PCHAS_1130900 | metacaspase-1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:  GO:0008233      

  • Curated_GO_Functions:  peptidase activity      

  • Curated_GO_Processes:  apoptotic process      proteolysis      

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1130900OTHER0.9998780.0000450.000078
No Results

  • Fasta :-

    >PCHAS_1130900 MSFEMAQIYVKVHELKFVNNSERNSHYVKIYWDDKKYKSQTKDGGHYIFNETFLIPITNI NYQNDQIIYVEVWESNLLNKQCAYTIFTLNNIKTGQIIKENIALIEVLKKCTLELSINIV RNQKDILFFNIKESLPTYQDQQIRNAIWENEDEASIIKQLININKFNGITNLGDYKNSQI YNEIFKKPKENNYVYKSGEGMQNSYDPISTPEYTSHYIYKGADQNSSNYINKTNDILFPN HFNKSTYNDNIKNIYDTPNDTHYNNSSTYSNFDHNSMYSTKNNVPFSNPNDDKIFQYQQH FQYSRNYIPSPNSEKILYFSCGNKKKALLIGINYCGTSNELNGCINDATITKDLLIKKYN FYDSSMNILKLVDNQTNPNYRPTKRNILLALEWLVKDNNPGDIFFFFYSGHSYKKYDYAC IEKDGYNQTIVPCDFKTEGEIIDNDLHKYLIQPLKDGTKLVSYIDCPNSDGILNLGYKYK LKKEKWKETYNPFHVVSDITQLSYSKFKDFSTEMNLLEHVLITNNIETLTYYHVLQSIHS YINMYNKKKKNKIILMSSQKFGIDRKFDFDHILKNSNSDLGQHKKIIKWKKNKKNSSKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1130900.fa Sequence name : PCHAS_1130900 Sequence length : 599 VALUES OF COMPUTED PARAMETERS Coef20 : 3.716 CoefTot : 0.112 ChDiff : 10 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.312 1.165 -0.044 0.449 MesoH : -0.885 0.266 -0.498 0.210 MuHd_075 : 3.459 1.580 1.108 2.586 MuHd_095 : 15.079 1.491 2.475 1.834 MuHd_100 : 13.086 4.454 2.508 0.706 MuHd_105 : 16.499 10.733 5.059 2.054 Hmax_075 : 8.600 11.800 -0.652 4.860 Hmax_095 : 10.150 8.900 -0.881 3.413 Hmax_100 : 8.500 11.200 -0.795 3.800 Hmax_105 : 15.200 14.200 2.082 4.960 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9351 0.0649 DFMC : 0.9654 0.0346
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 599 PCHAS_1130900 MSFEMAQIYVKVHELKFVNNSERNSHYVKIYWDDKKYKSQTKDGGHYIFNETFLIPITNINYQNDQIIYVEVWESNLLNK 80 QCAYTIFTLNNIKTGQIIKENIALIEVLKKCTLELSINIVRNQKDILFFNIKESLPTYQDQQIRNAIWENEDEASIIKQL 160 ININKFNGITNLGDYKNSQIYNEIFKKPKENNYVYKSGEGMQNSYDPISTPEYTSHYIYKGADQNSSNYINKTNDILFPN 240 HFNKSTYNDNIKNIYDTPNDTHYNNSSTYSNFDHNSMYSTKNNVPFSNPNDDKIFQYQQHFQYSRNYIPSPNSEKILYFS 320 CGNKKKALLIGINYCGTSNELNGCINDATITKDLLIKKYNFYDSSMNILKLVDNQTNPNYRPTKRNILLALEWLVKDNNP 400 GDIFFFFYSGHSYKKYDYACIEKDGYNQTIVPCDFKTEGEIIDNDLHKYLIQPLKDGTKLVSYIDCPNSDGILNLGYKYK 480 LKKEKWKETYNPFHVVSDITQLSYSKFKDFSTEMNLLEHVLITNNIETLTYYHVLQSIHSYINMYNKKKKNKIILMSSQK 560 FGIDRKFDFDHILKNSNSDLGQHKKIIKWKKNKKNSSKN 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ....................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1130900 11 MAQIYVK|VH 0.057 . PCHAS_1130900 16 VKVHELK|FV 0.104 . PCHAS_1130900 23 FVNNSER|NS 0.092 . PCHAS_1130900 29 RNSHYVK|IY 0.073 . PCHAS_1130900 35 KIYWDDK|KY 0.059 . PCHAS_1130900 36 IYWDDKK|YK 0.126 . PCHAS_1130900 38 WDDKKYK|SQ 0.098 . PCHAS_1130900 42 KYKSQTK|DG 0.086 . PCHAS_1130900 80 ESNLLNK|QC 0.070 . PCHAS_1130900 93 FTLNNIK|TG 0.055 . PCHAS_1130900 99 KTGQIIK|EN 0.061 . PCHAS_1130900 109 ALIEVLK|KC 0.059 . PCHAS_1130900 110 LIEVLKK|CT 0.078 . PCHAS_1130900 121 LSINIVR|NQ 0.084 . PCHAS_1130900 124 NIVRNQK|DI 0.100 . PCHAS_1130900 132 ILFFNIK|ES 0.057 . PCHAS_1130900 144 YQDQQIR|NA 0.102 . PCHAS_1130900 158 DEASIIK|QL 0.061 . PCHAS_1130900 165 QLININK|FN 0.075 . PCHAS_1130900 176 TNLGDYK|NS 0.060 . PCHAS_1130900 186 IYNEIFK|KP 0.056 . PCHAS_1130900 187 YNEIFKK|PK 0.101 . PCHAS_1130900 189 EIFKKPK|EN 0.070 . PCHAS_1130900 196 ENNYVYK|SG 0.140 . PCHAS_1130900 220 TSHYIYK|GA 0.118 . PCHAS_1130900 232 SSNYINK|TN 0.079 . PCHAS_1130900 244 FPNHFNK|ST 0.094 . PCHAS_1130900 252 TYNDNIK|NI 0.073 . PCHAS_1130900 281 NSMYSTK|NN 0.061 . PCHAS_1130900 293 SNPNDDK|IF 0.068 . PCHAS_1130900 305 QHFQYSR|NY 0.090 . PCHAS_1130900 315 PSPNSEK|IL 0.059 . PCHAS_1130900 324 YFSCGNK|KK 0.056 . PCHAS_1130900 325 FSCGNKK|KA 0.089 . PCHAS_1130900 326 SCGNKKK|AL 0.140 . PCHAS_1130900 352 NDATITK|DL 0.067 . PCHAS_1130900 357 TKDLLIK|KY 0.061 . PCHAS_1130900 358 KDLLIKK|YN 0.082 . PCHAS_1130900 370 SSMNILK|LV 0.080 . PCHAS_1130900 381 QTNPNYR|PT 0.091 . PCHAS_1130900 384 PNYRPTK|RN 0.092 . PCHAS_1130900 385 NYRPTKR|NI 0.186 . PCHAS_1130900 396 ALEWLVK|DN 0.069 . PCHAS_1130900 414 YSGHSYK|KY 0.071 . PCHAS_1130900 415 SGHSYKK|YD 0.107 . PCHAS_1130900 423 DYACIEK|DG 0.062 . PCHAS_1130900 436 IVPCDFK|TE 0.062 . PCHAS_1130900 448 IDNDLHK|YL 0.088 . PCHAS_1130900 455 YLIQPLK|DG 0.066 . PCHAS_1130900 459 PLKDGTK|LV 0.066 . PCHAS_1130900 478 ILNLGYK|YK 0.073 . PCHAS_1130900 480 NLGYKYK|LK 0.069 . PCHAS_1130900 482 GYKYKLK|KE 0.063 . PCHAS_1130900 483 YKYKLKK|EK 0.105 . PCHAS_1130900 485 YKLKKEK|WK 0.080 . PCHAS_1130900 487 LKKEKWK|ET 0.078 . PCHAS_1130900 506 TQLSYSK|FK 0.061 . PCHAS_1130900 508 LSYSKFK|DF 0.100 . PCHAS_1130900 547 YINMYNK|KK 0.061 . PCHAS_1130900 548 INMYNKK|KK 0.124 . PCHAS_1130900 549 NMYNKKK|KN 0.122 . PCHAS_1130900 550 MYNKKKK|NK 0.136 . PCHAS_1130900 552 NKKKKNK|II 0.069 . PCHAS_1130900 560 ILMSSQK|FG 0.066 . PCHAS_1130900 565 QKFGIDR|KF 0.076 . PCHAS_1130900 566 KFGIDRK|FD 0.082 . PCHAS_1130900 574 DFDHILK|NS 0.057 . PCHAS_1130900 584 SDLGQHK|KI 0.067 . PCHAS_1130900 585 DLGQHKK|II 0.107 . PCHAS_1130900 588 QHKKIIK|WK 0.063 . PCHAS_1130900 590 KKIIKWK|KN 0.067 . PCHAS_1130900 591 KIIKWKK|NK 0.098 . PCHAS_1130900 593 IKWKKNK|KN 0.074 . PCHAS_1130900 594 KWKKNKK|NS 0.127 . PCHAS_1130900 598 NKKNSSK|N- 0.070 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1130900 ATGTCTTTTGAAATGGCCCAAATTTATGTTAAAGTACATGAATTGAAATTTGTAAACAAT TCAGAAAGAAACTCACATTATGTAAAAATATACTGGGATGATAAAAAATATAAAAGCCAA ACAAAAGATGGGGGGCATTATATATTTAATGAAACCTTTTTAATACCAATTACAAATATA AATTATCAAAATGATCAAATTATTTATGTAGAAGTATGGGAGAGTAACTTATTAAATAAA CAATGTGCCTATACAATTTTCACATTAAATAATATAAAAACAGGGCAAATAATAAAAGAA AATATAGCTTTAATTGAGGTTTTAAAAAAATGTACCTTAGAATTATCAATTAATATAGTT AGAAATCAAAAAGACATATTATTTTTTAATATTAAAGAATCATTACCCACATATCAAGAC CAACAAATAAGAAATGCCATCTGGGAAAATGAAGATGAGGCATCAATCATAAAACAATTA ATTAATATAAATAAATTTAATGGAATTACAAATTTAGGAGACTATAAAAATAGTCAGATT TATAATGAAATATTTAAAAAGCCAAAGGAAAATAATTATGTATATAAAAGTGGCGAAGGA ATGCAAAACAGTTATGACCCCATCTCGACACCAGAATATACAAGTCACTATATATATAAA GGTGCGGACCAAAATAGTTCTAATTATATAAATAAAACAAACGATATTTTATTTCCTAAT CATTTTAATAAGTCTACATACAATGATAATATAAAAAATATTTATGACACACCAAATGAT ACCCACTATAATAATAGTAGCACTTATTCGAATTTTGATCATAATAGTATGTATAGCACA AAAAATAATGTACCTTTTTCAAATCCTAATGATGATAAAATCTTTCAGTATCAGCAGCAT TTCCAGTACTCACGAAATTATATACCATCTCCAAACTCAGAAAAAATATTATACTTTTCT TGTGGAAATAAAAAAAAAGCTTTATTAATTGGAATAAATTATTGTGGTACATCAAATGAA TTAAATGGATGTATCAATGATGCAACAATAACAAAGGATTTGTTAATAAAAAAATATAAT TTTTATGATTCTTCGATGAATATATTAAAACTCGTAGATAATCAAACAAATCCAAATTAT AGACCAACAAAAAGAAATATATTATTAGCATTAGAATGGTTAGTTAAAGATAATAATCCT GGTGATATATTTTTTTTTTTTTATTCAGGTCATAGTTATAAAAAATATGATTATGCATGT ATTGAAAAAGATGGATATAATCAAACAATAGTACCTTGTGATTTTAAAACAGAAGGGGAA ATAATTGATAACGATTTACATAAATATTTAATACAGCCATTAAAAGATGGAACTAAGTTA GTATCGTATATAGATTGTCCAAACTCCGATGGAATATTAAATTTAGGATATAAATATAAA TTAAAAAAAGAAAAATGGAAAGAAACATATAATCCATTTCATGTTGTTTCAGATATTACA CAATTGAGTTATTCAAAATTTAAAGATTTTTCAACAGAAATGAATCTACTAGAGCATGTA CTAATTACAAATAATATCGAAACACTTACTTATTATCATGTACTTCAATCTATCCATTCA TATATAAATATGTATAATAAAAAAAAAAAAAATAAAATAATTTTAATGTCTTCACAAAAG TTTGGCATAGATAGAAAATTCGACTTTGATCATATTCTTAAAAATTCAAATTCAGACCTG GGTCAGCACAAAAAAATAATAAAATGGAAAAAAAACAAAAAAAATAGCTCGAAAAATTAG
  • Download Fasta

