PCHAS_1220900 | lysophospholipase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1220900OTHER0.9988110.0009380.000252
No Results

  • Fasta :-

    >PCHAS_1220900 MELSQEEAQSVQPILRSGNKDPSIMGDPDIGFFTNKHGLKIKTLKWLVKAPVGIVFLVHS LNSHCRFDYLKHNVTIPNNDKAILNDGENFYVHKDSWIEELNKNGYSVYGLDLQGHGESE CYKNKKTYINEFDDFADDILQYMNGVHESIVNEAAKDNQENDNNAIGQKKRCTKCDLILK DESDICCSNEDKIIANGLYLRHPEKNQYKKPDYNIDPYKTPIPMYLVGLSMGGNIVLRIL ELLSQRRYKYYNRLNIKGACSLSGMLSAKDVRKKPSWKYFYIPLMKLSSVFFPKSRFAPN TTYEAFPFLKDLYGYDKIFYDKPITNKFVCKLLEAADNLNKDADKVVKDVPILIVHSAND QKCSHDSAQEFYNNLKTKKKEFHTLDDMEHMITMEPGNEQVIKKLVDWMAGTQKETPKKK KVKKNLRSADDKSAASSEASPTQSTSALTDLPKDKATQDQVSQEQPAEEQATEEQPVEEQ PIEEQPVEEQPIEEQPVEEQATEDQSAEEQDTQEQPTEEHDTQEQPAEEHDTQEQPTEEH DTQEHPAEEHDTQEQPTEEHDTQEHPAEEQDTQEQPAEEQDAQDQSAEEQDIQEQPAEEQ DIQEQPAEEQAIQDQSVEEQAAEEQAAEEQAAQDQAAQEQPDEEQALENEAA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1220900.fa Sequence name : PCHAS_1220900 Sequence length : 652 VALUES OF COMPUTED PARAMETERS Coef20 : 3.429 CoefTot : 0.000 ChDiff : -69 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.429 1.476 0.154 0.621 MesoH : -0.965 0.070 -0.492 0.126 MuHd_075 : 29.954 9.650 7.534 4.139 MuHd_095 : 21.837 22.492 7.879 6.905 MuHd_100 : 34.306 25.463 10.412 8.099 MuHd_105 : 37.941 24.107 10.549 7.868 Hmax_075 : 4.800 3.800 -0.363 2.690 Hmax_095 : 4.700 11.600 0.537 4.260 Hmax_100 : 7.900 11.600 0.537 4.260 Hmax_105 : 6.038 10.062 0.277 3.867 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9494 0.0506 DFMC : 0.9198 0.0802
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 652 PCHAS_1220900 MELSQEEAQSVQPILRSGNKDPSIMGDPDIGFFTNKHGLKIKTLKWLVKAPVGIVFLVHSLNSHCRFDYLKHNVTIPNND 80 KAILNDGENFYVHKDSWIEELNKNGYSVYGLDLQGHGESECYKNKKTYINEFDDFADDILQYMNGVHESIVNEAAKDNQE 160 NDNNAIGQKKRCTKCDLILKDESDICCSNEDKIIANGLYLRHPEKNQYKKPDYNIDPYKTPIPMYLVGLSMGGNIVLRIL 240 ELLSQRRYKYYNRLNIKGACSLSGMLSAKDVRKKPSWKYFYIPLMKLSSVFFPKSRFAPNTTYEAFPFLKDLYGYDKIFY 320 DKPITNKFVCKLLEAADNLNKDADKVVKDVPILIVHSANDQKCSHDSAQEFYNNLKTKKKEFHTLDDMEHMITMEPGNEQ 400 VIKKLVDWMAGTQKETPKKKKVKKNLRSADDKSAASSEASPTQSTSALTDLPKDKATQDQVSQEQPAEEQATEEQPVEEQ 480 PIEEQPVEEQPIEEQPVEEQATEDQSAEEQDTQEQPTEEHDTQEQPAEEHDTQEQPTEEHDTQEHPAEEHDTQEQPTEEH 560 DTQEHPAEEQDTQEQPAEEQDAQDQSAEEQDIQEQPAEEQDIQEQPAEEQAIQDQSVEEQAAEEQAAEEQAAQDQAAQEQ 640 PDEEQALENEAA 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1220900 16 SVQPILR|SG 0.117 . PCHAS_1220900 20 ILRSGNK|DP 0.073 . PCHAS_1220900 36 IGFFTNK|HG 0.061 . PCHAS_1220900 40 TNKHGLK|IK 0.058 . PCHAS_1220900 42 KHGLKIK|TL 0.068 . PCHAS_1220900 45 LKIKTLK|WL 0.074 . PCHAS_1220900 49 TLKWLVK|AP 0.068 . PCHAS_1220900 66 SLNSHCR|FD 0.110 . PCHAS_1220900 71 CRFDYLK|HN 0.065 . PCHAS_1220900 81 TIPNNDK|AI 0.062 . PCHAS_1220900 94 ENFYVHK|DS 0.083 . PCHAS_1220900 103 WIEELNK|NG 0.056 . PCHAS_1220900 123 GESECYK|NK 0.084 . PCHAS_1220900 125 SECYKNK|KT 0.074 . PCHAS_1220900 126 ECYKNKK|TY 0.119 . PCHAS_1220900 156 IVNEAAK|DN 0.079 . PCHAS_1220900 169 NNAIGQK|KR 0.059 . PCHAS_1220900 170 NAIGQKK|RC 0.088 . PCHAS_1220900 171 AIGQKKR|CT 0.193 . PCHAS_1220900 174 QKKRCTK|CD 0.108 . PCHAS_1220900 180 KCDLILK|DE 0.063 . PCHAS_1220900 192 CCSNEDK|II 0.070 . PCHAS_1220900 201 ANGLYLR|HP 0.083 . PCHAS_1220900 205 YLRHPEK|NQ 0.065 . PCHAS_1220900 209 PEKNQYK|KP 0.064 . PCHAS_1220900 210 EKNQYKK|PD 0.117 . PCHAS_1220900 219 YNIDPYK|TP 0.062 . PCHAS_1220900 238 GGNIVLR|IL 0.082 . PCHAS_1220900 246 LELLSQR|RY 0.063 . PCHAS_1220900 247 ELLSQRR|YK 0.111 . PCHAS_1220900 249 LSQRRYK|YY 0.148 . PCHAS_1220900 253 RYKYYNR|LN 0.083 . PCHAS_1220900 257 YNRLNIK|GA 0.071 . PCHAS_1220900 269 SGMLSAK|DV 0.141 . PCHAS_1220900 272 LSAKDVR|KK 0.073 . PCHAS_1220900 273 SAKDVRK|KP 0.091 . PCHAS_1220900 274 AKDVRKK|PS 0.115 . PCHAS_1220900 278 RKKPSWK|YF 0.075 . PCHAS_1220900 286 FYIPLMK|LS 0.062 . PCHAS_1220900 294 SSVFFPK|SR 0.097 . PCHAS_1220900 296 VFFPKSR|FA 0.091 . PCHAS_1220900 310 EAFPFLK|DL 0.073 . PCHAS_1220900 317 DLYGYDK|IF 0.062 . PCHAS_1220900 322 DKIFYDK|PI 0.066 . PCHAS_1220900 327 DKPITNK|FV 0.090 . PCHAS_1220900 331 TNKFVCK|LL 0.084 . PCHAS_1220900 341 AADNLNK|DA 0.082 . PCHAS_1220900 345 LNKDADK|VV 0.073 . PCHAS_1220900 348 DADKVVK|DV 0.094 . PCHAS_1220900 362 HSANDQK|CS 0.073 . PCHAS_1220900 376 EFYNNLK|TK 0.063 . PCHAS_1220900 378 YNNLKTK|KK 0.074 . PCHAS_1220900 379 NNLKTKK|KE 0.096 . PCHAS_1220900 380 NLKTKKK|EF 0.132 . PCHAS_1220900 403 GNEQVIK|KL 0.079 . PCHAS_1220900 404 NEQVIKK|LV 0.183 . PCHAS_1220900 414 WMAGTQK|ET 0.065 . PCHAS_1220900 418 TQKETPK|KK 0.066 . PCHAS_1220900 419 QKETPKK|KK 0.087 . PCHAS_1220900 420 KETPKKK|KV 0.196 . PCHAS_1220900 421 ETPKKKK|VK 0.090 . PCHAS_1220900 423 PKKKKVK|KN 0.070 . PCHAS_1220900 424 KKKKVKK|NL 0.137 . PCHAS_1220900 427 KVKKNLR|SA 0.191 . PCHAS_1220900 432 LRSADDK|SA 0.143 . PCHAS_1220900 453 ALTDLPK|DK 0.069 . PCHAS_1220900 455 TDLPKDK|AT 0.088 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1220900 ATGGAGCTATCTCAAGAAGAAGCACAAAGTGTCCAGCCCATACTAAGGTCGGGTAATAAA GACCCATCAATAATGGGTGATCCTGATATTGGGTTTTTTACAAATAAACATGGTTTGAAG ATAAAAACATTAAAATGGCTTGTCAAGGCACCGGTAGGAATAGTATTTTTAGTGCACTCT TTAAATTCCCATTGTCGTTTTGATTATTTAAAACATAATGTCACTATACCAAATAATGAC AAGGCTATTTTAAATGATGGCGAAAATTTTTATGTCCATAAAGATAGTTGGATTGAAGAA TTAAACAAAAATGGGTATTCTGTTTATGGTTTAGATTTACAAGGACATGGTGAATCAGAA TGCTATAAAAATAAAAAAACCTACATTAATGAGTTTGATGATTTTGCTGATGATATACTT CAATATATGAATGGGGTACATGAATCAATCGTTAACGAAGCTGCTAAGGATAATCAAGAA AATGATAATAATGCAATAGGACAAAAAAAGAGATGTACCAAATGTGATTTAATTTTAAAA GATGAATCTGATATCTGTTGTTCTAACGAAGATAAAATTATAGCCAATGGTTTATATTTA CGTCATCCCGAAAAAAATCAATATAAAAAACCTGACTATAACATAGATCCATATAAAACA CCTATACCAATGTATTTAGTTGGATTATCAATGGGAGGAAATATTGTTTTGAGAATATTG GAACTGTTATCACAAAGGAGATACAAATATTATAATCGACTAAATATAAAAGGTGCTTGT TCATTATCAGGAATGTTATCAGCAAAGGATGTAAGAAAAAAACCTTCATGGAAATATTTT TATATACCGTTGATGAAGTTATCATCCGTGTTTTTTCCAAAATCGAGATTTGCACCAAAT ACAACTTATGAAGCATTTCCATTTTTAAAAGATTTATATGGATATGATAAAATATTTTAT GACAAACCTATTACTAATAAATTTGTTTGTAAATTATTGGAAGCTGCTGATAATTTAAAT AAGGATGCAGACAAAGTTGTCAAAGATGTGCCCATACTTATTGTCCATTCTGCTAATGAT CAAAAATGCAGTCACGACTCTGCTCAGGAATTTTATAATAATTTGAAAACTAAAAAAAAA GAATTTCACACATTAGACGATATGGAACATATGATTACAATGGAGCCCGGAAATGAACAG GTTATCAAAAAACTTGTAGATTGGATGGCAGGTACACAAAAAGAGACCCCCAAAAAAAAA AAAGTTAAAAAAAATCTCAGAAGTGCTGATGATAAGAGCGCCGCATCAAGTGAGGCTTCA CCAACGCAAAGCACTAGTGCTTTAACCGATCTTCCAAAGGACAAAGCTACCCAAGATCAA GTTTCCCAAGAGCAACCTGCCGAAGAGCAAGCTACCGAAGAGCAACCTGTCGAAGAGCAA CCTATCGAAGAGCAACCTGTCGAAGAGCAACCTATCGAAGAGCAACCTGTCGAAGAGCAA GCTACTGAAGATCAATCTGCCGAAGAGCAAGATACCCAAGAGCAACCTACCGAAGAACAC GATACCCAAGAGCAACCTGCCGAAGAACACGATACCCAAGAGCAACCTACCGAAGAACAC GATACCCAAGAGCACCCTGCCGAAGAACACGATACCCAAGAGCAACCTACCGAAGAACAC GATACCCAAGAGCACCCTGCCGAAGAGCAAGATACCCAAGAGCAACCTGCCGAAGAGCAA GATGCCCAAGATCAATCTGCCGAAGAGCAAGATATCCAAGAGCAACCTGCCGAAGAGCAA GATATCCAAGAGCAACCTGCCGAAGAGCAAGCTATCCAAGATCAATCTGTCGAAGAGCAA GCTGCCGAAGAGCAAGCTGCCGAAGAGCAAGCTGCCCAAGATCAAGCTGCCCAAGAGCAA CCTGACGAAGAGCAAGCTTTGGAAAACGAGGCTGCATAA
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  • Fasta :-

