PCHAS_1015300 | plasmepsin IX, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:  GO:0020008      

  • Curated_GO_Components:  rhoptry      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1015300OTHER0.9715640.0251030.003333
No Results

  • Fasta :-

    >PCHAS_1015300 MFFLNFKKLRKNYFLALLTHPTITVLFFIYIFNFVTSDYAHLNKKSNNLPSLKNDQEYNK QNIQPCNSCVNCSVCIHENAEPQDILPLVAVPSRRKYFYEQDRSKDDDLNDFPVEDKINE NDERTEYDNDYSQNELSKKKKKMYNFIENHNEMPDMDNDVTDEEYEENMEEENMEEENTT NLESNYENTFNSEKEDSTDSKVILPLQQLKDSQYVGFIQIGNPPQTIRPIFDTGSTNIWI VSTKCKDKTCLKVHRYNHKLSDTFKYYTPRTNLDIMFGTGIIQGTIGIETFKIGPFKIEN QSFGLVKREKGTDDKSNVFERINFEGIVGLAFPAMLSTGGNPIYENLMSSYNFPHNEFSI YIGMDNKYSALIFGGVEKKFFEGDIYMFPVVREYYWEIKFDGLYIDHQKFCCDSGSIVYD LKMKDENKHKKKYSMRKYFHKHHFNHKKIWLRKNHHTKRWKREKHFKPLNSDENYLIFDS GTSFNSVPKSEIKYFFKVVPPKECNDDNIDEVIDSYPNLTYVINNMPFTLTPSQYLIRKR NMCKPAFMEIEVSPEYGHAYILGNAAFMKHYYTVYRRGKGNNDSYVGIAKAVHTKENAEY LNSLHKERMEDEE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1015300.fa Sequence name : PCHAS_1015300 Sequence length : 613 VALUES OF COMPUTED PARAMETERS Coef20 : 4.340 CoefTot : -1.458 ChDiff : -11 ZoneTo : 54 KR : 7 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.924 1.888 0.234 0.744 MesoH : -0.383 0.183 -0.400 0.290 MuHd_075 : 25.856 17.709 7.615 5.594 MuHd_095 : 21.632 19.502 8.326 6.009 MuHd_100 : 23.122 20.075 8.601 5.926 MuHd_105 : 23.315 19.038 7.862 5.585 Hmax_075 : 1.633 12.200 2.092 4.960 Hmax_095 : 10.400 9.700 -0.066 3.980 Hmax_100 : 7.300 9.700 0.249 4.100 Hmax_105 : 4.500 5.500 -0.609 2.550 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8012 0.1988 DFMC : 0.6042 0.3958
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 613 PCHAS_1015300 MFFLNFKKLRKNYFLALLTHPTITVLFFIYIFNFVTSDYAHLNKKSNNLPSLKNDQEYNKQNIQPCNSCVNCSVCIHENA 80 EPQDILPLVAVPSRRKYFYEQDRSKDDDLNDFPVEDKINENDERTEYDNDYSQNELSKKKKKMYNFIENHNEMPDMDNDV 160 TDEEYEENMEEENMEEENTTNLESNYENTFNSEKEDSTDSKVILPLQQLKDSQYVGFIQIGNPPQTIRPIFDTGSTNIWI 240 VSTKCKDKTCLKVHRYNHKLSDTFKYYTPRTNLDIMFGTGIIQGTIGIETFKIGPFKIENQSFGLVKREKGTDDKSNVFE 320 RINFEGIVGLAFPAMLSTGGNPIYENLMSSYNFPHNEFSIYIGMDNKYSALIFGGVEKKFFEGDIYMFPVVREYYWEIKF 400 DGLYIDHQKFCCDSGSIVYDLKMKDENKHKKKYSMRKYFHKHHFNHKKIWLRKNHHTKRWKREKHFKPLNSDENYLIFDS 480 GTSFNSVPKSEIKYFFKVVPPKECNDDNIDEVIDSYPNLTYVINNMPFTLTPSQYLIRKRNMCKPAFMEIEVSPEYGHAY 560 ILGNAAFMKHYYTVYRRGKGNNDSYVGIAKAVHTKENAEYLNSLHKERMEDEE 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .............................................................P.................. 480 ................................................................................ 560 ..................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1015300 7 MFFLNFK|KL 0.058 . PCHAS_1015300 8 FFLNFKK|LR 0.071 . PCHAS_1015300 10 LNFKKLR|KN 0.081 . PCHAS_1015300 11 NFKKLRK|NY 0.082 . PCHAS_1015300 44 DYAHLNK|KS 0.057 . PCHAS_1015300 45 YAHLNKK|SN 0.089 . PCHAS_1015300 53 NNLPSLK|ND 0.058 . PCHAS_1015300 60 NDQEYNK|QN 0.061 . PCHAS_1015300 94 LVAVPSR|RK 0.084 . PCHAS_1015300 95 VAVPSRR|KY 0.147 . PCHAS_1015300 96 AVPSRRK|YF 0.078 . PCHAS_1015300 103 YFYEQDR|SK 0.150 . PCHAS_1015300 105 YEQDRSK|DD 0.065 . PCHAS_1015300 117 DFPVEDK|IN 0.064 . PCHAS_1015300 124 INENDER|TE 0.080 . PCHAS_1015300 138 SQNELSK|KK 0.065 . PCHAS_1015300 139 QNELSKK|KK 0.092 . PCHAS_1015300 140 NELSKKK|KK 0.082 . PCHAS_1015300 141 ELSKKKK|KM 0.134 . PCHAS_1015300 142 LSKKKKK|MY 0.171 . PCHAS_1015300 194 NTFNSEK|ED 0.059 . PCHAS_1015300 201 EDSTDSK|VI 0.068 . PCHAS_1015300 210 LPLQQLK|DS 0.071 . PCHAS_1015300 228 NPPQTIR|PI 0.122 . PCHAS_1015300 244 IWIVSTK|CK 0.067 . PCHAS_1015300 246 IVSTKCK|DK 0.082 . PCHAS_1015300 248 STKCKDK|TC 0.062 . PCHAS_1015300 252 KDKTCLK|VH 0.053 . PCHAS_1015300 255 TCLKVHR|YN 0.123 . PCHAS_1015300 259 VHRYNHK|LS 0.067 . PCHAS_1015300 265 KLSDTFK|YY 0.079 . PCHAS_1015300 