PCHAS_1325000 | chabaupain 1

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1325000OTHER0.9959430.0000770.003981
No Results

  • Fasta :-

    >PCHAS_1325000 MMNDIRRINFTTTGIDSLNENGTYSKGNHKKTIKICAYAITAIALFFIGGVYFKYQTDRN ALNAIDEAELMNKEIAHLREILKKYKATTNDDNEFEYPTNDDMNEDSEDGEHQLLLMLHK LLKNNANKVNTFGINNESNTNTDNTYIFTQKLESMQDNIKYASKFFKYMKKYNKKYENMD EQLERFENFKISHMKVKKHNEMIGKNGVTYVQKVNQYSDFSKEEFNNYFKKFLSVPHDLK TKYLVPLKEHLANNNITPANDLVGDFPDSRDYRGKYTLLPPKDQGMCGSCWAFATIANFE YLFAKIKGTMPTSFSEQQVVDCSTDNYGCDGGHPFYSFLYFINNGVCLGDEYPYKGHDDF FCLNYRCSFLGSMHFIGDVKPNELIMALNYVGPVTIGVGASDEFVLYSGGVFDGECASEL NHAVLLVGYGQVKKSLAFDDSHSNVDSSLIKKYKENIKGDDDETIYYWIIRNSWGTEWGE GGYIRLKRNKEGDDGFCGVGTDVFFPIY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1325000.fa Sequence name : PCHAS_1325000 Sequence length : 508 VALUES OF COMPUTED PARAMETERS Coef20 : 4.098 CoefTot : -0.134 ChDiff : -13 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.124 2.265 0.518 0.832 MesoH : -0.079 0.585 -0.213 0.349 MuHd_075 : 15.930 12.396 4.534 5.624 MuHd_095 : 9.409 3.821 1.280 2.164 MuHd_100 : 15.772 15.511 4.898 5.380 MuHd_105 : 30.593 24.629 8.492 8.208 Hmax_075 : 11.083 11.433 0.790 5.063 Hmax_095 : -0.962 7.700 -1.640 2.990 Hmax_100 : 5.900 10.500 0.580 3.840 Hmax_105 : 12.500 13.100 1.114 4.650 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9060 0.0940 DFMC : 0.9603 0.0397
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 508 PCHAS_1325000 MMNDIRRINFTTTGIDSLNENGTYSKGNHKKTIKICAYAITAIALFFIGGVYFKYQTDRNALNAIDEAELMNKEIAHLRE 80 ILKKYKATTNDDNEFEYPTNDDMNEDSEDGEHQLLLMLHKLLKNNANKVNTFGINNESNTNTDNTYIFTQKLESMQDNIK 160 YASKFFKYMKKYNKKYENMDEQLERFENFKISHMKVKKHNEMIGKNGVTYVQKVNQYSDFSKEEFNNYFKKFLSVPHDLK 240 TKYLVPLKEHLANNNITPANDLVGDFPDSRDYRGKYTLLPPKDQGMCGSCWAFATIANFEYLFAKIKGTMPTSFSEQQVV 320 DCSTDNYGCDGGHPFYSFLYFINNGVCLGDEYPYKGHDDFFCLNYRCSFLGSMHFIGDVKPNELIMALNYVGPVTIGVGA 400 SDEFVLYSGGVFDGECASELNHAVLLVGYGQVKKSLAFDDSHSNVDSSLIKKYKENIKGDDDETIYYWIIRNSWGTEWGE 480 GGYIRLKRNKEGDDGFCGVGTDVFFPIY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1325000 6 -MMNDIR|RI 0.079 . PCHAS_1325000 7 MMNDIRR|IN 0.136 . PCHAS_1325000 26 ENGTYSK|GN 0.067 . PCHAS_1325000 30 YSKGNHK|KT 0.063 . PCHAS_1325000 31 SKGNHKK|TI 0.143 . PCHAS_1325000 34 NHKKTIK|IC 0.063 . PCHAS_1325000 54 IGGVYFK|YQ 0.062 . PCHAS_1325000 59 FKYQTDR|NA 0.107 . PCHAS_1325000 73 EAELMNK|EI 0.060 . PCHAS_1325000 79 KEIAHLR|EI 0.094 . PCHAS_1325000 83 HLREILK|KY 0.060 . PCHAS_1325000 84 LREILKK|YK 0.125 . PCHAS_1325000 86 EILKKYK|AT 0.065 . PCHAS_1325000 120 LLLMLHK|LL 0.059 . PCHAS_1325000 123 MLHKLLK|NN 0.069 . PCHAS_1325000 128 LKNNANK|VN 0.070 . PCHAS_1325000 151 TYIFTQK|LE 0.064 . PCHAS_1325000 160 