGNISVNDPPKSDASKCYWSDKVGNNKIEINKLKGKIQVNNNNISKYYETSPNETNFFDIPQENNALES 720 SN 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1002400 12 LNYFVFR|PH 0.088 . PCHAS_1002400 29 ANLHFMK|TK 0.065 . PCHAS_1002400 31 LHFMKTK|HG 0.077 . PCHAS_1002400 71 YYNNYCK|CI 0.075 . PCHAS_1002400 110 VYSYMTK|TL 0.071 . PCHAS_1002400 124 SIVAYGR|SL 0.133 . PCHAS_1002400 137 SVHIATK|KK 0.068 . PCHAS_1002400 138 VHIATKK|KI 0.103 . PCHAS_1002400 139 HIATKKK|IK 0.145 . PCHAS_1002400 141 ATKKKIK|GL 0.072 . PCHAS_1002400 154 PIASIHR|VK 0.068 . PCHAS_1002400 156 ASIHRVK|LR 0.060 . PCHAS_1002400 158 IHRVKLR|LK 0.122 . PCHAS_1002400 160 RVKLRLK|ST 0.070 . PCHAS_1002400 173 FFCNIDK|IS 0.059 . PCHAS_1002400 178 DKISNVK|CP 0.056 . PCHAS_1002400 203 TVDMIMR|TK 0.070 . PCHAS_1002400 205 DMIMRTK|VN 0.056 . PCHAS_1002400 223 GHNNLER|CY 0.154 . PCHAS_1002400 227 LERCYYK|QL 0.086 . PCHAS_1002400 241 AFLHILK|TN 0.056 . PCHAS_1002400 249 NVHEGMK|IS 0.062 . PCHAS_1002400 264 SLFEFIK|KY 0.064 . PCHAS_1002400 265 LFEFIKK|YT 0.093 . PCHAS_1002400 276 EDPAQMK|LK 0.060 . PCHAS_1002400 278 PAQMKLK|NV 0.099 . PCHAS_1002400 283 LKNVMNK|IK 0.072 . PCHAS_1002400 285 NVMNKIK|KS 0.064 . PCHAS_1002400 286 VMNKIKK|SN 0.144 . PCHAS_1002400 292 KSNYETK|PE 0.069 . PCHAS_1002400 295 YETKPEK|KR 0.054 . PCHAS_1002400 296 ETKPEKK|RN 0.087 . PCHAS_1002400 297 TKPEKKR|NS 0.154 . PCHAS_1002400 303 RNSPLYR|ID 0.091 . PCHAS_1002400 322 NNDNIFK|KS 0.058 . PCHAS_1002400 323 NDNIFKK|SR 0.210 . PCHAS_1002400 325 NIFKKSR|ES 0.101 . PCHAS_1002400 332 ESSNASR|SY 0.121 . PCHAS_1002400 357 ADGIPNK|AF 0.070 . PCHAS_1002400 382 CNNIPIR|HL 0.139 . PCHAS_1002400 386 PIRHLYK|IR 0.062 . PCHAS_1002400 388 RHLYKIR|RW 0.109 . PCHAS_1002400 389 HLYKIRR|WE 0.132 . PCHAS_1002400 392 KIRRWEK|SI 0.240 . PCHAS_1002400 400 IIENYNK|NK 0.055 . PCHAS_1002400 402 ENYNKNK|KL 0.073 . PCHAS_1002400 403 NYNKNKK|LE 0.086 . PCHAS_1002400 408 KKLEIDK|NE 0.057 . PCHAS_1002400 412 IDKNEIK|EL 0.060 . PCHAS_1002400 416 EIKELYR|DY 0.098 . PCHAS_1002400 440 NSYTCTK|LE 0.065 . PCHAS_1002400 445 TKLENIK|QN 0.060 . PCHAS_1002400 449 NIKQNTK|DS 0.065 . PCHAS_1002400 461 GGSNTSK|IG 0.071 . PCHAS_1002400 468 IGSSASK|IG 0.071 . PCHAS_1002400 475 IGSNASK|SG 0.094 . PCHAS_1002400 482 SGSNTSK|TG 0.077 . PCHAS_1002400 489 TGSNASK|SG 0.094 . PCHAS_1002400 496 SGSNTSK|IG 0.074 . PCHAS_1002400 503 IGSNTSK|TG 0.077 . PCHAS_1002400 510 TGSNASK|TG 0.079 . PCHAS_1002400 517 