PCHAS_1313400 | M17 leucyl aminopeptidase, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1313400OTHER0.9999160.0000790.000005
No Results

  • Fasta :-

    >PCHAS_1313400 MTSKVPQVNSLDPVVLPVNYTTPFDDVKVEVKDSGKEGCSFDDELILFLVHSSSEKEKGN LKISSQIKDSKINEFLSNNDDIFNGKIGTSTSFYISNEKNKYVNLTFIRCGGVDEEMGEY EIRTIVPSLVQVLHDKKPTSVSMIFEIDINESLFRFLLESVFYESTVDERFKSTNKAGNK NSSNSENMKNLQIFLKNHNNNYNKEVEKARIYSKGIYFAAQLISAPPNYCNPVSLANVAV ELAEKLNLEYKILGLKELEELKMGAYLSVGKGSMYPHRFIHLTYKGKGEIKKKIAFVGKG ITFDAGGYNLKAGPGSMIELMKFDMSGCAAVLGSAYCIGTIKPENVEVHFISAVCENMIS QNSYRPSDIITASNGKTIEVGNTDAEGRLTLADALVYAEKIGVDHIVDIATLTGAMLFSL GTSYAGVFGNDEKLINKILASSKSSNEPVWWLPIIKEYKKFISSRCADMNNTTTNSKASS IIASLFLNEFVQSTSWAHIDIAGAAWIFNDSKPKGFGVRLLSEYVLNHAI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1313400.fa Sequence name : PCHAS_1313400 Sequence length : 530 VALUES OF COMPUTED PARAMETERS Coef20 : 3.537 CoefTot : -0.309 ChDiff : -5 ZoneTo : 11 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.818 1.512 0.448 0.589 MesoH : -0.185 0.456 -0.246 0.290 MuHd_075 : 17.567 13.678 4.777 3.287 MuHd_095 : 12.152 8.335 2.947 0.460 MuHd_100 : 3.818 15.838 0.971 2.157 MuHd_105 : 6.152 21.217 2.511 3.987 Hmax_075 : 13.767 14.117 2.017 4.527 Hmax_095 : 7.700 11.300 0.734 3.190 Hmax_100 : 4.900 13.200 -0.438 3.360 Hmax_105 : 3.967 13.212 -1.021 3.316 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9450 0.0550 DFMC : 0.9332 0.0668
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 530 PCHAS_1313400 MTSKVPQVNSLDPVVLPVNYTTPFDDVKVEVKDSGKEGCSFDDELILFLVHSSSEKEKGNLKISSQIKDSKINEFLSNND 80 DIFNGKIGTSTSFYISNEKNKYVNLTFIRCGGVDEEMGEYEIRTIVPSLVQVLHDKKPTSVSMIFEIDINESLFRFLLES 160 VFYESTVDERFKSTNKAGNKNSSNSENMKNLQIFLKNHNNNYNKEVEKARIYSKGIYFAAQLISAPPNYCNPVSLANVAV 240 ELAEKLNLEYKILGLKELEELKMGAYLSVGKGSMYPHRFIHLTYKGKGEIKKKIAFVGKGITFDAGGYNLKAGPGSMIEL 320 MKFDMSGCAAVLGSAYCIGTIKPENVEVHFISAVCENMISQNSYRPSDIITASNGKTIEVGNTDAEGRLTLADALVYAEK 400 IGVDHIVDIATLTGAMLFSLGTSYAGVFGNDEKLINKILASSKSSNEPVWWLPIIKEYKKFISSRCADMNNTTTNSKASS 480 IIASLFLNEFVQSTSWAHIDIAGAAWIFNDSKPKGFGVRLLSEYVLNHAI 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1313400 4 ---MTSK|VP 0.054 . PCHAS_1313400 28 TPFDDVK|VE 0.055 . PCHAS_1313400 32 DVKVEVK|DS 0.091 . PCHAS_1313400 36 EVKDSGK|EG 0.058 . PCHAS_1313400 56 VHSSSEK|EK 0.070 . PCHAS_1313400 58 SSSEKEK|GN 0.090 . PCHAS_1313400 62 KEKGNLK|IS 0.066 . PCHAS_1313400 68 KISSQIK|DS 0.091 . PCHAS_1313400 71 SQIKDSK|IN 0.063 . PCHAS_1313400 86 DDIFNGK|IG 0.056 . PCHAS_1313400 99 FYISNEK|NK 0.056 . PCHAS_1313400 101 ISNEKNK|YV 0.091 . PCHAS_1313400 109 VNLTFIR|CG 0.093 . PCHAS_1313400 123 MGEYEIR|TI 0.108 . PCHAS_1313400 136 VQVLHDK|KP 0.060 . PCHAS_1313400 137 QVLHDKK|PT 0.091 . PCHAS_1313400 155 INESLFR|FL 0.102 . PCHAS_1313400 170 ESTVDER|FK 0.092 . PCHAS_1313400 172 TVDERFK|ST 0.097 . PCHAS_1313400 176 RFKSTNK|AG 0.055 . PCHAS_1313400 180 TNKAGNK|NS 0.078 . PCHAS_1313400 189 SNSENMK|NL 0.080 . PCHAS_1313400 196 NLQIFLK|NH 0.060 . PCHAS_1313400 204 