270 FKYYTPR|TN 0.101 . PCHAS_1015300 292 IGIETFK|IG 0.057 . PCHAS_1015300 297 FKIGPFK|IE 0.068 . PCHAS_1015300 307 QSFGLVK|RE 0.058 . PCHAS_1015300 308 SFGLVKR|EK 0.210 . PCHAS_1015300 310 GLVKREK|GT 0.084 . PCHAS_1015300 315 EKGTDDK|SN 0.070 . PCHAS_1015300 321 KSNVFER|IN 0.151 . PCHAS_1015300 367 YIGMDNK|YS 0.064 . PCHAS_1015300 378 IFGGVEK|KF 0.065 . PCHAS_1015300 379 FGGVEKK|FF 0.128 . PCHAS_1015300 392 YMFPVVR|EY 0.081 . PCHAS_1015300 399 EYYWEIK|FD 0.072 . PCHAS_1015300 409 LYIDHQK|FC 0.073 . PCHAS_1015300 422 SIVYDLK|MK 0.062 . PCHAS_1015300 424 VYDLKMK|DE 0.065 . PCHAS_1015300 428 KMKDENK|HK 0.060 . PCHAS_1015300 430 KDENKHK|KK 0.067 . PCHAS_1015300 431 DENKHKK|KY 0.116 . PCHAS_1015300 432 ENKHKKK|YS 0.204 . PCHAS_1015300 436 KKKYSMR|KY 0.116 . PCHAS_1015300 437 KKYSMRK|YF 0.123 . PCHAS_1015300 441 MRKYFHK|HH 0.079 . PCHAS_1015300 447 KHHFNHK|KI 0.067 . PCHAS_1015300 448 HHFNHKK|IW 0.143 . PCHAS_1015300 452 HKKIWLR|KN 0.091 . PCHAS_1015300 453 KKIWLRK|NH 0.094 . PCHAS_1015300 458 RKNHHTK|RW 0.080 . PCHAS_1015300 459 KNHHTKR|WK 0.283 . PCHAS_1015300 461 HHTKRWK|RE 0.056 . PCHAS_1015300 462 HTKRWKR|EK 0.572 *ProP* PCHAS_1015300 464 KRWKREK|HF 0.077 . PCHAS_1015300 467 KREKHFK|PL 0.087 . PCHAS_1015300 489 SFNSVPK|SE 0.090 . PCHAS_1015300 493 VPKSEIK|YF 0.075 . PCHAS_1015300 497 EIKYFFK|VV 0.079 . PCHAS_1015300 502 FKVVPPK|EC 0.066 . PCHAS_1015300 538 PSQYLIR|KR 0.083 . PCHAS_1015300 539 SQYLIRK|RN 0.075 . PCHAS_1015300 540 QYLIRKR|NM 0.152 . PCHAS_1015300 544 RKRNMCK|PA 0.084 . PCHAS_1015300 569 GNAAFMK|HY 0.084 . PCHAS_1015300 576 HYYTVYR|RG 0.079 . PCHAS_1015300 577 YYTVYRR|GK 0.138 . PCHAS_1015300 579 TVYRRGK|GN 0.176 . PCHAS_1015300 590 SYVGIAK|AV 0.113 . PCHAS_1015300 595 AKAVHTK|EN 0.077 . PCHAS_1015300 606 YLNSLHK|ER 0.061 . PCHAS_1015300 608 NSLHKER|ME 0.102 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1015300 ATGTTTTTTTTAAATTTTAAAAAATTAAGAAAAAATTATTTCTTGGCACTTTTAACACAC CCAACAATAACAGTATTATTTTTTATTTATATTTTTAATTTTGTTACAAGTGATTATGCA CATTTGAATAAAAAATCAAATAATTTACCTTCTTTAAAAAACGATCAAGAATATAATAAA CAAAATATACAGCCATGTAACTCTTGTGTAAATTGTTCTGTCTGCATTCATGAAAATGCG GAACCACAGGACATTCTCCCCTTAGTAGCGGTACCAAGTAGAAGGAAATATTTTTATGAA CAAGACAGGTCAAAAGACGACGATTTAAACGATTTTCCAGTAGAAGATAAAATAAATGAA AATGACGAACGCACAGAGTATGATAACGATTATTCTCAAAACGAATTAAGTAAAAAAAAA AAAAAAATGTATAATTTTATTGAAAATCATAATGAAATGCCAGATATGGATAATGATGTT ACGGATGAAGAATATGAAGAAAATATGGAGGAAGAAAATATGGAGGAAGAAAATACTACC AATTTAGAATCAAATTATGAAAATACATTTAATTCGGAAAAGGAAGACTCAACAGATAGC AAAGTCATTTTACCTCTACAACAGTTGAAAGATAGCCAATATGTTGGTTTTATACAAATA GGAAACCCTCCCCAAACAATCAGACCAATTTTCGATACTGGGAGCACGAATATATGGATT GTTAGCACTAAATGCAAAGACAAAACATGCCTAAAAGTACATCGTTATAACCACAAATTA TCCGATACCTTTAAATATTACACCCCACGAACCAATTTAGATATTATGTTTGGAACCGGA ATAATTCAGGGAACAATTGGGATCGAGACATTCAAAATTGGTCCATTTAAAATTGAAAAT CAATCCTTTGGATTAGTAAAACGTGAAAAAGGAACTGATGATAAATCAAATGTTTTCGAA CGAATTAATTTTGAAGGTATTGTAGGATTAGCATTTCCTGCAATGCTTTCTACTGGTGGA AATCCAATATATGAAAATTTAATGTCTAGTTATAATTTTCCACATAATGAATTTTCAATA TATATTGGAATGGATAATAAATATTCAGCTTTAATTTTTGGAGGAGTTGAAAAAAAATTT TTTGAAGGAGATATATATATGTTTCCAGTTGTAAGAGAATATTATTGGGAAATAAAATTT GATGGATTATATATAGATCATCAAAAATTTTGTTGTGATAGTGGTTCAATTGTTTATGAT TTAAAAATGAAAGATGAAAATAAACACAAAAAAAAATATTCCATGCGAAAATATTTTCAC AAACATCATTTTAATCATAAAAAAATATGGCTACGAAAGAATCATCATACTAAACGTTGG AAAAGAGAAAAACATTTCAAGCCCTTGAATTCCGATGAAAATTATTTAATATTCGACTCT GGAACTTCATTTAATAGTGTCCCTAAGTCGGAAATCAAATACTTTTTTAAAGTTGTCCCT CCCAAGGAATGTAACGATGATAATATTGACGAAGTTATAGATAGTTACCCCAACTTAACC TATGTTATCAATAACATGCCCTTTACATTGACACCATCCCAATATTTGATTCGAAAACGC AATATGTGTAAACCCGCATTTATGGAAATTGAAGTTTCTCCAGAATATGGACATGCATAC ATTTTAGGAAATGCAGCATTCATGAAACATTATTATACTGTCTACAGACGAGGAAAGGGC AATAATGATTCATATGTTGGAATAGCTAAAGCTGTGCATACAAAGGAAAACGCAGAATAT TTAAATTCGCTACACAAGGAAAGGATGGAAGACGAAGAATAG
  • Download Fasta

