PCHAS_1204600 | peptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1204600OTHER0.9374550.0326330.029912
No Results

  • Fasta :-

    >PCHAS_1204600 MVNFNNFINKCICVFFSNIPKTFYGNEKNKLYKEITDNVKNSKIINFPIDKDSVNFFFIS SEINKLLNIKNKIINDNIQKNIIVEKCFNLYYLLATHTKLKKETFYKKRILECIEENISK YIYNNKGQKIDEKNIPYSIRIRNNQSVGNLFNELKEDCSKYLKKINNVKVRHLIIDKNEI KIDEGWKKSHEYTFNKNKLKIPISKYNYEYILNGLEESESRKKVLELLNSPYKNLNLNND VINILKKRYDLANKLGYKNWGHYSISQFTMEKNNYENIEKFLNIIKEKVEKDYDKIIYDI LKISNFSKFSNKNNKKNYWENNTHKLAIYDWSFYYNKIMNKSDEYLINSYFPQNIVLKNF MEIVSRIYNFFYEEIKDEEIKKKWPKDSIIYKIDRHQSNVKKGTTLNYENKNVFNNSFLG YIYIIPYMDINFKDYFRVPSMSSLPNTCLISPGHVLIDYKFIRTVPIKNKLFSSSEILTL FHEFGHAYHLLLLSNNLSLSNLFNIPLDYAEFFSHINEHIANNYDIISKLSNKIGNNLKI SENLFKTIKFDCSRLGNIYSQSIIDYVIHDLNPHLFFSNTMNSSSENKIENEEDNLCNFY ETIEKYFPYKFCSSYSIHSTSFPYHFSSYYSGAVLSYLFAETRVLLNVSTDQINLKKNNT LTSFQKKFYDIILNDFKTDNYPSVINSLINSKKSEKFFK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1204600.fa Sequence name : PCHAS_1204600 Sequence length : 699 VALUES OF COMPUTED PARAMETERS Coef20 : 4.191 CoefTot : -1.578 ChDiff : 23 ZoneTo : 26 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.082 1.147 0.066 0.575 MesoH : -0.155 0.424 -0.340 0.279 MuHd_075 : 19.303 14.563 6.887 4.341 MuHd_095 : 40.588 30.785 12.305 10.516 MuHd_100 : 32.906 24.684 9.883 8.586 MuHd_105 : 21.907 16.669 5.844 5.853 Hmax_075 : 12.513 14.500 2.789 5.340 Hmax_095 : 22.838 24.400 6.000 8.129 Hmax_100 : 21.600 21.200 5.490 7.750 Hmax_105 : 13.700 16.100 2.791 5.770 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1173 0.8827 DFMC : 0.3824 0.6176 This protein is probably imported in mitochondria. f(Ser) = 0.0385 f(Arg) = 0.0000 CMi = 0.54945 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 699 PCHAS_1204600 MVNFNNFINKCICVFFSNIPKTFYGNEKNKLYKEITDNVKNSKIINFPIDKDSVNFFFISSEINKLLNIKNKIINDNIQK 80 NIIVEKCFNLYYLLATHTKLKKETFYKKRILECIEENISKYIYNNKGQKIDEKNIPYSIRIRNNQSVGNLFNELKEDCSK 160 YLKKINNVKVRHLIIDKNEIKIDEGWKKSHEYTFNKNKLKIPISKYNYEYILNGLEESESRKKVLELLNSPYKNLNLNND 240 VINILKKRYDLANKLGYKNWGHYSISQFTMEKNNYENIEKFLNIIKEKVEKDYDKIIYDILKISNFSKFSNKNNKKNYWE 320 NNTHKLAIYDWSFYYNKIMNKSDEYLINSYFPQNIVLKNFMEIVSRIYNFFYEEIKDEEIKKKWPKDSIIYKIDRHQSNV 400 KKGTTLNYENKNVFNNSFLGYIYIIPYMDINFKDYFRVPSMSSLPNTCLISPGHVLIDYKFIRTVPIKNKLFSSSEILTL 480 FHEFGHAYHLLLLSNNLSLSNLFNIPLDYAEFFSHINEHIANNYDIISKLSNKIGNNLKISENLFKTIKFDCSRLGNIYS 560 