PCHAS_1223100 | plasmepsin X, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1223100SP0.1695720.8303310.000097CS pos: 25-26. VTC-GK. Pr: 0.8430
No Results

  • Fasta :-

    >PCHAS_1223100 MKSVKIVPIFYLVAFFFHNYNEVTCGKVYTTGDNFMPCSECKDINKCGGCLFEHNESLPS AIELKLTKKNDNSIHDNLKIHHDSLKLGNVKYYVNRGEGVSGSLGHASGNDIRNMAEIHN EIKNRTEKKEKNKSSLSFIDRNNPEEGKGGNNLSKIQKHEQDEDKVNTQEKFEKVKSQTD KDASSSSGSAIDDNANKPGPSKGVTIEETSDNVFLVPLQHLRDSQFVGKLLVGTPPQEIH PIFDTGSTNLWVVTTECKEESCRKVHQYNPNKSKTFRRSFVNQNLHIVFGSGSISGTLGK DNFILGNHTIRNQIFGLVKSESSDNLNTSDNVFEYINFEGIVGLGFPGMLTAGNIPFFDN LLKQHENITPQFSFYISPNDESSTFIVGGINKSYYEGDIFMLPVIKEYYWEVKLDAIYIG DEKICCDEESYAIFDSGTSYNTIPSIQTDNFFKLIPSKPCNEENYNDILKDYPTIKYVFG KLVIELLPSEYMIVNDDLCAPAYMQIDVPSENNNAYLLGTIAFMRHYFTIFVRGQEGRPS MVGVAKAKRN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1223100.fa Sequence name : PCHAS_1223100 Sequence length : 550 VALUES OF COMPUTED PARAMETERS Coef20 : 4.061 CoefTot : -0.925 ChDiff : -13 ZoneTo : 21 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.612 1.694 0.167 0.652 MesoH : -0.307 0.290 -0.369 0.297 MuHd_075 : 14.684 8.051 5.006 2.635 MuHd_095 : 7.529 8.812 2.514 1.726 MuHd_100 : 16.117 13.095 5.324 3.512 MuHd_105 : 25.697 18.508 8.597 5.060 Hmax_075 : 17.733 19.600 3.247 7.303 Hmax_095 : 14.800 17.400 2.082 6.520 Hmax_100 : 19.200 20.300 3.558 7.760 Hmax_105 : 20.500 20.800 3.825 7.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9541 0.0459 DFMC : 0.9311 0.0689
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 550 PCHAS_1223100 MKSVKIVPIFYLVAFFFHNYNEVTCGKVYTTGDNFMPCSECKDINKCGGCLFEHNESLPSAIELKLTKKNDNSIHDNLKI 80 HHDSLKLGNVKYYVNRGEGVSGSLGHASGNDIRNMAEIHNEIKNRTEKKEKNKSSLSFIDRNNPEEGKGGNNLSKIQKHE 160 QDEDKVNTQEKFEKVKSQTDKDASSSSGSAIDDNANKPGPSKGVTIEETSDNVFLVPLQHLRDSQFVGKLLVGTPPQEIH 240 PIFDTGSTNLWVVTTECKEESCRKVHQYNPNKSKTFRRSFVNQNLHIVFGSGSISGTLGKDNFILGNHTIRNQIFGLVKS 320 ESSDNLNTSDNVFEYINFEGIVGLGFPGMLTAGNIPFFDNLLKQHENITPQFSFYISPNDESSTFIVGGINKSYYEGDIF 400 MLPVIKEYYWEVKLDAIYIGDEKICCDEESYAIFDSGTSYNTIPSIQTDNFFKLIPSKPCNEENYNDILKDYPTIKYVFG 480 KLVIELLPSEYMIVNDDLCAPAYMQIDVPSENNNAYLLGTIAFMRHYFTIFVRGQEGRPSMVGVAKAKRN 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1223100 2 -----MK|SV 0.114 . PCHAS_1223100 5 --MKSVK|IV 0.070 . PCHAS_1223100 27 NEVTCGK|VY 0.063 . PCHAS_1223100 42 MPCSECK|DI 0.098 . PCHAS_1223100 46 ECKDINK|CG 0.063 . PCHAS_1223100 65 PSAIELK|LT 0.065 . PCHAS_1223100 68 IELKLTK|KN 0.062 . PCHAS_1223100 69 ELKLTKK|ND 0.083 . PCHAS_1223100 79 SIHDNLK|IH 0.070 . PCHAS_1223100 86 IHHDSLK|LG 0.061 . PCHAS_1223100 91 LKLGNVK|YY 0.061 . PCHAS_1223100 96 VKYYVNR|GE 0.118 . PCHAS_1223100 113 ASGNDIR|NM 0.083 . PCHAS_1223100 123 EIHNEIK|NR 0.057 . PCHAS_1223100 125 HNEIKNR|TE 0.096 . PCHAS_1223100 128 IKNRTEK|KE 0.102 . PCHAS_1223100 129 KNRTEKK|EK 0.122 . PCHAS_1223100 131 RTEKKEK|NK 0.061 . PCHAS_1223100 133 EKKEKNK|SS 0.078 . PCHAS_1223100 141 SLSFIDR|NN 0.107 . PCHAS_1223100 148 NNPEEGK|GG 0.057 . PCHAS_1223100 155 GGNNLSK|IQ 0.071 . PCHAS_1223100 158 NLSKIQK|HE 0.072 . PCHAS_1223100 165 HEQDEDK|VN 0.068 . PCHAS_1223100 171 KVNTQEK|FE 0.068 . PCHAS_1223100 174 TQEKFEK|VK 0.072 . PCHAS_1223100 176 EKFEKVK|SQ 0.090 . PCHAS_1223100 181 VKSQTDK|DA 0.116 . PCHAS_1223100 197 IDDNANK|PG 0.059 . PCHAS_1223100 202 NKPGPSK|GV 0.091 . PCHAS_1223100 222 VPLQHLR|DS 0.095 . PCHAS_1223100 229 DSQFVGK|LL 0.068 . PCHAS_1223100 258 VVTTECK|EE 0.054 . PCHAS_1223100 263 CKEESCR|KV 0.147 . PCHAS_1223100 264 KEESCRK|VH 0.065 . PCHAS_1223100 272 HQYNPNK|SK 0.072 . PCHAS_1223100 274 YNPNKSK|TF 0.069 . PCHAS_1223100 277 NKSKTFR|RS 0.126 . PCHAS_1223100 278 KSKTFRR|SF 0.330 . PCHAS_1223100 300 ISGTLGK|DN 0.081 . PCHAS_1223100 311 LGNHTIR|NQ 0.092 . PCHAS_1223100 319 QIFGLVK|SE 0.067 . PCHAS_1223100 363 FFDNLLK|QH 0.068 . PCHAS_1223100 392 IVGGINK|SY 0.077 . PCHAS_1223100 406 FMLPVIK|EY 0.058 . PCHAS_1223100 413 EYYWEVK|LD 0.062 . PCHAS_1223100 423 IYIGDEK|IC 0.059 . PCHAS_1223100 453 QTDNFFK|LI 0.062 . PCHAS_1223100 458 FKLIPSK|PC 0.059 . PCHAS_1223100 470 NYNDILK|DY 0.069 . PCHAS_1223100 476 KDYPTIK|YV 0.106 . PCHAS_1223100 481 IKYVFGK|LV 0.112 . PCHAS_1223100 525 GTIAFMR|HY 0.107 . PCHAS_1223100 533 YFTIFVR|GQ 0.092 . PCHAS_1223100 538 VRGQEGR|PS 0.117 . PCHAS_1223100 546 SMVGVAK|AK 0.075 . PCHAS_1223100 548 VGVAKAK|RN 0.068 . PCHAS_1223100 549 GVAKAKR|N- 0.193 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1223100 ATGAAGAGTGTGAAAATAGTGCCCATATTTTATTTGGTGGCATTTTTTTTCCACAATTAT AATGAGGTAACATGTGGTAAAGTATACACAACTGGAGATAATTTTATGCCTTGTTCAGAA TGTAAGGATATAAATAAATGTGGTGGTTGTTTGTTTGAGCATAATGAGTCTTTACCTAGT GCAATAGAATTAAAATTGACAAAAAAAAATGATAACAGTATTCATGATAATTTAAAAATT CACCATGATTCATTAAAATTAGGAAATGTAAAATATTATGTAAACAGAGGAGAAGGTGTT TCAGGAAGTTTAGGGCATGCTTCAGGAAATGACATAAGAAATATGGCTGAAATTCATAAT GAAATAAAAAATAGAACAGAAAAAAAGGAAAAAAATAAATCATCTTTAAGTTTTATTGAT CGTAATAATCCAGAAGAAGGAAAAGGAGGTAATAATTTGTCAAAAATCCAAAAACATGAA CAAGATGAAGATAAGGTAAATACACAAGAAAAGTTTGAGAAAGTAAAAAGTCAAACTGAT AAAGATGCCAGTTCTTCTTCTGGTAGTGCTATAGATGATAATGCAAATAAACCGGGACCT TCTAAAGGCGTAACTATTGAAGAGACAAGTGATAATGTGTTTTTAGTTCCTTTACAACAT TTAAGAGATAGTCAGTTTGTGGGTAAATTATTAGTAGGTACACCTCCACAAGAAATTCAT CCAATTTTCGATACGGGTAGTACAAACTTATGGGTTGTTACAACGGAATGTAAAGAAGAA TCATGTAGAAAGGTACATCAATATAATCCGAATAAATCGAAAACATTTAGAAGATCTTTT GTAAATCAGAATTTACATATTGTTTTTGGATCAGGATCTATATCGGGTACATTAGGTAAA GACAATTTTATATTAGGTAACCATACAATACGCAATCAGATATTTGGATTAGTTAAAAGT GAATCTAGTGATAATTTAAATACTTCGGATAATGTTTTTGAATATATAAATTTTGAAGGT ATAGTAGGATTAGGTTTTCCTGGTATGTTAACTGCAGGAAATATTCCATTTTTTGACAAC TTATTAAAACAACATGAAAATATAACACCTCAATTTTCTTTTTATATATCTCCAAATGAT GAATCATCTACATTTATAGTTGGTGGTATAAACAAATCATATTACGAAGGGGATATATTT ATGTTACCTGTTATTAAAGAATATTATTGGGAAGTTAAATTAGATGCTATATATATAGGA GATGAGAAAATATGTTGTGATGAAGAAAGTTATGCAATATTTGATTCTGGAACATCTTAT AATACAATACCTAGTATTCAAACAGATAATTTTTTTAAGTTAATTCCATCAAAACCATGT AATGAAGAAAATTATAATGATATATTAAAAGATTATCCAACTATAAAATATGTTTTTGGA AAATTAGTAATTGAGTTGTTACCTAGTGAATATATGATTGTAAATGATGATTTATGTGCT CCAGCTTATATGCAAATAGATGTACCATCGGAAAATAATAATGCTTATCTTCTTGGTACC ATAGCCTTTATGCGACATTACTTTACAATTTTTGTAAGAGGGCAAGAAGGAAGACCATCT ATGGTTGGTGTGGCAAAAGCTAAGCGAAATTAA
  • Download Fasta

