PCHAS_1319300 | DER1-like protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0020011      

  • Curated_GO_Components:  apicoplast      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:  ubiquitin-dependent ERAD pathway      

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1319300SP0.0125460.9873450.000110CS pos: 18-19. ING-IQ. Pr: 0.8195
No Results

  • Fasta :-

    >PCHAS_1319300 MKMCIFFYVLLFFIYINGIQDVRVECRKEYHIKKIPNGITNKLIYNEIRGKNSNSINSVI YKRNILFHIRIPKKTLQGRNLFSNDIRNKKINEFLQKKKNSCYLHINSDVNEIKKKRDKL LKDVLLNAKQLQEYINNLKSTLLHKYKDTKIITKFFLSTSFLVMVLNLFGLRPEDIALHD KRIIRAFEFYRIITSALFYGDISLYVLTNIYMLYLQSQELEKSVGSSEALAFYLSQITIL STICSFMKKPFYSTALLKSLLFTNCMLNPYNKSNLIFGINIYNMYLPYLSIVIDILHAQD FNASLSGILGVISGAIYYFSNIYLLEKCNTKFFKIPQILRNYLDSFNTDEFVF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1319300.fa Sequence name : PCHAS_1319300 Sequence length : 353 VALUES OF COMPUTED PARAMETERS Coef20 : 4.261 CoefTot : -0.722 ChDiff : 21 ZoneTo : 20 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.118 2.288 0.406 0.874 MesoH : 0.402 0.792 -0.140 0.409 MuHd_075 : 13.649 15.824 7.641 3.793 MuHd_095 : 12.420 5.760 5.814 2.288 MuHd_100 : 7.781 3.477 4.856 1.400 MuHd_105 : 6.707 8.075 3.160 2.646 Hmax_075 : 18.600 23.600 6.223 7.887 Hmax_095 : 17.500 21.700 5.481 7.050 Hmax_100 : 18.800 19.800 4.746 7.020 Hmax_105 : 15.600 27.183 5.236 8.983 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9766 0.0234 DFMC : 0.9801 0.0199
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 353 PCHAS_1319300 MKMCIFFYVLLFFIYINGIQDVRVECRKEYHIKKIPNGITNKLIYNEIRGKNSNSINSVIYKRNILFHIRIPKKTLQGRN 80 LFSNDIRNKKINEFLQKKKNSCYLHINSDVNEIKKKRDKLLKDVLLNAKQLQEYINNLKSTLLHKYKDTKIITKFFLSTS 160 FLVMVLNLFGLRPEDIALHDKRIIRAFEFYRIITSALFYGDISLYVLTNIYMLYLQSQELEKSVGSSEALAFYLSQITIL 240 STICSFMKKPFYSTALLKSLLFTNCMLNPYNKSNLIFGINIYNMYLPYLSIVIDILHAQDFNASLSGILGVISGAIYYFS 320 NIYLLEKCNTKFFKIPQILRNYLDSFNTDEFVF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1319300 2 -----MK|MC 0.060 . PCHAS_1319300 23 NGIQDVR|VE 0.071 . PCHAS_1319300 27 DVRVECR|KE 0.086 . PCHAS_1319300 28 VRVECRK|EY 0.088 . PCHAS_1319300 33 RKEYHIK|KI 0.084 . PCHAS_1319300 34 KEYHIKK|IP 0.098 . PCHAS_1319300 42 PNGITNK|LI 0.066 . PCHAS_1319300 49 LIYNEIR|GK 0.083 . PCHAS_1319300 51 YNEIRGK|NS 0.062 . PCHAS_1319300 62 INSVIYK|RN 0.063 . PCHAS_1319300 63 NSVIYKR|NI 0.149 . PCHAS_1319300 70 NILFHIR|IP 0.077 . PCHAS_1319300 73 FHIRIPK|KT 0.146 . PCHAS_1319300 74 HIRIPKK|TL 0.089 . PCHAS_1319300 79 KKTLQGR|NL 0.082 . PCHAS_1319300 87 LFSNDIR|NK 0.098 . PCHAS_1319300 89 SNDIRNK|KI 0.066 . PCHAS_1319300 90 NDIRNKK|IN 0.221 . PCHAS_1319300 97 INEFLQK|KK 0.063 . PCHAS_1319300 98 NEFLQKK|KN 0.098 . PCHAS_1319300 99 EFLQKKK|NS 0.079 . PCHAS_1319300 114 SDVNEIK|KK 0.067 . PCHAS_1319300 115 DVNEIKK|KR 0.095 . PCHAS_1319300 116 VNEIKKK|RD 0.079 . PCHAS_1319300 117 NEIKKKR|DK 0.176 . PCHAS_1319300 119 IKKKRDK|LL 0.071 . PCHAS_1319300 122 KRDKLLK|DV 0.087 . PCHAS_1319300 129 DVLLNAK|QL 0.061 . PCHAS_1319300 139 EYINNLK|ST 0.059 . PCHAS_1319300 145 KSTLLHK|YK 0.072 . PCHAS_1319300 147 TLLHKYK|DT 0.100 . PCHAS_1319300 150 HKYKDTK|II 0.074 . PCHAS_1319300 154 DTKIITK|FF 0.056 . PCHAS_1319300 172 LNLFGLR|PE 0.081 . PCHAS_1319300 181 DIALHDK|RI 0.066 . PCHAS_1319300 182 IALHDKR|II 0.227 . PCHAS_1319300 185 HDKRIIR|AF 0.259 . PCHAS_1319300 191 RAFEFYR|II 0.106 . PCHAS_1319300 222 QSQELEK|SV 0.147 . PCHAS_1319300 248 TICSFMK|KP 0.064 . PCHAS_1319300 249 ICSFMKK|PF 0.091 . PCHAS_1319300 258 YSTALLK|SL 0.069 . PCHAS_1319300 272 MLNPYNK|SN 0.079 . PCHAS_1319300 327 NIYLLEK|CN 0.059 . PCHAS_1319300 331 LEKCNTK|FF 0.059 . PCHAS_1319300 334 CNTKFFK|IP 0.066 . PCHAS_1319300 340 KIPQILR|NY 0.083 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1319300 ATGAAAATGTGTATTTTTTTTTACGTGTTATTATTTTTTATATACATCAATGGGATACAA GATGTTCGCGTTGAATGCAGAAAAGAATATCATATAAAGAAAATACCCAATGGCATTACG AATAAGTTAATATATAATGAAATTAGGGGAAAAAATTCAAACAGTATAAACAGCGTAATT TATAAAAGAAATATTCTTTTCCATATAAGAATCCCCAAAAAAACGCTTCAAGGACGCAAT TTATTTAGTAATGATATTCGAAATAAAAAAATCAATGAATTTCTGCAAAAAAAAAAAAAT TCATGTTACCTACACATAAATAGTGATGTTAATGAAATTAAAAAAAAGAGAGATAAACTC CTAAAAGATGTTTTATTAAACGCTAAGCAATTACAAGAATATATTAATAATTTAAAATCA ACATTACTTCATAAATATAAAGATACAAAAATTATAACAAAATTTTTTTTATCAACATCT TTTCTAGTTATGGTACTTAATTTATTTGGTTTAAGACCTGAAGATATTGCATTACACGAT AAGAGAATTATAAGAGCTTTTGAGTTTTATAGAATTATAACATCTGCTTTGTTTTATGGC GACATTTCATTATATGTATTAACAAATATTTATATGCTTTATTTACAAAGCCAAGAGTTA GAAAAATCTGTAGGATCATCAGAAGCCCTTGCTTTTTATTTATCACAAATTACGATATTA TCTACTATTTGTTCTTTTATGAAGAAGCCATTTTATTCAACAGCGTTGTTAAAATCTTTA TTATTTACAAATTGTATGCTAAACCCATATAATAAATCGAACTTAATATTTGGTATAAAT ATATACAATATGTATTTGCCTTATTTATCAATTGTTATTGATATTTTGCATGCTCAAGAT TTTAACGCTTCCTTATCTGGAATATTGGGTGTAATAAGTGGAGCTATTTATTATTTTTCA AATATTTATTTATTGGAAAAATGCAATACAAAATTTTTTAAAATTCCCCAAATATTAAGG AATTACCTTGATTCATTCAATACTGATGAATTTGTTTTTTAA
  • Download Fasta

  • Fasta :-

    MKMCIFFYVLLFFIYINGIQDVRVECRKEYHIKKIPNGITNKLIYNEIRGKNSNSINSVI YKRNILFHIRIPKKTLQGRNLFSNDIRNKKINEFLQKKKNSCYLHINSDVNEIKKKRDKL LKDVLLNAKQLQEYINNLKSTLLHKYKDTKIITKFFLSTSFLVMVLNLFGLRPEDIALHD KRIIRAFEFYRIITSALFYGDISLYVLTNIYMLYLQSQELEKSVGSSEALAFYLSQITIL STICSFMKKPFYSTALLKSLLFTNCMLNPYNKSNLIFGINIYNMYLPYLSIVIDILHAQD FNASLSGILGVISGAIYYFSNIYLLEKCNTKFFKIPQILRNYLDSFNTDEFVF

    No Results
No Results
No Results
No Results

PCHAS_131930      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India