QSIIDYVIHDLNPHLFFSNTMNSSSENKIENEEDNLCNFYETIEKYFPYKFCSSYSIHSTSFPYHFSSYYSGAVLSYLFA 640 ETRVLLNVSTDQINLKKNNTLTSFQKKFYDIILNDFKTDNYPSVINSLINSKKSEKFFK 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1204600 10 FNNFINK|CI 0.077 . PCHAS_1204600 21 FFSNIPK|TF 0.068 . PCHAS_1204600 28 TFYGNEK|NK 0.067 . PCHAS_1204600 30 YGNEKNK|LY 0.073 . PCHAS_1204600 33 EKNKLYK|EI 0.082 . PCHAS_1204600 40 EITDNVK|NS 0.055 . PCHAS_1204600 43 DNVKNSK|II 0.060 . PCHAS_1204600 51 INFPIDK|DS 0.061 . PCHAS_1204600 65 ISSEINK|LL 0.069 . PCHAS_1204600 70 NKLLNIK|NK 0.057 . PCHAS_1204600 72 LLNIKNK|II 0.086 . PCHAS_1204600 80 INDNIQK|NI 0.060 . PCHAS_1204600 86 KNIIVEK|CF 0.061 . PCHAS_1204600 99 LLATHTK|LK 0.059 . PCHAS_1204600 101 ATHTKLK|KE 0.059 . PCHAS_1204600 102 THTKLKK|ET 0.094 . PCHAS_1204600 107 KKETFYK|KR 0.058 . PCHAS_1204600 108 KETFYKK|RI 0.085 . PCHAS_1204600 109 ETFYKKR|IL 0.266 . PCHAS_1204600 120 IEENISK|YI 0.069 . PCHAS_1204600 126 KYIYNNK|GQ 0.064 . PCHAS_1204600 129 YNNKGQK|ID 0.070 . PCHAS_1204600 133 GQKIDEK|NI 0.064 . PCHAS_1204600 140 NIPYSIR|IR 0.078 . PCHAS_1204600 142 PYSIRIR|NN 0.096 . PCHAS_1204600 155 NLFNELK|ED 0.057 . PCHAS_1204600 160 LKEDCSK|YL 0.071 . PCHAS_1204600 163 DCSKYLK|KI 0.062 . PCHAS_1204600 164 CSKYLKK|IN 0.120 . PCHAS_1204600 169 KKINNVK|VR 0.058 . PCHAS_1204600 171 INNVKVR|HL 0.129 . PCHAS_1204600 177 RHLIIDK|NE 0.057 . PCHAS_1204600 181 IDKNEIK|ID 0.065 . PCHAS_1204600 187 KIDEGWK|KS 0.058 . PCHAS_1204600 188 IDEGWKK|SH 0.143 . PCHAS_1204600 196 HEYTFNK|NK 0.063 . PCHAS_1204600 198 YTFNKNK|LK 0.061 . PCHAS_1204600 200 FNKNKLK|IP 0.065 . PCHAS_1204600 205 LKIPISK|YN 0.071 . PCHAS_1204600 221 LEESESR|KK 0.069 . PCHAS_1204600 222 EESESRK|KV 0.117 . PCHAS_1204600 223 ESESRKK|VL 0.075 . PCHAS_1204600 233 LLNSPYK|NL 0.065 . PCHAS_1204600 246 DVINILK|KR 0.053 . PCHAS_1204600 247 VINILKK|RY 0.090 . PCHAS_1204600 248 INILKKR|YD 0.171 . PCHAS_1204600 254 RYDLANK|LG 0.054 . PCHAS_1204600 258 ANKLGYK|NW 0.064 . PCHAS_1204600 272 SQFTMEK|NN 0.061 . PCHAS_1204600 280 NYENIEK|FL 0.063 . PCHAS_1204600 286 KFLNIIK|EK 0.053 . PCHAS_1204600 288 LNIIKEK|VE 0.064 . PCHAS_1204600 291 IKEKVEK|DY 0.096 . PCHAS_1204600 295 VEKDYDK|II 0.080 . PCHAS_1204600 302 IIYDILK|IS 0.058 . PCHAS_1204600 308 KISNFSK|FS 0.080 . PCHAS_1204600 312 FSKFSNK|NN 0.062 . PCHAS_1204600 315 FSNKNNK|KN 0.075 . PCHAS_1204600 316 SNKNNKK|NY 0.112 . PCHAS_1204600 325 WENNTHK|LA 0.067 . PCHAS_1204600 337 WSFYYNK|IM 0.061 . PCHAS_1204600 341 YNKIMNK|SD 0.082 . PCHAS_1204600 358 PQNIVLK|NF 0.067 . PCHAS_1204600 366 FMEIVSR|IY 0.073 . PCHAS_1204600 376 FFYEEIK|DE 0.066 . PCHAS_1204600 381 IKDEEIK|KK 0.062 . PCHAS_1204600 382 KDEEIKK|KW 0.078 . PCHAS_1204600 383 DEEIKKK|WP 0.116 . PCHAS_1204600 386 IKKKWPK|DS 0.083 . PCHAS_1204600 392 KDSIIYK|ID 0.071 . PCHAS_1204600 395 IIYKIDR|HQ 0.098 . PCHAS_1204600 401 RHQSNVK|KG 0.059 . PCHAS_1204600 402 HQSNVKK|GT 0.137 . PCHAS_1204600 411 TLNYENK|NV 0.080 . PCHAS_1204600 433 YMDINFK|DY 0.073 . PCHAS_1204600 437 NFKDYFR|VP 0.066 . PCHAS_1204600 460 HVLIDYK|FI 0.066 . PCHAS_1204600 463 IDYKFIR|TV 0.131 . PCHAS_1204600 468 IRTVPIK|NK 0.059 . PCHAS_1204600 470 TVPIKNK|LF 0.071 . PCHAS_1204600 529 NYDIISK|LS 0.061 . PCHAS_1204600 533 ISKLSNK|IG 0.057 . PCHAS_1204600 539 KIGNNLK|IS 0.064 . PCHAS_1204600 546 ISENLFK|TI 0.059 . PCHAS_1204600 549 NLFKTIK|FD 0.063 . PCHAS_1204600 554 IKFDCSR|LG 0.072 . PCHAS_1204600 588 NSSSENK|IE 0.063 . PCHAS_1204600 605 FYETIEK|YF 0.058 . PCHAS_1204600 610 EKYFPYK|FC 0.076 . PCHAS_1204600 643 YLFAETR|VL 0.072 . PCHAS_1204600 656 TDQINLK|KN 0.065 . PCHAS_1204600 657 DQINLKK|NN 0.077 . PCHAS_1204600 666 TLTSFQK|KF 0.067 . PCHAS_1204600 667 LTSFQKK|FY 0.263 . PCHAS_1204600 677 IILNDFK|TD 0.051 . PCHAS_1204600 692 NSLINSK|KS 0.060 . PCHAS_1204600 693 SLINSKK|SE 0.117 . PCHAS_1204600 696 NSKKSEK|FF 0.069 . PCHAS_1204600 699 KSEKFFK|-- 0.079 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1204600 ATGGTGAACTTTAATAATTTTATAAATAAATGTATTTGTGTATTTTTTTCAAATATTCCC AAGACTTTTTATGGGAATGAAAAAAACAAATTGTATAAGGAAATTACAGATAATGTCAAA AACTCTAAAATAATTAATTTTCCTATAGACAAAGATTCAGTTAATTTTTTTTTTATTTCA AGTGAAATTAACAAACTTCTTAATATAAAAAATAAAATAATTAATGATAATATTCAAAAA AATATAATCGTTGAAAAATGTTTTAATCTATACTATCTATTAGCTACACACACAAAATTA AAAAAGGAAACATTTTATAAAAAAAGAATATTGGAATGTATTGAAGAAAATATTTCTAAA TATATATATAATAATAAGGGTCAGAAGATTGATGAAAAAAATATTCCATATAGTATACGC ATAAGAAATAATCAATCGGTGGGAAACTTATTTAATGAGCTGAAAGAAGATTGCTCAAAG TATTTGAAAAAAATTAACAATGTTAAAGTTAGGCATTTAATAATAGACAAGAATGAAATA AAAATAGACGAGGGATGGAAGAAAAGCCATGAGTACACTTTTAACAAAAATAAATTAAAA ATTCCGATCAGTAAGTATAATTATGAATATATTTTAAATGGGCTTGAAGAATCTGAGTCT CGAAAAAAGGTACTTGAGTTACTTAACAGTCCATATAAAAATTTAAATTTAAATAATGAT GTAATAAATATACTAAAAAAAAGATATGATTTGGCTAATAAATTAGGGTATAAAAATTGG