  • Fasta :-

    MFFLNFKKLRKNYFLALLTHPTITVLFFIYIFNFVTSDYAHLNKKSNNLPSLKNDQEYNK QNIQPCNSCVNCSVCIHENAEPQDILPLVAVPSRRKYFYEQDRSKDDDLNDFPVEDKINE NDERTEYDNDYSQNELSKKKKKMYNFIENHNEMPDMDNDVTDEEYEENMEEENMEEENTT NLESNYENTFNSEKEDSTDSKVILPLQQLKDSQYVGFIQIGNPPQTIRPIFDTGSTNIWI VSTKCKDKTCLKVHRYNHKLSDTFKYYTPRTNLDIMFGTGIIQGTIGIETFKIGPFKIEN QSFGLVKREKGTDDKSNVFERINFEGIVGLAFPAMLSTGGNPIYENLMSSYNFPHNEFSI YIGMDNKYSALIFGGVEKKFFEGDIYMFPVVREYYWEIKFDGLYIDHQKFCCDSGSIVYD LKMKDENKHKKKYSMRKYFHKHHFNHKKIWLRKNHHTKRWKREKHFKPLNSDENYLIFDS GTSFNSVPKSEIKYFFKVVPPKECNDDNIDEVIDSYPNLTYVINNMPFTLTPSQYLIRKR NMCKPAFMEIEVSPEYGHAYILGNAAFMKHYYTVYRRGKGNNDSYVGIAKAVHTKENAEY LNSLHKERMEDEE

  • title: catalytic residue
  • coordinates: D232,D479
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_1015300192 SNTFNSEKED0.994unsp

PCHAS_101530      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India