    MELSQEEAQSVQPILRSGNKDPSIMGDPDIGFFTNKHGLKIKTLKWLVKAPVGIVFLVHS LNSHCRFDYLKHNVTIPNNDKAILNDGENFYVHKDSWIEELNKNGYSVYGLDLQGHGESE CYKNKKTYINEFDDFADDILQYMNGVHESIVNEAAKDNQENDNNAIGQKKRCTKCDLILK DESDICCSNEDKIIANGLYLRHPEKNQYKKPDYNIDPYKTPIPMYLVGLSMGGNIVLRIL ELLSQRRYKYYNRLNIKGACSLSGMLSAKDVRKKPSWKYFYIPLMKLSSVFFPKSRFAPN TTYEAFPFLKDLYGYDKIFYDKPITNKFVCKLLEAADNLNKDADKVVKDVPILIVHSAND QKCSHDSAQEFYNNLKTKKKEFHTLDDMEHMITMEPGNEQVIKKLVDWMAGTQKETPKKK KVKKNLRSADDKSAASSEASPTQSTSALTDLPKDKATQDQVSQEQPAEEQATEEQPVEEQ PIEEQPVEEQPIEEQPVEEQATEDQSAEEQDTQEQPTEEHDTQEQPAEEHDTQEQPTEEH DTQEHPAEEHDTQEQPTEEHDTQEHPAEEQDTQEQPAEEQDAQDQSAEEQDIQEQPAEEQ DIQEQPAEEQAIQDQSVEEQAAEEQAAEEQAAQDQAAQEQPDEEQALENEAA

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1220900412 TWMAGTQKET0.994unspPCHAS_1220900412 TWMAGTQKET0.994unspPCHAS_1220900412 TWMAGTQKET0.994unspPCHAS_1220900436 SKSAASSEAS0.996unspPCHAS_1220900462 SQDQVSQEQP0.995unspPCHAS_1220900506 STEDQSAEEQ0.997unspPCHAS_1220900586 SAQDQSAEEQ0.995unspPCHAS_1220900616 SIQDQSVEEQ0.994unspPCHAS_122090096 SVHKDSWIEE0.992unspPCHAS_1220900267 SSGMLSAKDV0.99unsp

PCHAS_122090      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India