HNNNYNK|EV 0.107 . PCHAS_1313400 208 YNKEVEK|AR 0.062 . PCHAS_1313400 210 KEVEKAR|IY 0.143 . PCHAS_1313400 214 KARIYSK|GI 0.072 . PCHAS_1313400 245 AVELAEK|LN 0.051 . PCHAS_1313400 251 KLNLEYK|IL 0.079 . PCHAS_1313400 256 YKILGLK|EL 0.058 . PCHAS_1313400 262 KELEELK|MG 0.052 . PCHAS_1313400 271 AYLSVGK|GS 0.056 . PCHAS_1313400 278 GSMYPHR|FI 0.134 . PCHAS_1313400 285 FIHLTYK|GK 0.081 . PCHAS_1313400 287 HLTYKGK|GE 0.068 . PCHAS_1313400 291 KGKGEIK|KK 0.061 . PCHAS_1313400 292 GKGEIKK|KI 0.128 . PCHAS_1313400 293 KGEIKKK|IA 0.139 . PCHAS_1313400 299 KIAFVGK|GI 0.075 . PCHAS_1313400 311 AGGYNLK|AG 0.058 . PCHAS_1313400 322 SMIELMK|FD 0.071 . PCHAS_1313400 342 YCIGTIK|PE 0.061 . PCHAS_1313400 365 ISQNSYR|PS 0.138 . PCHAS_1313400 376 ITASNGK|TI 0.070 . PCHAS_1313400 388 NTDAEGR|LT 0.071 . PCHAS_1313400 400 ALVYAEK|IG 0.060 . PCHAS_1313400 433 VFGNDEK|LI 0.069 . PCHAS_1313400 437 DEKLINK|IL 0.057 . PCHAS_1313400 443 KILASSK|SS 0.072 . PCHAS_1313400 456 WWLPIIK|EY 0.058 . PCHAS_1313400 459 PIIKEYK|KF 0.062 . PCHAS_1313400 460 IIKEYKK|FI 0.110 . PCHAS_1313400 465 KKFISSR|CA 0.159 . PCHAS_1313400 477 NTTTNSK|AS 0.062 . PCHAS_1313400 512 WIFNDSK|PK 0.068 . PCHAS_1313400 514 FNDSKPK|GF 0.079 . PCHAS_1313400 519 PKGFGVR|LL 0.099 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1313400 ATGACATCTAAAGTTCCACAAGTAAATAGTCTTGATCCAGTAGTCTTACCCGTAAACTAT ACGACCCCATTCGATGATGTAAAAGTCGAAGTAAAAGATTCTGGAAAAGAAGGTTGCTCT TTTGATGACGAATTAATATTATTTTTAGTTCATTCTTCATCTGAAAAAGAGAAAGGAAAT TTAAAAATAAGCTCACAGATTAAGGATAGCAAAATAAACGAGTTTTTATCAAATAATGAT GATATTTTTAATGGAAAAATAGGAACATCAACAAGTTTTTATATATCTAATGAAAAGAAC AAATACGTAAATTTAACTTTTATTAGATGTGGAGGAGTTGATGAAGAAATGGGTGAATAT GAAATTAGAACAATAGTACCTAGTTTAGTTCAAGTATTACATGATAAAAAGCCTACATCT GTATCTATGATTTTTGAAATAGATATCAATGAATCTTTATTTAGATTCCTTTTAGAAAGT GTTTTTTATGAATCTACAGTTGATGAAAGATTCAAATCTACCAATAAGGCTGGTAACAAG AATTCTTCAAACTCAGAAAATATGAAAAATTTACAAATATTTTTAAAAAACCATAACAAC AATTATAATAAAGAAGTTGAGAAAGCCCGAATATATTCTAAGGGTATATATTTTGCAGCA CAACTTATTTCAGCTCCACCAAACTATTGCAATCCTGTCTCTTTAGCAAATGTAGCTGTT GAGTTAGCTGAAAAATTAAACTTAGAATACAAAATCTTAGGATTAAAAGAACTTGAAGAA TTAAAAATGGGAGCATATTTATCAGTAGGAAAAGGTAGTATGTATCCACATCGATTTATT CATTTAACTTATAAAGGAAAAGGTGAAATTAAAAAGAAAATTGCATTCGTTGGTAAAGGT ATTACATTTGATGCAGGAGGATATAATTTAAAGGCTGGTCCCGGATCTATGATTGAATTA ATGAAATTTGACATGAGTGGTTGTGCAGCTGTTTTAGGTTCTGCTTATTGCATTGGAACT ATAAAACCAGAAAATGTTGAAGTTCATTTTATAAGTGCAGTATGTGAAAATATGATTTCA CAAAATTCATATCGACCTAGTGATATTATAACTGCATCTAATGGAAAAACTATTGAAGTA GGAAATACAGATGCAGAAGGAAGATTAACATTAGCAGATGCATTAGTATATGCTGAAAAA ATTGGTGTTGATCATATTGTTGATATAGCTACATTAACAGGTGCTATGTTATTTTCATTA GGTACAAGTTATGCTGGTGTTTTTGGAAATGATGAAAAACTAATTAATAAAATATTAGCA TCATCAAAAAGTTCTAATGAACCAGTATGGTGGTTACCAATTATTAAAGAATATAAAAAA TTTATAAGTTCAAGATGTGCAGATATGAATAATACAACTACAAATAGCAAAGCATCCTCT ATTATTGCATCTTTATTTTTGAACGAATTTGTACAATCAACATCATGGGCACATATAGAT ATTGCCGGAGCTGCATGGATTTTTAATGATAGCAAACCAAAAGGTTTTGGTGTTAGACTT TTATCTGAATATGTATTAAATCACGCTATCTAA
  • Download Fasta

