PCHAS_1011100 | methionine aminopeptidase 2, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1011100OTHER0.9999880.0000000.000012
No Results

  • Fasta :-

    >PCHAS_1011100 MNKRDGKNKSGNQKEKGGKSEGSKISNKTPQNEKTVKENEKKEDNLIEEMKIGNEVNASE KNDCTKNENKENKTQDNKNNNDTKKKNNKKGNNNNGGNKSGNANNQGNEKGGKKSKGKKK GDKLDSILDEFKKEIGEIKIKKCEEKKEEKVEEIKYKIDFDLDEIKKIKKSIVIKEHLVE EQDNKHIRLLKNWPQVENSIQTSPATIPIEMVYKNNNYPVGEILNYNNYVLSGQSLQEKK ELEKLSIDYYQDLRKAAECHRQVRKYIQTYIKPGRKMIDIVQKTEQKTKELILSHKLKCG WGFPTGCSLNNCAAHYTPNYGDETVLKEDDVCKLDFGVHVNGYIIDCAFTIAFNDKYDNL IKATQDGTNTGIKEAGIDARMCDIGEAIQEAIESYEIELNQKVYPIKPISNLRGHSICKY VIHGGKCVPIVKQQEKHEIMEEGDLFAIETFASTGKGYVVHENDCSHYMRNRDVQYAPIR LNSAKTLLKVINDKFDTLPFCNRWLDDLGQTRHFMSLKTLIDLNIVEPYPPLCDIKNSFT SQMEHTILLRPTCKEVLSRGPDF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1011100.fa Sequence name : PCHAS_1011100 Sequence length : 563 VALUES OF COMPUTED PARAMETERS Coef20 : 2.637 CoefTot : -0.112 ChDiff : 8 ZoneTo : 4 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.741 1.212 0.054 0.554 MesoH : -1.018 -0.010 -0.465 0.149 MuHd_075 : 19.652 10.114 5.272 4.574 MuHd_095 : 16.886 3.996 4.009 2.927 MuHd_100 : 11.065 3.303 3.164 1.116 MuHd_105 : 7.987 4.923 3.112 0.945 Hmax_075 : -13.300 -7.817 -5.143 -0.257 Hmax_095 : -18.287 -12.338 -7.668 -2.284 Hmax_100 : -22.800 -13.700 -8.627 -3.200 Hmax_105 : -22.283 -11.600 -8.125 -3.420 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9774 0.0226 DFMC : 0.9712 0.0288
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 563 PCHAS_1011100 MNKRDGKNKSGNQKEKGGKSEGSKISNKTPQNEKTVKENEKKEDNLIEEMKIGNEVNASEKNDCTKNENKENKTQDNKNN 80 NDTKKKNNKKGNNNNGGNKSGNANNQGNEKGGKKSKGKKKGDKLDSILDEFKKEIGEIKIKKCEEKKEEKVEEIKYKIDF 160 DLDEIKKIKKSIVIKEHLVEEQDNKHIRLLKNWPQVENSIQTSPATIPIEMVYKNNNYPVGEILNYNNYVLSGQSLQEKK 240 ELEKLSIDYYQDLRKAAECHRQVRKYIQTYIKPGRKMIDIVQKTEQKTKELILSHKLKCGWGFPTGCSLNNCAAHYTPNY 320 GDETVLKEDDVCKLDFGVHVNGYIIDCAFTIAFNDKYDNLIKATQDGTNTGIKEAGIDARMCDIGEAIQEAIESYEIELN 400 QKVYPIKPISNLRGHSICKYVIHGGKCVPIVKQQEKHEIMEEGDLFAIETFASTGKGYVVHENDCSHYMRNRDVQYAPIR 480 