PCHAS_1321400 | aminopeptidase P, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1321400SP0.0842620.8759180.039820CS pos: 18-19. IHA-NF. Pr: 0.9661
No Results

  • Fasta :-

    >PCHAS_1321400 MRINSLIYANLLFTAIHANFFTKGNKANYVSAYINTLHRHNNNDNKHNTEDSNKINVTNT GKSQDQLNNYFSRRFYTIQNKNQYLREGKRSSTDDNLTNYNMESSNEQNNQMMGGDSYKE RLQKLKKYMGDHNIDVYILINSDAHNSEIINDQDKKIYYLTNYSGADGILILTKDQQIIY VNALYELQATKELDTKFFDLKIGRITNKDEIFQTIADLEFNTIAFDGKNTSVSFYEKLKN KLKFQYPDKQIQEKFIYKDSINKIVKDKNINLYVLESPLVTVPNDNVNKKPVFIYDREFG GACAAQKIQEASDFFDENPDVDSMLLSELDEIAYLLNLRGYDYVYSPLFYSYVYLKYNRE KGRIDEIILFAKTENIKENVLAHLDRIHVKLMDYDSVVSFLTKNVSTKTANITRYNENNL LLSSLQGNSNPRYDISLSPHINLMVYMLFNKEKVLLKKSPIVDMKAVKNYVEMDSIKEAH VLDGLALLQFFHWCDEKRKTKELFKETEISLRNKIDYFRSTKKNFIFPSFSTISAIGPNS AVIHYESTEETNAKITPSIYLLDSGGQYLYGTTDVTRTTHFGEPNADEKKLYTLVLKGHL SLRKVIFASYTNSMALDFLARQPLYNHFLDYNHGTGHGVGICLNVHEGGCSISPAAGTPL KESMVLSNEPGYYWADHFGIRIENMQFVVTKKQTDDTTFLTFNDLTLYPYEKKLLDYSLL TPQEIADINEYHLTIRNTLLPRIKENPSEYDKGVEQYLMEITEPISH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1321400.fa Sequence name : PCHAS_1321400 Sequence length : 767 VALUES OF COMPUTED PARAMETERS Coef20 : 4.545 CoefTot : -1.183 ChDiff : -9 ZoneTo : 43 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.353 1.253 0.102 0.574 MesoH : -0.321 0.199 -0.352 0.223 MuHd_075 : 23.028 23.097 7.050 6.874 MuHd_095 : 18.809 14.327 5.300 5.282 MuHd_100 : 20.262 18.099 5.603 5.872 MuHd_105 : 29.125 23.191 8.670 7.149 Hmax_075 : 14.437 26.000 1.720 5.994 Hmax_095 : 14.525 13.100 0.974 5.950 Hmax_100 : 2.900 6.800 -1.714 2.860 Hmax_105 : 6.883 11.667 0.554 3.803 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1969 0.8031 DFMC : 0.1802 0.8198 This protein is probably imported in mitochondria. f(Ser) = 0.0465 f(Arg) = 0.0465 CMi = 0.34423 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 767 PCHAS_1321400 MRINSLIYANLLFTAIHANFFTKGNKANYVSAYINTLHRHNNNDNKHNTEDSNKINVTNTGKSQDQLNNYFSRRFYTIQN 80 KNQYLREGKRSSTDDNLTNYNMESSNEQNNQMMGGDSYKERLQKLKKYMGDHNIDVYILINSDAHNSEIINDQDKKIYYL 160 TNYSGADGILILTKDQQIIYVNALYELQATKELDTKFFDLKIGRITNKDEIFQTIADLEFNTIAFDGKNTSVSFYEKLKN 240 KLKFQYPDKQIQEKFIYKDSINKIVKDKNINLYVLESPLVTVPNDNVNKKPVFIYDREFGGACAAQKIQEASDFFDENPD 320 VDSMLLSELDEIAYLLNLRGYDYVYSPLFYSYVYLKYNREKGRIDEIILFAKTENIKENVLAHLDRIHVKLMDYDSVVSF 400 LTKNVSTKTANITRYNENNLLLSSLQGNSNPRYDISLSPHINLMVYMLFNKEKVLLKKSPIVDMKAVKNYVEMDSIKEAH 480 VLDGLALLQFFHWCDEKRKTKELFKETEISLRNKIDYFRSTKKNFIFPSFSTISAIGPNSAVIHYESTEETNAKITPSIY 