GGGCATTATTCTATATCCCAATTTACAATGGAAAAAAATAATTATGAAAATATAGAAAAG TTTCTTAATATAATTAAAGAAAAGGTAGAAAAAGATTATGATAAAATAATTTATGATATA TTAAAAATAAGCAATTTTAGTAAATTTAGCAATAAAAATAATAAAAAAAATTATTGGGAA AATAATACACACAAACTAGCCATTTATGATTGGAGTTTTTATTATAATAAAATTATGAAC AAGTCAGATGAATATTTGATAAATAGCTATTTTCCACAAAATATAGTTTTAAAAAATTTT ATGGAAATAGTTTCAAGAATATATAATTTTTTTTATGAAGAAATTAAAGATGAGGAAATA AAAAAAAAATGGCCAAAAGATAGCATAATATATAAAATAGATCGACATCAAAGTAATGTA AAAAAAGGGACTACACTAAATTATGAAAATAAAAATGTGTTTAATAATTCATTTTTAGGA TATATATATATAATTCCATATATGGACATAAATTTTAAAGATTATTTTAGGGTCCCTTCA ATGAGTTCTTTACCAAATACATGTTTAATAAGCCCAGGTCATGTATTGATAGATTATAAG TTTATTAGAACAGTACCTATTAAAAATAAATTATTTAGTTCATCAGAAATATTAACATTA TTTCACGAATTTGGCCATGCATATCATTTATTATTATTATCAAATAATTTGAGTTTATCA AATTTATTTAATATTCCCTTAGATTATGCTGAATTTTTTTCACATATAAATGAGCATATA GCTAATAATTATGATATAATTAGTAAGTTGTCTAATAAAATTGGTAATAATTTAAAAATA AGTGAAAATTTATTTAAAACAATTAAATTTGATTGTTCAAGACTCGGTAATATATATTCA CAGTCTATTATAGATTATGTTATACATGACCTTAATCCACATTTGTTTTTTTCAAACACA ATGAATAGTAGTTCTGAAAATAAGATAGAGAACGAAGAAGATAATTTATGCAATTTTTAT GAAACGATTGAAAAATATTTCCCTTATAAATTTTGTTCCTCTTATTCAATACATTCCACT AGTTTTCCATATCATTTTTCAAGTTATTATTCTGGGGCTGTTTTAAGTTATTTATTTGCA GAGACAAGAGTTCTTTTAAATGTTTCAACAGATCAAATTAATTTAAAAAAAAATAATACA CTAACCTCTTTTCAAAAGAAATTTTATGATATAATTCTTAACGATTTTAAAACAGACAAT TATCCTTCCGTTATAAATAGTTTAATAAATTCGAAGAAAAGTGAAAAATTTTTTAAGTAG
  • Download Fasta

  • Fasta :-

    MVNFNNFINKCICVFFSNIPKTFYGNEKNKLYKEITDNVKNSKIINFPIDKDSVNFFFIS SEINKLLNIKNKIINDNIQKNIIVEKCFNLYYLLATHTKLKKETFYKKRILECIEENISK YIYNNKGQKIDEKNIPYSIRIRNNQSVGNLFNELKEDCSKYLKKINNVKVRHLIIDKNEI KIDEGWKKSHEYTFNKNKLKIPISKYNYEYILNGLEESESRKKVLELLNSPYKNLNLNND VINILKKRYDLANKLGYKNWGHYSISQFTMEKNNYENIEKFLNIIKEKVEKDYDKIIYDI LKISNFSKFSNKNNKKNYWENNTHKLAIYDWSFYYNKIMNKSDEYLINSYFPQNIVLKNF MEIVSRIYNFFYEEIKDEEIKKKWPKDSIIYKIDRHQSNVKKGTTLNYENKNVFNNSFLG YIYIIPYMDINFKDYFRVPSMSSLPNTCLISPGHVLIDYKFIRTVPIKNKLFSSSEILTL FHEFGHAYHLLLLSNNLSLSNLFNIPLDYAEFFSHINEHIANNYDIISKLSNKIGNNLKI SENLFKTIKFDCSRLGNIYSQSIIDYVIHDLNPHLFFSNTMNSSSENKIENEEDNLCNFY ETIEKYFPYKFCSSYSIHSTSFPYHFSSYYSGAVLSYLFAETRVLLNVSTDQINLKKNNT LTSFQKKFYDIILNDFKTDNYPSVINSLINSKKSEKFFK

  • title: Zn binding site
  • coordinates: H482,H486,E511
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1204600583 SNTMNSSSEN0.99unspPCHAS_1204600694 SNSKKSEKFF0.997unsp

PCHAS_120460      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India