LNSAKTLLKVINDKFDTLPFCNRWLDDLGQTRHFMSLKTLIDLNIVEPYPPLCDIKNSFTSQMEHTILLRPTCKEVLSRG 560 PDF 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1011100 3 ----MNK|RD 0.064 . PCHAS_1011100 4 ---MNKR|DG 0.166 . PCHAS_1011100 7 MNKRDGK|NK 0.170 . PCHAS_1011100 9 KRDGKNK|SG 0.131 . PCHAS_1011100 14 NKSGNQK|EK 0.082 . PCHAS_1011100 16 SGNQKEK|GG 0.077 . PCHAS_1011100 19 QKEKGGK|SE 0.086 . PCHAS_1011100 24 GKSEGSK|IS 0.071 . PCHAS_1011100 28 GSKISNK|TP 0.061 . PCHAS_1011100 34 KTPQNEK|TV 0.068 . PCHAS_1011100 37 QNEKTVK|EN 0.085 . PCHAS_1011100 41 TVKENEK|KE 0.064 . PCHAS_1011100 42 VKENEKK|ED 0.105 . PCHAS_1011100 51 NLIEEMK|IG 0.066 . PCHAS_1011100 61 EVNASEK|ND 0.063 . PCHAS_1011100 66 EKNDCTK|NE 0.073 . PCHAS_1011100 70 CTKNENK|EN 0.060 . PCHAS_1011100 73 NENKENK|TQ 0.072 . PCHAS_1011100 78 NKTQDNK|NN 0.055 . PCHAS_1011100 84 KNNNDTK|KK 0.067 . PCHAS_1011100 85 NNNDTKK|KN 0.139 . PCHAS_1011100 86 NNDTKKK|NN 0.113 . PCHAS_1011100 89 TKKKNNK|KG 0.066 . PCHAS_1011100 90 KKKNNKK|GN 0.118 . PCHAS_1011100 99 NNNGGNK|SG 0.076 . PCHAS_1011100 110 NNQGNEK|GG 0.062 . PCHAS_1011100 113 GNEKGGK|KS 0.062 . PCHAS_1011100 114 NEKGGKK|SK 0.171 . PCHAS_1011100 116 KGGKKSK|GK 0.077 . PCHAS_1011100 118 GKKSKGK|KK 0.115 . PCHAS_1011100 119 KKSKGKK|KG 0.124 . PCHAS_1011100 120 KSKGKKK|GD 0.089 . PCHAS_1011100 123 GKKKGDK|LD 0.064 . PCHAS_1011100 132 SILDEFK|KE 0.058 . PCHAS_1011100 133 ILDEFKK|EI 0.111 . PCHAS_1011100 139 KEIGEIK|IK 0.063 . PCHAS_1011100 141 IGEIKIK|KC 0.064 . PCHAS_1011100 142 GEIKIKK|CE 0.134 . PCHAS_1011100 146 IKKCEEK|KE 0.081 . PCHAS_1011100 147 KKCEEKK|EE 0.087 . PCHAS_1011100 150 EEKKEEK|VE 0.057 . PCHAS_1011100 155 EKVEEIK|YK 0.063 . PCHAS_1011100 157 VEEIKYK|ID 0.072 . PCHAS_1011100 166 FDLDEIK|KI 0.061 . PCHAS_1011100 167 DLDEIKK|IK 0.071 . PCHAS_1011100 169 DEIKKIK|KS 0.067 . PCHAS_1011100 170 EIKKIKK|SI 0.185 . PCHAS_1011100 175 KKSIVIK|EH 0.073 . PCHAS_1011100 185 VEEQDNK|HI 0.060 . PCHAS_1011100 188 QDNKHIR|LL 0.109 . PCHAS_1011100 191 KHIRLLK|NW 0.177 . PCHAS_1011100 214 PIEMVYK|NN 0.060 . PCHAS_1011100 239 GQSLQEK|KE 0.064 . PCHAS_1011100 240 QSLQEKK|EL 0.092 . PCHAS_1011100 244 EKKELEK|LS 0.059 . PCHAS_1011100 254 DYYQDLR|KA 0.074 . PCHAS_1011100 255 YYQDLRK|AA 0.094 . PCHAS_1011100 261 KAAECHR|QV 0.154 . PCHAS_1011100 264 ECHRQVR|KY 0.253 . PCHAS_1011100 265 CHRQVRK|YI 0.122 . PCHAS_1011100 272 YIQTYIK|PG 0.062 . PCHAS_1011100 275 TYIKPGR|KM 0.099 . PCHAS_1011100 276 YIKPGRK|MI 0.108 . PCHAS_1011100 283 MIDIVQK|TE 0.060 . PCHAS_1011100 287 VQKTEQK|TK 0.062 . PCHAS_1011100 289 KTEQKTK|EL 0.063 . PCHAS_1011100 296 ELILSHK|LK 0.061 . PCHAS_1011100 298 ILSHKLK|CG 0.083 . PCHAS_1011100 327 GDETVLK|ED 0.064 . PCHAS_1011100 333 KEDDVCK|LD 0.064 . PCHAS_1011100 356 TIAFNDK|YD 0.075 . PCHAS_1011100 362 KYDNLIK|AT 0.074 . PCHAS_1011100 373 GTNTGIK|EA 0.077 . PCHAS_1011100 380 EAGIDAR|MC 0.152 . PCHAS_1011100 402 EIELNQK|VY 0.053 . PCHAS_1011100 407 QKVYPIK|PI 0.082 . PCHAS_1011100 413 KPISNLR|GH 0.092 . PCHAS_1011100 419 RGHSICK|YV 0.108 . PCHAS_1011100 426 YVIHGGK|CV 0.074 . PCHAS_1011100 432 KCVPIVK|QQ 0.071 . PCHAS_1011100 436 IVKQQEK|HE 0.070 . PCHAS_1011100 456 TFASTGK|GY 0.070 . PCHAS_1011100 470 DCSHYMR|NR 0.110 . PCHAS_1011100 472 SHYMRNR|DV 0.158 . PCHAS_1011100 480 VQYAPIR|LN 0.089 . PCHAS_1011100 485 IRLNSAK|TL 0.085 . PCHAS_1011100 489 SAKTLLK|VI 0.071 . PCHAS_1011100 494 LKVINDK|FD 0.059 . PCHAS_1011100 503 TLPFCNR|WL 0.118 . PCHAS_1011100 512 DDLGQTR|HF 0.076 . PCHAS_1011100 518 RHFMSLK|TL 0.065 . PCHAS_1011100 536 PPLCDIK|NS 0.066 . PCHAS_1011100 550 EHTILLR|PT 0.078 . PCHAS_1011100 554 LLRPTCK|EV 0.077 . PCHAS_1011100 559 CKEVLSR|GP 0.093 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1011100 ATGAATAAACGAGACGGGAAAAATAAAAGTGGGAACCAGAAAGAAAAAGGTGGCAAATCT GAAGGATCAAAGATTTCCAATAAAACCCCACAAAATGAGAAAACTGTAAAAGAAAATGAA AAAAAAGAAGATAATCTTATAGAAGAAATGAAGATAGGAAATGAGGTGAATGCCAGTGAA AAAAATGATTGTACAAAAAATGAAAACAAAGAAAATAAAACTCAAGATAACAAAAATAAT AATGATACCAAAAAGAAAAACAACAAAAAAGGAAACAACAATAATGGGGGTAATAAAAGC GGAAATGCAAATAATCAAGGCAATGAAAAGGGAGGAAAAAAAAGTAAGGGGAAAAAAAAA GGGGATAAATTGGATTCAATACTTGACGAATTTAAGAAAGAAATTGGAGAAATCAAAATA AAAAAATGTGAAGAAAAAAAAGAGGAAAAGGTTGAAGAAATTAAATACAAAATTGATTTT