560 LLDSGGQYLYGTTDVTRTTHFGEPNADEKKLYTLVLKGHLSLRKVIFASYTNSMALDFLARQPLYNHFLDYNHGTGHGVG 640 ICLNVHEGGCSISPAAGTPLKESMVLSNEPGYYWADHFGIRIENMQFVVTKKQTDDTTFLTFNDLTLYPYEKKLLDYSLL 720 TPQEIADINEYHLTIRNTLLPRIKENPSEYDKGVEQYLMEITEPISH 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1321400 2 -----MR|IN 0.094 . PCHAS_1321400 23 HANFFTK|GN 0.081 . PCHAS_1321400 26 FFTKGNK|AN 0.055 . PCHAS_1321400 39 YINTLHR|HN 0.082 . PCHAS_1321400 46 HNNNDNK|HN 0.067 . PCHAS_1321400 54 NTEDSNK|IN 0.058 . PCHAS_1321400 62 NVTNTGK|SQ 0.074 . PCHAS_1321400 73 LNNYFSR|RF 0.111 . PCHAS_1321400 74 NNYFSRR|FY 0.223 . PCHAS_1321400 81 FYTIQNK|NQ 0.053 . PCHAS_1321400 86 NKNQYLR|EG 0.077 . PCHAS_1321400 89 QYLREGK|RS 0.104 . PCHAS_1321400 90 YLREGKR|SS 0.239 . PCHAS_1321400 119 MGGDSYK|ER 0.066 . PCHAS_1321400 121 GDSYKER|LQ 0.106 . PCHAS_1321400 124 YKERLQK|LK 0.124 . PCHAS_1321400 126 ERLQKLK|KY 0.064 . PCHAS_1321400 127 RLQKLKK|YM 0.145 . PCHAS_1321400 155 IINDQDK|KI 0.066 . PCHAS_1321400 156 INDQDKK|IY 0.078 . PCHAS_1321400 174 GILILTK|DQ 0.067 . PCHAS_1321400 191 YELQATK|EL 0.067 . PCHAS_1321400 196 TKELDTK|FF 0.071 . PCHAS_1321400 201 TKFFDLK|IG 0.061 . PCHAS_1321400 204 FDLKIGR|IT 0.083 . PCHAS_1321400 208 IGRITNK|DE 0.070 . PCHAS_1321400 228 TIAFDGK|NT 0.077 . PCHAS_1321400 237 SVSFYEK|LK 0.067 . PCHAS_1321400 239 SFYEKLK|NK 0.057 . PCHAS_1321400 241 YEKLKNK|LK 0.065 . PCHAS_1321400 243 KLKNKLK|FQ 0.066 . PCHAS_1321400 249 KFQYPDK|QI 0.068 . PCHAS_1321400 254 DKQIQEK|FI 0.073 . PCHAS_1321400 258 QEKFIYK|DS 0.068 . PCHAS_1321400 263 YKDSINK|IV 0.066 . PCHAS_1321400 266 SINKIVK|DK 0.079 . PCHAS_1321400 268 NKIVKDK|NI 0.068 . PCHAS_1321400 289 PNDNVNK|KP 0.056 . PCHAS_1321400 290 NDNVNKK|PV 0.182 . PCHAS_1321400 297 PVFIYDR|EF 0.089 . PCHAS_1321400 307 GACAAQK|IQ 0.065 . PCHAS_1321400 339 AYLLNLR|GY 0.072 . PCHAS_1321400 356 YSYVYLK|YN 0.068 . PCHAS_1321400 359 VYLKYNR|EK 0.079 . PCHAS_1321400 361 LKYNREK|GR 0.073 . PCHAS_1321400 363 YNREKGR|ID 0.143 . PCHAS_1321400 372 EIILFAK|TE 0.065 . PCHAS_1321400 377 AKTENIK|EN 0.054 . PCHAS_1321400 386 VLAHLDR|IH 0.082 . PCHAS_1321400 390 LDRIHVK|LM 0.064 . PCHAS_1321400 403 VVSFLTK|NV 0.097 . PCHAS_1321400 408 TKNVSTK|TA 0.091 . PCHAS_1321400 414 KTANITR|YN 0.109 . PCHAS_1321400 432 QGNSNPR|YD 0.089 . PCHAS_1321400 451 VYMLFNK|EK 0.053 . PCHAS_1321400 453 MLFNKEK|VL 0.069 . PCHAS_1321400 457 KEKVLLK|KS 0.059 . PCHAS_1321400 458 EKVLLKK|SP 0.117 . PCHAS_1321400 