TGSSASK|SG 0.109 . PCHAS_1002400 521 ASKSGSK|IK 0.069 . PCHAS_1002400 523 KSGSKIK|SD 0.102 . PCHAS_1002400 528 IKSDNGK|NK 0.076 . PCHAS_1002400 530 SDNGKNK|II 0.091 . PCHAS_1002400 538 IYDASGK|LD 0.059 . PCHAS_1002400 549 NNSIASK|KG 0.072 . PCHAS_1002400 550 NSIASKK|GE 0.104 . PCHAS_1002400 553 ASKKGEK|NG 0.058 . PCHAS_1002400 564 NYIYNQK|KS 0.054 . PCHAS_1002400 565 YIYNQKK|SM 0.139 . PCHAS_1002400 570 KKSMNTK|SN 0.099 . PCHAS_1002400 574 NTKSNLK|SD 0.070 . PCHAS_1002400 578 NLKSDNK|QG 0.058 . PCHAS_1002400 583 NKQGLEK|MP 0.070 . PCHAS_1002400 597 GSMSSTK|RE 0.064 . PCHAS_1002400 598 SMSSTKR|EE 0.189 . PCHAS_1002400 604 REELSSR|EG 0.087 . PCHAS_1002400 614 ANFCNIK|SE 0.073 . PCHAS_1002400 629 MSATSDK|KI 0.079 . PCHAS_1002400 630 SATSDKK|II 0.098 . PCHAS_1002400 634 DKKIIAK|KG 0.069 . PCHAS_1002400 635 KKIIAKK|GN 0.106 . PCHAS_1002400 638 IAKKGNK|SR 0.067 . PCHAS_1002400 640 KKGNKSR|TN 0.131 . PCHAS_1002400 646 RTNSHEK|GG 0.072 . PCHAS_1002400 662 SVNDPPK|SD 0.082 . PCHAS_1002400 667 PKSDASK|CY 0.070 . PCHAS_1002400 673 KCYWSDK|VG 0.062 . PCHAS_1002400 678 DKVGNNK|IE 0.063 . PCHAS_1002400 683 NKIEINK|LK 0.068 . PCHAS_1002400 685 IEINKLK|GK 0.081 . PCHAS_1002400 687 INKLKGK|IQ 0.062 . PCHAS_1002400 697 NNNNISK|YY 0.081 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1002400 ATGGGTAATACGGTACTAAATTATTTTGTCTTTCGCCCACATCCACCGAGTTATTCAATC AACAATGCAAATTTACATTTTATGAAAACAAAACATGGAAGTTCTATATGCGGTTTTTAT TTAAACAATAATGAAGATACAACAATATTGTTTAGTCATGGAAATGCAGAAGATATAGGT GATGTTGTAGAGTATTATAATAACTATTGTAAGTGTATAGGTGTAAATATGTTTTTGTAT GACTATAGCGGGTATGGTCATAGCACAGGGTATCCTAGTGAAGAGCATGTATATAATGAT GTAGAAGCGGTATATAGTTATATGACTAAAACATTATGTATCCCAGGAGGAAGCATAGTA GCATATGGTAGAAGTTTAGGCTCTACTGCCTCTGTACATATTGCTACAAAAAAAAAAATA AAGGGTTTAATACTTCAATGTCCAATAGCGTCAATACACCGAGTGAAACTTCGATTAAAG AGCACATTACCCTTTGATTTTTTTTGTAATATAGATAAAATATCTAATGTTAAATGTCCT GTTTTATTTATACATGGTACGAATGATACATTGATACCATATCAAGGAACAGTGGACATG ATTATGAGAACAAAAGTAAATACATATTATGCCCTTATTGAAGGAGGCGGCCATAATAAT TTAGAAAGGTGTTATTATAAGCAATTACATACATCTATTTTTGCATTCCTTCATATTTTG AAAACTAATGTACACGAGGGTATGAAAATTTCACATGACATCGCATCATTAAGTCTTTTC GAATTCATAAAAAAATATACATTAAATGAAGATCCTGCTCAAATGAAATTAAAAAATGTT ATGAATAAAATTAAAAAATCCAATTATGAAACAAAACCTGAAAAAAAACGTAATTCACCA TTATATCGAATAGATCTAAACCCTCCTCAACTGTCAGATAGCGAAAATAATGATAATATA TTTAAAAAATCCCGAGAAAGTAGCAATGCGAGCAGATCTTATCCATCTTTGACAAGTATC AGTACTATATTCGACACAGACGAATCGACAGCTGACGGAATTCCGAATAAAGCATTTAGT