GATCTAGATGAAATAAAAAAAATAAAAAAGAGTATAGTAATAAAAGAACATTTAGTAGAA GAACAAGATAATAAACATATACGATTATTAAAAAATTGGCCCCAAGTTGAGAACAGTATA CAAACAAGTCCAGCAACTATCCCTATTGAAATGGTTTACAAAAATAATAATTATCCAGTT GGCGAAATATTAAATTATAATAATTATGTATTAAGTGGGCAATCATTACAAGAAAAAAAA GAATTAGAAAAATTGAGTATTGATTATTATCAAGATTTAAGAAAAGCTGCTGAATGTCAT AGGCAAGTTAGAAAATATATTCAAACATATATTAAACCTGGAAGAAAAATGATAGATATA GTACAAAAAACAGAACAAAAAACAAAAGAATTAATTTTATCACATAAATTAAAATGTGGA TGGGGATTTCCAACAGGTTGCTCATTAAATAATTGTGCAGCACATTATACCCCCAATTAT GGTGATGAAACAGTGCTAAAAGAGGATGATGTATGTAAGTTAGATTTTGGAGTTCATGTG AATGGATATATAATTGATTGTGCATTTACAATAGCATTTAATGATAAATATGATAATCTT ATTAAAGCTACTCAAGATGGTACAAATACTGGTATTAAAGAAGCAGGTATAGATGCAAGA ATGTGCGATATTGGTGAAGCTATACAAGAAGCTATAGAATCATATGAAATTGAATTAAAT CAAAAAGTATATCCAATAAAACCTATATCAAATTTAAGAGGACATTCAATATGTAAATAT GTTATACATGGTGGTAAATGTGTGCCTATTGTTAAACAGCAAGAAAAACATGAAATTATG GAAGAAGGTGATTTATTTGCTATTGAAACATTTGCATCGACAGGAAAAGGTTATGTAGTA CATGAAAATGATTGTTCACATTATATGAGAAATCGGGATGTGCAATATGCACCTATAAGA TTAAATTCAGCAAAAACATTATTAAAAGTTATAAATGACAAATTTGATACTTTACCATTT TGCAATAGATGGTTAGATGATTTAGGCCAAACAAGGCATTTTATGTCATTAAAAACATTG ATAGATTTAAATATTGTAGAGCCATATCCCCCTCTTTGTGATATTAAAAATTCTTTCACC TCACAAATGGAGCATACTATTTTGTTGCGACCCACATGTAAGGAGGTTTTATCTCGTGGC CCAGATTTCTAA
  • Download Fasta

  • Fasta :-

    MNKRDGKNKSGNQKEKGGKSEGSKISNKTPQNEKTVKENEKKEDNLIEEMKIGNEVNASE KNDCTKNENKENKTQDNKNNNDTKKKNNKKGNNNNGGNKSGNANNQGNEKGGKKSKGKKK GDKLDSILDEFKKEIGEIKIKKCEEKKEEKVEEIKYKIDFDLDEIKKIKKSIVIKEHLVE EQDNKHIRLLKNWPQVENSIQTSPATIPIEMVYKNNNYPVGEILNYNNYVLSGQSLQEKK ELEKLSIDYYQDLRKAAECHRQVRKYIQTYIKPGRKMIDIVQKTEQKTKELILSHKLKCG WGFPTGCSLNNCAAHYTPNYGDETVLKEDDVCKLDFGVHVNGYIIDCAFTIAFNDKYDNL IKATQDGTNTGIKEAGIDARMCDIGEAIQEAIESYEIELNQKVYPIKPISNLRGHSICKY VIHGGKCVPIVKQQEKHEIMEEGDLFAIETFASTGKGYVVHENDCSHYMRNRDVQYAPIR LNSAKTLLKVINDKFDTLPFCNRWLDDLGQTRHFMSLKTLIDLNIVEPYPPLCDIKNSFT SQMEHTILLRPTCKEVLSRGPDF

  • title: active site
  • coordinates: H315,D335,D346,H415,E449,E544
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_1011100541 SNSFTSQMEH0.991unsp

PCHAS_101110      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India