465 SPIVDMK|AV 0.096 . PCHAS_1321400 468 VDMKAVK|NY 0.058 . PCHAS_1321400 477 VEMDSIK|EA 0.071 . PCHAS_1321400 497 FHWCDEK|RK 0.058 . PCHAS_1321400 498 HWCDEKR|KT 0.176 . PCHAS_1321400 499 WCDEKRK|TK 0.077 . PCHAS_1321400 501 DEKRKTK|EL 0.163 . PCHAS_1321400 505 KTKELFK|ET 0.071 . PCHAS_1321400 512 ETEISLR|NK 0.088 . PCHAS_1321400 514 EISLRNK|ID 0.058 . PCHAS_1321400 519 NKIDYFR|ST 0.133 . PCHAS_1321400 522 DYFRSTK|KN 0.094 . PCHAS_1321400 523 YFRSTKK|NF 0.075 . PCHAS_1321400 554 TEETNAK|IT 0.065 . PCHAS_1321400 577 GTTDVTR|TT 0.107 . PCHAS_1321400 589 EPNADEK|KL 0.065 . PCHAS_1321400 590 PNADEKK|LY 0.098 . PCHAS_1321400 597 LYTLVLK|GH 0.055 . PCHAS_1321400 603 KGHLSLR|KV 0.113 . PCHAS_1321400 604 GHLSLRK|VI 0.079 . PCHAS_1321400 621 ALDFLAR|QP 0.067 . PCHAS_1321400 661 AAGTPLK|ES 0.057 . PCHAS_1321400 681 ADHFGIR|IE 0.084 . PCHAS_1321400 691 MQFVVTK|KQ 0.069 . PCHAS_1321400 692 QFVVTKK|QT 0.117 . PCHAS_1321400 712 TLYPYEK|KL 0.058 . PCHAS_1321400 713 LYPYEKK|LL 0.093 . PCHAS_1321400 736 EYHLTIR|NT 0.068 . PCHAS_1321400 742 RNTLLPR|IK 0.069 . PCHAS_1321400 744 TLLPRIK|EN 0.059 . PCHAS_1321400 752 NPSEYDK|GV 0.130 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1321400 ATGCGTATAAATTCGCTTATATATGCTAATTTGTTGTTTACGGCTATCCATGCAAATTTC TTTACCAAAGGAAATAAGGCAAATTACGTATCAGCTTATATAAACACACTCCATCGTCAT AATAATAATGATAACAAGCACAATACAGAAGATAGCAACAAAATAAATGTTACTAACACA GGAAAATCTCAAGACCAATTAAACAACTATTTTTCTAGAAGATTTTATACTATTCAAAAC AAAAATCAATATTTAAGAGAAGGAAAGAGGAGCTCAACGGACGATAATTTAACCAACTAC AATATGGAATCTTCTAATGAACAAAACAATCAAATGATGGGTGGGGATTCGTATAAAGAG AGACTTCAAAAGTTGAAAAAATATATGGGTGATCATAATATTGATGTTTATATCCTAATA AATAGTGATGCACACAATTCTGAAATTATAAATGATCAAGATAAAAAAATTTATTATCTA ACTAATTATAGTGGTGCTGATGGAATATTAATATTAACAAAAGACCAACAAATAATATAT GTAAATGCTTTATATGAATTACAAGCTACTAAAGAATTAGATACAAAATTCTTTGATCTT AAAATTGGTAGAATAACAAACAAAGATGAAATTTTTCAAACAATTGCTGATCTTGAATTT AATACTATTGCTTTTGATGGAAAAAATACAAGCGTTTCTTTTTATGAAAAACTAAAAAAT AAATTAAAATTTCAATACCCTGATAAACAAATTCAAGAAAAATTCATATATAAAGATTCT ATTAATAAAATTGTTAAAGATAAAAATATTAATTTATATGTATTAGAATCACCATTAGTT ACTGTACCAAACGATAATGTAAATAAAAAGCCAGTATTTATATATGATAGAGAATTTGGT GGCGCTTGTGCTGCACAAAAAATTCAAGAAGCTTCTGATTTTTTTGACGAAAACCCTGAT GTAGATTCTATGCTACTTTCTGAACTCGATGAAATAGCTTACTTGTTAAATTTAAGAGGT TATGATTACGTATACTCTCCTTTATTTTATTCCTACGTATATCTTAAATACAATAGAGAG AAAGGGAGAATTGATGAAATCATTTTATTCGCTAAAACTGAAAATATTAAAGAAAATGTA TTGGCCCATTTAGATAGAATACATGTAAAGCTTATGGATTATGACTCCGTTGTTTCATTT