GAAAATAGCAATAATATGAGTCTTGAAGATATTTCAGCATTTTTGTGTAATAATATACCC ATTCGACATTTGTATAAAATTAGAAGATGGGAAAAAAGTATTATTGAGAATTATAATAAA AATAAGAAACTAGAAATTGATAAAAATGAAATCAAGGAACTATATCGTGATTACTTGTAT GGACCACCTGATATTGATGTATACAATTTCAATAATAACAATTCGTATACATGTACTAAA TTGGAGAATATAAAACAAAATACAAAAGACAGCAATTTTATAGGTGGAAGTAACACTAGT AAAATTGGAAGTAGCGCTAGTAAAATTGGAAGTAACGCTAGTAAAAGTGGAAGTAACACT AGCAAAACTGGAAGTAACGCTAGTAAAAGTGGAAGTAACACTAGTAAAATTGGAAGTAAC ACTAGCAAAACTGGAAGTAACGCTAGCAAAACTGGAAGTAGCGCTAGTAAAAGTGGAAGT AAAATCAAAAGTGATAATGGTAAGAATAAAATAATTTATGATGCTTCTGGAAAATTAGAC GGAAATAACAATAGTATTGCATCGAAAAAAGGGGAAAAAAATGGAAGTGCCAACTACATA TATAACCAAAAGAAAAGCATGAATACAAAGAGTAATTTAAAAAGTGATAATAAACAAGGT TTAGAAAAAATGCCCTCAAATGGAGCAAGTGGTAGTATGAGTTCTACAAAAAGAGAAGAA TTATCAAGCAGAGAAGGGATAGCAAATTTTTGTAATATAAAAAGTGAATCAAATATAAGT AGTAATATGTCTGCAACTAGCGATAAGAAAATCATCGCTAAGAAGGGAAATAAAAGTAGA ACTAATAGCCATGAAAAGGGTGGTAGTAATTCCAGTGGTAATATTAGTGTAAATGACCCA CCGAAGAGTGATGCTTCTAAATGTTATTGGAGTGATAAGGTGGGTAATAATAAAATTGAA ATAAATAAGTTGAAGGGAAAAATTCAAGTAAATAATAATAACATTAGTAAGTATTATGAA ACTTCACCTAATGAAACAAACTTTTTTGATATTCCTCAAGAAAATAATGCTTTGGAATCC TCAAATTAA
  • Download Fasta

  • Fasta :-

    MGNTVLNYFVFRPHPPSYSINNANLHFMKTKHGSSICGFYLNNNEDTTILFSHGNAEDIG DVVEYYNNYCKCIGVNMFLYDYSGYGHSTGYPSEEHVYNDVEAVYSYMTKTLCIPGGSIV AYGRSLGSTASVHIATKKKIKGLILQCPIASIHRVKLRLKSTLPFDFFCNIDKISNVKCP VLFIHGTNDTLIPYQGTVDMIMRTKVNTYYALIEGGGHNNLERCYYKQLHTSIFAFLHIL KTNVHEGMKISHDIASLSLFEFIKKYTLNEDPAQMKLKNVMNKIKKSNYETKPEKKRNSP LYRIDLNPPQLSDSENNDNIFKKSRESSNASRSYPSLTSISTIFDTDESTADGIPNKAFS ENSNNMSLEDISAFLCNNIPIRHLYKIRRWEKSIIENYNKNKKLEIDKNEIKELYRDYLY GPPDIDVYNFNNNNSYTCTKLENIKQNTKDSNFIGGSNTSKIGSSASKIGSNASKSGSNT SKTGSNASKSGSNTSKIGSNTSKTGSNASKTGSSASKSGSKIKSDNGKNKIIYDASGKLD GNNNSIASKKGEKNGSANYIYNQKKSMNTKSNLKSDNKQGLEKMPSNGASGSMSSTKREE LSSREGIANFCNIKSESNISSNMSATSDKKIIAKKGNKSRTNSHEKGGSNSSGNISVNDP PKSDASKCYWSDKVGNNKIEINKLKGKIQVNNNNISKYYETSPNETNFFDIPQENNALES SN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1002400367 SSNNMSLEDI0.991unspPCHAS_1002400367 SSNNMSLEDI0.991unspPCHAS_1002400367 SSNNMSLEDI0.991unspPCHAS_1002400476 SNASKSGSNT0.993unspPCHAS_1002400490 SNASKSGSNT0.993unspPCHAS_1002400595 SGSMSSTKRE0.995unspPCHAS_1002400602 SREELSSREG0.996unspPCHAS_1002400643 SSRTNSHEKG0.996unspPCHAS_1002400656 SSGNISVNDP0.991unspPCHAS_1002400287 SKIKKSNYET0.992unspPCHAS_1002400327 SKSRESSNAS0.996unsp

PCHAS_100240      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India