PCHAS_1041700 | lysophospholipase, putative

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1041700OTHER0.9998560.0000230.000121
No Results

  • Fasta :-

    >PCHAS_1041700 MEEIELNNDELRSTTISKLDGDPKIGWLCNKKGLLLKTYRWLVNNPIGIVLLIHGFRAHT RLTFMKINLQMSNNNEDIIVDTDNYYIYKDSWIEKLNQNGYSVYALDLQGHGESQAWKNI RGDFSSFDDLVDDVIQYMNQIHDEISNDNQMNDESHNILTSKKQKLPMYVIGYSMGGNIA LRMLQVLNKEKQSKIKSRNSNNYKKSKKNLCNSNNINETGNDMYDMNNSSDYGSYKSGPR TSTMTSASSSDKHLGYYNLDKFNIKGCVSLSSMLKLNETRNAGNNSIKYLYLPAAGFLSL VAPNVILPSNPYYKNFEYINYTYKYDKFRNSSGTKFKYVYELLKATVTVNCNINYMPKDI PVLFVHSTDDTVCCFEGTVSFHSKAKIENKDIHIVENMDHAVTEAPGNEDVLKKVIDWIS DLRMNDQDEKENEIKHEIEDKKENEI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1041700.fa Sequence name : PCHAS_1041700 Sequence length : 446 VALUES OF COMPUTED PARAMETERS Coef20 : 3.554 CoefTot : 0.000 ChDiff : -6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.594 0.170 0.652 MesoH : -0.651 0.011 -0.447 0.153 MuHd_075 : 25.067 17.635 6.817 5.918 MuHd_095 : 11.951 9.562 4.090 1.667 MuHd_100 : 11.194 5.137 1.515 0.805 MuHd_105 : 21.074 5.859 4.051 2.856 Hmax_075 : -7.233 2.100 -4.182 1.528 Hmax_095 : -3.500 6.000 -2.119 1.210 Hmax_100 : -7.900 -1.300 -5.184 0.030 Hmax_105 : -2.500 1.300 -3.456 0.770 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9193 0.0807 DFMC : 0.9502 0.0498
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 446 PCHAS_1041700 MEEIELNNDELRSTTISKLDGDPKIGWLCNKKGLLLKTYRWLVNNPIGIVLLIHGFRAHTRLTFMKINLQMSNNNEDIIV 80 DTDNYYIYKDSWIEKLNQNGYSVYALDLQGHGESQAWKNIRGDFSSFDDLVDDVIQYMNQIHDEISNDNQMNDESHNILT 160 SKKQKLPMYVIGYSMGGNIALRMLQVLNKEKQSKIKSRNSNNYKKSKKNLCNSNNINETGNDMYDMNNSSDYGSYKSGPR 240 TSTMTSASSSDKHLGYYNLDKFNIKGCVSLSSMLKLNETRNAGNNSIKYLYLPAAGFLSLVAPNVILPSNPYYKNFEYIN 320 YTYKYDKFRNSSGTKFKYVYELLKATVTVNCNINYMPKDIPVLFVHSTDDTVCCFEGTVSFHSKAKIENKDIHIVENMDH 400 AVTEAPGNEDVLKKVIDWISDLRMNDQDEKENEIKHEIEDKKENEI 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .............................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1041700 12 LNNDELR|ST 0.145 . PCHAS_1041700 18 RSTTISK|LD 0.063 . PCHAS_1041700 24 KLDGDPK|IG 0.057 . PCHAS_1041700 31 IGWLCNK|KG 0.052 . PCHAS_1041700 32 GWLCNKK|GL 0.076 . PCHAS_1041700 37 KKGLLLK|TY 0.061 . PCHAS_1041700 40 LLLKTYR|WL 0.080 . PCHAS_1041700 57 LLIHGFR|AH 0.085 . PCHAS_1041700 61 GFRAHTR|LT 0.119 . PCHAS_1041700 66 TRLTFMK|IN 0.069 . PCHAS_1041700 89 DNYYIYK|DS 0.071 . PCHAS_1041700 95 KDSWIEK|LN 0.068 . PCHAS_1041700 118 GESQAWK|NI 0.082 . PCHAS_1041700 121 QAWKNIR|GD 0.115 . PCHAS_1041700 162 HNILTSK|KQ 0.057 . PCHAS_1041700 163 NILTSKK|QK 0.086 . PCHAS_1041700 165 LTSKKQK|LP 0.075 . PCHAS_1041700 182 GGNIALR|ML 0.086 . PCHAS_1041700 189 MLQVLNK|EK 0.065 . PCHAS_1041700 191 QVLNKEK|QS 0.059 . PCHAS_1041700 194 NKEKQSK|IK 0.068 . PCHAS_1041700 196 EKQSKIK|SR 0.077 . PCHAS_1041700 198 QSKIKSR|NS 0.124 . PCHAS_1041700 204 RNSNNYK|KS 0.078 . PCHAS_1041700 205 NSNNYKK|SK 0.146 . PCHAS_1041700 207 NNYKKSK|KN 0.062 . PCHAS_1041700 208 NYKKSKK|NL 0.107 . PCHAS_1041700 236 SDYGSYK|SG 0.077 . PCHAS_1041700 240 SYKSGPR|TS 0.069 . PCHAS_1041700 252 SASSSDK|HL 0.088 . PCHAS_1041700 261 GYYNLDK|FN 0.075 . PCHAS_1041700 265 LDKFNIK|GC 0.060 . PCHAS_1041700 275 SLSSMLK|LN 0.066 . PCHAS_1041700 280 LKLNETR|NA 0.089 . PCHAS_1041700 288 AGNNSIK|YL 0.072 . PCHAS_1041700 314 PSNPYYK|NF 0.075 . PCHAS_1041700 324 YINYTYK|YD 0.061 . PCHAS_1041700 327 YTYKYDK|FR 0.064 . PCHAS_1041700 329 YKYDKFR|NS 0.103 . PCHAS_1041700 335 RNSSGTK|FK 0.074 . PCHAS_1041700 337 SSGTKFK|YV 0.128 . PCHAS_1041700 344 YVYELLK|AT 0.062 . PCHAS_1041700 358 NINYMPK|DI 0.080 . PCHAS_1041700 384 TVSFHSK|AK 0.090 . PCHAS_1041700 386 SFHSKAK|IE 0.075 . PCHAS_1041700 390 KAKIENK|DI 0.122 . PCHAS_1041700 413 GNEDVLK|KV 0.092 . PCHAS_1041700 414 NEDVLKK|VI 0.103 . PCHAS_1041700 423 DWISDLR|MN 0.085 . PCHAS_1041700 430 MNDQDEK|EN 0.061 . PCHAS_1041700 435 EKENEIK|HE 0.061 . PCHAS_1041700 441 KHEIEDK|KE 0.064 . PCHAS_1041700 442 HEIEDKK|EN 0.109 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1041700 ATGGAGGAAATTGAATTGAATAATGATGAATTAAGAAGTACTACAATAAGTAAATTAGAT GGTGATCCTAAGATAGGTTGGCTATGTAATAAAAAGGGTTTACTTTTAAAAACATATAGA TGGCTAGTTAATAATCCTATAGGAATTGTATTGTTAATACATGGATTTAGAGCTCATACT CGATTAACATTTATGAAAATCAATTTACAAATGTCAAATAACAATGAAGACATAATAGTA GACACTGATAATTATTATATTTATAAAGATAGTTGGATTGAAAAACTTAATCAAAATGGT TATTCAGTATATGCCCTAGATTTGCAAGGACATGGTGAATCACAAGCATGGAAAAATATA AGAGGCGACTTTAGTTCTTTTGATGATTTAGTTGATGATGTAATACAATATATGAATCAA ATTCACGATGAAATCTCAAATGATAATCAAATGAATGATGAATCTCATAATATATTGACA AGTAAAAAACAAAAACTTCCTATGTATGTTATTGGATATTCGATGGGAGGAAATATTGCT TTAAGAATGTTACAAGTATTAAATAAAGAAAAACAAAGTAAAATTAAGTCTAGGAATTCA AATAACTATAAAAAATCCAAAAAAAACTTATGCAACTCTAATAATATTAATGAAACTGGT AATGATATGTATGATATGAATAATTCTAGTGATTATGGTTCATATAAATCCGGTCCTCGT ACTTCTACTATGACAAGTGCTAGTTCTAGTGACAAACATCTAGGATACTATAATTTAGAT AAATTCAATATTAAAGGTTGTGTATCTTTATCTAGTATGCTTAAATTAAATGAAACACGA AATGCTGGAAATAATTCAATTAAGTATTTGTATTTACCTGCAGCAGGATTCCTGTCCCTT GTTGCGCCTAATGTAATACTTCCGTCAAACCCATATTATAAAAATTTCGAATATATTAAT TATACATATAAATATGATAAATTTAGAAATTCTAGTGGAACAAAATTTAAATATGTATAT GAACTTCTAAAAGCAACGGTCACAGTGAATTGTAATATTAATTATATGCCAAAAGATATT CCTGTATTATTTGTGCATTCAACAGATGATACTGTTTGTTGTTTTGAAGGGACGGTTTCA TTTCATAGTAAAGCAAAAATTGAAAATAAAGATATACATATTGTTGAGAATATGGATCAT GCTGTAACGGAAGCGCCAGGAAACGAAGATGTTTTAAAAAAAGTTATCGATTGGATTTCT GATTTAAGAATGAATGACCAAGATGAAAAAGAAAATGAAATAAAACATGAAATAGAAGAC AAAAAAGAAAATGAAATATAA
  • Download Fasta

