PCHAS_1012100 | signal peptidase complex subunit SPC1, putative

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Fasta :-
>PCHAS_1012100 MGFIACIVNTFVCLARNQMDFQGQQLAFLIKNIIFTIATIASIGIGYHKQDLALGTYIIL AGSALSTILVVPTWPIYNRHPIKWEESPTSKQKKK
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MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1012100.fa Sequence name : PCHAS_1012100 Sequence length : 95 VALUES OF COMPUTED PARAMETERS Coef20 : 4.432 CoefTot : -3.387 ChDiff : 5 ZoneTo : 92 KR : 6 DE : 4 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.906 1.894 0.370 0.699 MesoH : 0.435 0.971 -0.088 0.418 MuHd_075 : 24.551 19.167 7.236 5.520 MuHd_095 : 32.380 24.776 8.849 7.498 MuHd_100 : 31.160 26.696 9.322 7.635 MuHd_105 : 28.732 23.524 8.607 7.961 Hmax_075 : 9.800 22.138 0.375 7.070 Hmax_095 : 20.825 25.550 -0.304 7.577 Hmax_100 : 18.600 28.100 4.099 6.680 Hmax_105 : 12.800 28.100 4.556 5.470 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9820 0.0180 DFMC : 0.9772 0.0228

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 95 PCHAS_1012100 MGFIACIVNTFVCLARNQMDFQGQQLAFLIKNIIFTIATIASIGIGYHKQDLALGTYIILAGSALSTILVVPTWPIYNRH 80 PIKWEESPTSKQKKK 160 ................................................................................ 80 ............... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1012100 16 TFVCLAR|NQ 0.109 . PCHAS_1012100 31 QLAFLIK|NI 0.070 . PCHAS_1012100 49 IGIGYHK|QD 0.060 . PCHAS_1012100 79 TWPIYNR|HP 0.105 . PCHAS_1012100 83 YNRHPIK|WE 0.066 . PCHAS_1012100 91 EESPTSK|QK 0.069 . PCHAS_1012100 93 SPTSKQK|KK 0.069 . PCHAS_1012100 94 PTSKQKK|K- 0.157 . PCHAS_1012100 95 TSKQKKK|-- 0.172 . ____________________________^_________________

Fasta :-
>PCHAS_1012100 ATGGGATTTATTGCATGTATCGTAAATACTTTCGTGTGTCTAGCGAGAAATCAAATGGAT TTCCAAGGTCAACAGCTAGCATTTTTAATTAAGAATATAATATTTACAATTGCTACAATC GCTTCAATTGGTATAGGCTATCATAAACAAGACTTAGCCTTAGGTACTTACATTATTTTA GCTGGATCTGCCTTATCAACCATACTGGTAGTCCCAACATGGCCGATATACAATAGGCAT CCAATTAAATGGGAAGAATCGCCAACATCAAAACAGAAAAAGAAATAA
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