PCHAS_1145800 | lysophospholipase, putative

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1145800OTHER0.9999000.0000310.000069
No Results

  • Fasta :-

    >PCHAS_1145800 MEEIELNNDELRSTTVNKLDGDPKIGWLCNKNGLLLKTYGWVAKKAVGIIFLIHGIKSHT RLTFMRINLQMPNNDEGLVVDTNNYYIYKDSWIEKFNQNGYSVYGIDLQGHGESQAWKNV RGDFSSFDDIVNDVIQYMNQIQDEISNENQMDDESHDIVTTKKKRLPMYIIGHSMGGGIA LRILQLLGKEQKDKTNAGKSSNYKNRKAVLDKSTNINQIDNDMIEDMISDNSVKHISNKR CITNSKNDGPGTSSASISATINASTSDDHEIRYNYLDDLNIKGCVSLSGMVRLKTSRNAG NKSFKYFYLPAFSFLSCVMPHKRTSSSRYKKSEYYANICKYDKFRNSDEIKYRNISECIK ATVTLNGNIKYMPNDIPLLFVHSKDDTSCSYEAAHSFYNKANVHNKKFHPLDDMNHAITI ETGNEEVLKTVIDWISDVRSNCEDEIEDE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1145800.fa Sequence name : PCHAS_1145800 Sequence length : 449 VALUES OF COMPUTED PARAMETERS Coef20 : 3.420 CoefTot : 0.000 ChDiff : -5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.259 1.382 0.077 0.599 MesoH : -0.927 -0.005 -0.473 0.145 MuHd_075 : 28.861 19.093 8.134 6.214 MuHd_095 : 16.823 11.503 5.446 2.040 MuHd_100 : 14.727 7.790 3.261 1.352 MuHd_105 : 17.562 4.059 2.498 2.474 Hmax_075 : -7.233 2.100 -4.182 1.528 Hmax_095 : -4.000 5.700 -2.369 0.910 Hmax_100 : -7.900 -1.400 -5.325 0.030 Hmax_105 : -5.863 -1.400 -4.732 0.030 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9485 0.0515 DFMC : 0.9526 0.0474
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 449 PCHAS_1145800 MEEIELNNDELRSTTVNKLDGDPKIGWLCNKNGLLLKTYGWVAKKAVGIIFLIHGIKSHTRLTFMRINLQMPNNDEGLVV 80 DTNNYYIYKDSWIEKFNQNGYSVYGIDLQGHGESQAWKNVRGDFSSFDDIVNDVIQYMNQIQDEISNENQMDDESHDIVT 160 TKKKRLPMYIIGHSMGGGIALRILQLLGKEQKDKTNAGKSSNYKNRKAVLDKSTNINQIDNDMIEDMISDNSVKHISNKR 240 CITNSKNDGPGTSSASISATINASTSDDHEIRYNYLDDLNIKGCVSLSGMVRLKTSRNAGNKSFKYFYLPAFSFLSCVMP 320 HKRTSSSRYKKSEYYANICKYDKFRNSDEIKYRNISECIKATVTLNGNIKYMPNDIPLLFVHSKDDTSCSYEAAHSFYNK 400 ANVHNKKFHPLDDMNHAITIETGNEEVLKTVIDWISDVRSNCEDEIEDE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ..........P..................................................................... 400 ................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1145800 12 LNNDELR|ST 0.132 . PCHAS_1145800 18 RSTTVNK|LD 0.068 . PCHAS_1145800 24 KLDGDPK|IG 0.058 . PCHAS_1145800 31 IGWLCNK|NG 0.053 . PCHAS_1145800 37 KNGLLLK|TY 0.066 . PCHAS_1145800 44 TYGWVAK|KA 0.088 . PCHAS_1145800 45 YGWVAKK|AV 0.181 . PCHAS_1145800 57 FLIHGIK|SH 0.069 . PCHAS_1145800 61 GIKSHTR|LT 0.092 . PCHAS_1145800 66 TRLTFMR|IN 0.106 . PCHAS_1145800 89 NNYYIYK|DS 0.074 . PCHAS_1145800 95 KDSWIEK|FN 0.080 . PCHAS_1145800 118 GESQAWK|NV 0.097 . PCHAS_1145800 121 QAWKNVR|GD 0.112 . PCHAS_1145800 162 HDIVTTK|KK 0.062 . PCHAS_1145800 163 DIVTTKK|KR 0.072 . PCHAS_1145800 164 IVTTKKK|RL 0.093 . PCHAS_1145800 165 VTTKKKR|LP 0.154 . PCHAS_1145800 182 GGGIALR|IL 0.075 . PCHAS_1145800 189 ILQLLGK|EQ 0.062 . PCHAS_1145800 192 LLGKEQK|DK 0.079 . PCHAS_1145800 194 GKEQKDK|TN 0.064 . PCHAS_1145800 199 DKTNAGK|SS 0.078 . PCHAS_1145800 204 GKSSNYK|NR 0.075 . PCHAS_1145800 206 SSNYKNR|KA 0.135 . PCHAS_1145800 207 SNYKNRK|AV 0.128 . PCHAS_1145800 212 RKAVLDK|ST 0.105 . PCHAS_1145800 234 ISDNSVK|HI 0.077 . PCHAS_1145800 239 VKHISNK|RC 0.065 . PCHAS_1145800 240 KHISNKR|CI 0.174 . PCHAS_1145800 246 RCITNSK|ND 0.072 . PCHAS_1145800 272 SDDHEIR|YN 0.082 . PCHAS_1145800 282 LDDLNIK|GC 0.056 . PCHAS_1145800 292 SLSGMVR|LK 0.081 . PCHAS_1145800 294 SGMVRLK|TS 0.066 . PCHAS_1145800 297 VRLKTSR|NA 0.107 . PCHAS_1145800 302 SRNAGNK|SF 0.078 . PCHAS_1145800 305 AGNKSFK|YF 0.070 . PCHAS_1145800 322 SCVMPHK|RT 0.067 . PCHAS_1145800 323 CVMPHKR|TS 0.160 . PCHAS_1145800 328 KRTSSSR|YK 0.105 . PCHAS_1145800 330 TSSSRYK|KS 0.078 . PCHAS_1145800 331 SSSRYKK|SE 0.585 *ProP* PCHAS_1145800 340 YYANICK|YD 0.056 . PCHAS_1145800 343 NICKYDK|FR 0.059 . PCHAS_1145800 345 CKYDKFR|NS 0.103 . PCHAS_1145800 351 RNSDEIK|YR 0.081 . PCHAS_1145800 353 SDEIKYR|NI 0.155 . PCHAS_1145800 360 NISECIK|AT 0.066 . PCHAS_1145800 370 TLNGNIK|YM 0.067 . PCHAS_1145800 384 LLFVHSK|DD 0.069 . PCHAS_1145800 400 AHSFYNK|AN 0.071 . PCHAS_1145800 406 KANVHNK|KF 0.082 . PCHAS_1145800 407 ANVHNKK|FH 0.093 . PCHAS_1145800 429 GNEEVLK|TV 0.089 . PCHAS_1145800 439 DWISDVR|SN 0.099 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1145800 ATGGAAGAAATTGAACTGAATAATGATGAGTTAAGAAGTACTACAGTAAATAAATTAGAT GGTGATCCTAAGATAGGTTGGTTATGTAATAAAAATGGTTTACTTTTAAAAACATATGGG TGGGTAGCTAAAAAGGCTGTAGGAATTATATTTTTAATACATGGAATAAAATCCCATACT CGATTAACTTTTATGAGAATAAATTTACAAATGCCAAATAACGATGAAGGCTTAGTAGTA GACACTAATAATTACTATATTTATAAAGATAGTTGGATTGAAAAATTTAATCAAAATGGT TATTCAGTATATGGGATCGATTTGCAAGGACATGGCGAATCACAAGCATGGAAAAATGTA AGAGGTGATTTTAGTTCTTTTGATGATATAGTTAATGATGTAATACAATATATGAATCAA ATTCAAGATGAAATATCGAATGAAAATCAAATGGATGACGAATCTCATGATATAGTGACC ACTAAAAAAAAAAGACTTCCTATGTATATTATTGGGCATTCGATGGGAGGAGGTATCGCT TTAAGAATATTACAATTGTTAGGGAAAGAACAAAAAGATAAAACTAATGCTGGAAAGTCA AGTAACTATAAAAATCGTAAAGCAGTGTTAGACAAATCTACTAATATTAATCAAATTGAC AATGATATGATAGAAGATATGATTAGTGATAATTCTGTAAAACATATTTCGAATAAGCGC TGCATTACGAATTCTAAAAATGATGGTCCTGGTACTTCTAGTGCTAGTATCTCTGCTACG ATAAATGCTAGTACTAGTGATGACCATGAAATACGTTATAATTATTTAGATGATTTAAAT ATTAAAGGTTGCGTATCTTTATCTGGTATGGTGAGATTAAAAACATCACGGAATGCCGGA AACAAATCATTTAAGTATTTTTATTTACCTGCATTTAGCTTCTTGTCTTGTGTTATGCCT CATAAACGAACTTCATCATCACGCTATAAAAAGTCCGAATATTATGCTAATATATGTAAA TATGATAAATTTCGAAATAGTGATGAAATAAAATATAGAAATATTTCTGAATGTATAAAA GCAACTGTCACATTGAATGGTAATATTAAATATATGCCAAATGATATTCCTTTACTATTT GTGCATTCAAAAGATGATACATCGTGTTCTTATGAGGCAGCACATTCATTTTATAATAAA GCAAATGTTCATAACAAAAAATTTCATCCTCTTGATGATATGAATCATGCTATAACGATA GAGACAGGAAATGAAGAAGTTTTAAAAACAGTTATTGATTGGATTTCGGATGTAAGAAGC AATTGTGAAGACGAAATAGAAGATGAATAA
  • Download Fasta

  • Fasta :-

    MEEIELNNDELRSTTVNKLDGDPKIGWLCNKNGLLLKTYGWVAKKAVGIIFLIHGIKSHT RLTFMRINLQMPNNDEGLVVDTNNYYIYKDSWIEKFNQNGYSVYGIDLQGHGESQAWKNV RGDFSSFDDIVNDVIQYMNQIQDEISNENQMDDESHDIVTTKKKRLPMYIIGHSMGGGIA LRILQLLGKEQKDKTNAGKSSNYKNRKAVLDKSTNINQIDNDMIEDMISDNSVKHISNKR CITNSKNDGPGTSSASISATINASTSDDHEIRYNYLDDLNIKGCVSLSGMVRLKTSRNAG NKSFKYFYLPAFSFLSCVMPHKRTSSSRYKKSEYYANICKYDKFRNSDEIKYRNISECIK ATVTLNGNIKYMPNDIPLLFVHSKDDTSCSYEAAHSFYNKANVHNKKFHPLDDMNHAITI ETGNEEVLKTVIDWISDVRSNCEDEIEDE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1145800325 SHKRTSSSRY0.997unspPCHAS_1145800440 SSDVRSNCED0.992unsp

PCHAS_114580      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India