TTAACAAAAAATGTCTCAACCAAAACCGCAAACATCACAAGGTATAATGAAAATAACCTT CTTCTAAGCAGCTTACAGGGAAATAGCAATCCACGATATGATATATCTCTAAGTCCACAT ATCAACTTAATGGTATATATGCTTTTTAACAAAGAAAAAGTTTTATTGAAAAAATCACCA ATTGTAGATATGAAAGCAGTTAAAAATTATGTAGAAATGGACAGCATTAAAGAAGCTCAT GTTTTAGATGGTTTAGCTTTATTACAATTTTTCCACTGGTGTGATGAGAAAAGAAAAACT AAAGAATTATTTAAGGAAACAGAAATATCTTTAAGAAACAAAATCGACTATTTTAGATCA ACCAAAAAGAATTTTATATTCCCATCTTTCTCAACTATATCAGCTATAGGTCCTAACTCT GCTGTTATTCATTATGAATCTACAGAAGAAACTAATGCTAAAATCACACCAAGTATTTAT TTACTAGACTCTGGAGGACAATATTTATATGGAACAACAGACGTAACAAGAACAACCCAT TTTGGTGAACCAAATGCTGATGAAAAAAAATTATATACCTTAGTTTTAAAAGGACATTTA AGCTTAAGAAAAGTTATCTTTGCTAGCTATACTAATTCAATGGCTTTAGATTTCTTAGCA CGTCAACCATTATATAATCATTTTCTAGATTATAATCATGGAACTGGTCATGGTGTTGGT ATATGCCTAAATGTACATGAAGGTGGATGCTCTATTTCCCCAGCTGCTGGAACACCATTA AAAGAAAGTATGGTACTTTCTAATGAACCAGGATATTATTGGGCAGACCACTTTGGTATT AGAATTGAAAATATGCAATTTGTAGTCACTAAAAAACAAACAGATGATACCACATTTTTA ACTTTTAATGATTTAACGCTTTACCCATATGAAAAGAAATTATTAGACTATTCTTTATTA ACCCCTCAAGAAATTGCAGATATTAACGAATACCACTTAACAATTAGAAATACTTTATTA CCAAGAATCAAAGAAAATCCATCAGAATATGATAAAGGAGTAGAACAATATTTGATGGAA ATAACCGAACCAATTTCACATTAA
  • Download Fasta

  • Fasta :-

    MRINSLIYANLLFTAIHANFFTKGNKANYVSAYINTLHRHNNNDNKHNTEDSNKINVTNT GKSQDQLNNYFSRRFYTIQNKNQYLREGKRSSTDDNLTNYNMESSNEQNNQMMGGDSYKE RLQKLKKYMGDHNIDVYILINSDAHNSEIINDQDKKIYYLTNYSGADGILILTKDQQIIY VNALYELQATKELDTKFFDLKIGRITNKDEIFQTIADLEFNTIAFDGKNTSVSFYEKLKN KLKFQYPDKQIQEKFIYKDSINKIVKDKNINLYVLESPLVTVPNDNVNKKPVFIYDREFG GACAAQKIQEASDFFDENPDVDSMLLSELDEIAYLLNLRGYDYVYSPLFYSYVYLKYNRE KGRIDEIILFAKTENIKENVLAHLDRIHVKLMDYDSVVSFLTKNVSTKTANITRYNENNL LLSSLQGNSNPRYDISLSPHINLMVYMLFNKEKVLLKKSPIVDMKAVKNYVEMDSIKEAH VLDGLALLQFFHWCDEKRKTKELFKETEISLRNKIDYFRSTKKNFIFPSFSTISAIGPNS AVIHYESTEETNAKITPSIYLLDSGGQYLYGTTDVTRTTHFGEPNADEKKLYTLVLKGHL SLRKVIFASYTNSMALDFLARQPLYNHFLDYNHGTGHGVGICLNVHEGGCSISPAAGTPL KESMVLSNEPGYYWADHFGIRIENMQFVVTKKQTDDTTFLTFNDLTLYPYEKKLLDYSLL TPQEIADINEYHLTIRNTLLPRIKENPSEYDKGVEQYLMEITEPISH

  • title: active site
  • coordinates: H544,D563,D574,I641,E669,E683
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1321400117 SMGGDSYKER0.995unspPCHAS_1321400117 SMGGDSYKER0.995unspPCHAS_1321400117 SMGGDSYKER0.995unspPCHAS_1321400475 SVEMDSIKEA0.995unspPCHAS_1321400547 SIHYESTEET0.99unspPCHAS_1321400748 SKENPSEYDK0.996unspPCHAS_132140091 SEGKRSSTDD0.994unspPCHAS_132140092 SGKRSSTDDN0.998unsp

PCHAS_132140      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India