  • Fasta :-

    MKSVKIVPIFYLVAFFFHNYNEVTCGKVYTTGDNFMPCSECKDINKCGGCLFEHNESLPS AIELKLTKKNDNSIHDNLKIHHDSLKLGNVKYYVNRGEGVSGSLGHASGNDIRNMAEIHN EIKNRTEKKEKNKSSLSFIDRNNPEEGKGGNNLSKIQKHEQDEDKVNTQEKFEKVKSQTD KDASSSSGSAIDDNANKPGPSKGVTIEETSDNVFLVPLQHLRDSQFVGKLLVGTPPQEIH PIFDTGSTNLWVVTTECKEESCRKVHQYNPNKSKTFRRSFVNQNLHIVFGSGSISGTLGK DNFILGNHTIRNQIFGLVKSESSDNLNTSDNVFEYINFEGIVGLGFPGMLTAGNIPFFDN LLKQHENITPQFSFYISPNDESSTFIVGGINKSYYEGDIFMLPVIKEYYWEVKLDAIYIG DEKICCDEESYAIFDSGTSYNTIPSIQTDNFFKLIPSKPCNEENYNDILKDYPTIKYVFG KLVIELLPSEYMIVNDDLCAPAYMQIDVPSENNNAYLLGTIAFMRHYFTIFVRGQEGRPS MVGVAKAKRN

  • title: catalytic residue
  • coordinates: D244,D435
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1223100189 SSSSGSAIDD0.99unspPCHAS_1223100189 SSSSGSAIDD0.99unspPCHAS_1223100189 SSSSGSAIDD0.99unspPCHAS_1223100377 SSFYISPNDE0.993unspPCHAS_122310073 SKNDNSIHDN0.992unspPCHAS_1223100177 SEKVKSQTDK0.997unsp

PCHAS_122310      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India