  • Fasta :-

    MTSKVPQVNSLDPVVLPVNYTTPFDDVKVEVKDSGKEGCSFDDELILFLVHSSSEKEKGN LKISSQIKDSKINEFLSNNDDIFNGKIGTSTSFYISNEKNKYVNLTFIRCGGVDEEMGEY EIRTIVPSLVQVLHDKKPTSVSMIFEIDINESLFRFLLESVFYESTVDERFKSTNKAGNK NSSNSENMKNLQIFLKNHNNNYNKEVEKARIYSKGIYFAAQLISAPPNYCNPVSLANVAV ELAEKLNLEYKILGLKELEELKMGAYLSVGKGSMYPHRFIHLTYKGKGEIKKKIAFVGKG ITFDAGGYNLKAGPGSMIELMKFDMSGCAAVLGSAYCIGTIKPENVEVHFISAVCENMIS QNSYRPSDIITASNGKTIEVGNTDAEGRLTLADALVYAEKIGVDHIVDIATLTGAMLFSL GTSYAGVFGNDEKLINKILASSKSSNEPVWWLPIIKEYKKFISSRCADMNNTTTNSKASS IIASLFLNEFVQSTSWAHIDIAGAAWIFNDSKPKGFGVRLLSEYVLNHAI

  • title: Substrate-binding/catalytic site
  • coordinates: K299,D304,K311,D324,D384,E386,R388,L412
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1313400102 YEKNKYVNLT0.99unspPCHAS_1313400102 YEKNKYVNLT0.99unspPCHAS_1313400102 YEKNKYVNLT0.99unspPCHAS_1313400140 SKKPTSVSMI0.992unspPCHAS_1313400165 SVFYESTVDE0.995unspPCHAS_1313400363 SISQNSYRPS0.992unspPCHAS_131340034 SEVKDSGKEG0.997unspPCHAS_131340054 SVHSSSEKEK0.993unsp

PCHAS_131340      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India