  • Fasta :-

    MSFEMAQIYVKVHELKFVNNSERNSHYVKIYWDDKKYKSQTKDGGHYIFNETFLIPITNI NYQNDQIIYVEVWESNLLNKQCAYTIFTLNNIKTGQIIKENIALIEVLKKCTLELSINIV RNQKDILFFNIKESLPTYQDQQIRNAIWENEDEASIIKQLININKFNGITNLGDYKNSQI YNEIFKKPKENNYVYKSGEGMQNSYDPISTPEYTSHYIYKGADQNSSNYINKTNDILFPN HFNKSTYNDNIKNIYDTPNDTHYNNSSTYSNFDHNSMYSTKNNVPFSNPNDDKIFQYQQH FQYSRNYIPSPNSEKILYFSCGNKKKALLIGINYCGTSNELNGCINDATITKDLLIKKYN FYDSSMNILKLVDNQTNPNYRPTKRNILLALEWLVKDNNPGDIFFFFYSGHSYKKYDYAC IEKDGYNQTIVPCDFKTEGEIIDNDLHKYLIQPLKDGTKLVSYIDCPNSDGILNLGYKYK LKKEKWKETYNPFHVVSDITQLSYSKFKDFSTEMNLLEHVLITNNIETLTYYHVLQSIHS YINMYNKKKKNKIILMSSQKFGIDRKFDFDHILKNSNSDLGQHKKIIKWKKNKKNSSKN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1130900412 SYSGHSYKKY0.996unspPCHAS_1130900596 SNKKNSSKN-0.994unsp

PCHAS_113090      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India