  • Fasta :-

    MEEIELNNDELRSTTISKLDGDPKIGWLCNKKGLLLKTYRWLVNNPIGIVLLIHGFRAHT RLTFMKINLQMSNNNEDIIVDTDNYYIYKDSWIEKLNQNGYSVYALDLQGHGESQAWKNI RGDFSSFDDLVDDVIQYMNQIHDEISNDNQMNDESHNILTSKKQKLPMYVIGYSMGGNIA LRMLQVLNKEKQSKIKSRNSNNYKKSKKNLCNSNNINETGNDMYDMNNSSDYGSYKSGPR TSTMTSASSSDKHLGYYNLDKFNIKGCVSLSSMLKLNETRNAGNNSIKYLYLPAAGFLSL VAPNVILPSNPYYKNFEYINYTYKYDKFRNSSGTKFKYVYELLKATVTVNCNINYMPKDI PVLFVHSTDDTVCCFEGTVSFHSKAKIENKDIHIVENMDHAVTEAPGNEDVLKKVIDWIS DLRMNDQDEKENEIKHEIEDKKENEI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1041700248 SMTSASSSDK0.993unspPCHAS_1041700248 SMTSASSSDK0.993unspPCHAS_1041700248 SMTSASSSDK0.993unspPCHAS_1041700250 SSASSSDKHL0.991unspPCHAS_1041700367 SLFVHSTDDT0.99unspPCHAS_104170017 SSTTISKLDG0.994unspPCHAS_1041700234 SSDYGSYKSG0.996unsp

PCHAS_104170      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India