SMQDNIK|YA 0.080 . PCHAS_1325000 164 NIKYASK|FF 0.063 . PCHAS_1325000 167 YASKFFK|YM 0.089 . PCHAS_1325000 170 KFFKYMK|KY 0.067 . PCHAS_1325000 171 FFKYMKK|YN 0.130 . PCHAS_1325000 174 YMKKYNK|KY 0.066 . PCHAS_1325000 175 MKKYNKK|YE 0.107 . PCHAS_1325000 185 MDEQLER|FE 0.117 . PCHAS_1325000 190 ERFENFK|IS 0.068 . PCHAS_1325000 195 FKISHMK|VK 0.077 . PCHAS_1325000 197 ISHMKVK|KH 0.076 . PCHAS_1325000 198 SHMKVKK|HN 0.164 . PCHAS_1325000 205 HNEMIGK|NG 0.060 . PCHAS_1325000 213 GVTYVQK|VN 0.060 . PCHAS_1325000 222 QYSDFSK|EE 0.066 . PCHAS_1325000 230 EFNNYFK|KF 0.060 . PCHAS_1325000 231 FNNYFKK|FL 0.158 . PCHAS_1325000 240 SVPHDLK|TK 0.054 . PCHAS_1325000 242 PHDLKTK|YL 0.064 . PCHAS_1325000 248 KYLVPLK|EH 0.053 . PCHAS_1325000 270 GDFPDSR|DY 0.094 . PCHAS_1325000 273 PDSRDYR|GK 0.374 . PCHAS_1325000 275 SRDYRGK|YT 0.071 . PCHAS_1325000 282 YTLLPPK|DQ 0.071 . PCHAS_1325000 305 FEYLFAK|IK 0.081 . PCHAS_1325000 307 YLFAKIK|GT 0.070 . PCHAS_1325000 355 GDEYPYK|GH 0.070 . PCHAS_1325000 366 FFCLNYR|CS 0.079 . PCHAS_1325000 380 HFIGDVK|PN 0.061 . PCHAS_1325000 433 VGYGQVK|KS 0.059 . PCHAS_1325000 434 GYGQVKK|SL 0.116 . PCHAS_1325000 451 VDSSLIK|KY 0.064 . PCHAS_1325000 452 DSSLIKK|YK 0.124 . PCHAS_1325000 454 SLIKKYK|EN 0.086 . PCHAS_1325000 458 KYKENIK|GD 0.065 . PCHAS_1325000 471 IYYWIIR|NS 0.098 . PCHAS_1325000 485 GEGGYIR|LK 0.100 . PCHAS_1325000 487 GGYIRLK|RN 0.063 . PCHAS_1325000 488 GYIRLKR|NK 0.499 . PCHAS_1325000 490 IRLKRNK|EG 0.081 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1325000 ATGATGAACGATATAAGACGAATAAATTTTACCACAACTGGTATCGACAGCTTGAATGAA AATGGCACATATTCAAAAGGAAATCACAAGAAAACTATAAAAATATGTGCATATGCAATT ACAGCAATTGCATTATTTTTTATTGGTGGTGTATATTTTAAATACCAAACAGATAGAAAC GCTTTAAATGCAATCGATGAAGCAGAGTTAATGAATAAAGAAATAGCACATTTAAGAGAA ATTTTGAAAAAATATAAAGCAACAACAAACGACGATAATGAATTTGAATACCCAACAAAT GACGATATGAATGAAGATAGTGAAGATGGTGAACATCAATTGCTATTAATGTTACATAAA CTTTTAAAAAATAATGCTAATAAAGTAAATACCTTTGGTATTAATAATGAATCAAATACA AATACCGATAATACGTACATATTTACCCAAAAACTTGAAAGCATGCAAGATAACATAAAA TATGCATCAAAATTTTTCAAGTATATGAAAAAATATAATAAAAAATACGAAAATATGGAT GAGCAATTAGAAAGATTTGAAAACTTTAAAATAAGTCACATGAAAGTTAAAAAACACAAT GAAATGATAGGTAAAAATGGTGTTACATATGTACAAAAAGTAAACCAATATAGTGATTTT TCGAAGGAAGAATTTAATAATTATTTTAAAAAATTCTTATCTGTTCCCCACGATTTGAAA ACCAAATATTTAGTACCACTAAAAGAACACTTAGCTAATAATAATATTACTCCCGCAAAT GATCTAGTAGGAGATTTTCCAGATAGTCGAGATTATAGAGGTAAGTATACATTACTTCCT CCAAAGGATCAAGGTATGTGCGGATCTTGCTGGGCATTTGCTACTATAGCAAATTTTGAA TACCTTTTTGCAAAAATAAAGGGTACCATGCCTACAAGTTTTAGTGAACAGCAAGTTGTA GATTGTTCTACTGACAATTATGGATGTGATGGTGGTCATCCATTTTATTCATTTTTATAT TTTATTAATAATGGAGTATGCTTAGGCGATGAATATCCATACAAAGGCCATGACGATTTT TTCTGTTTAAACTATAGATGTTCATTTTTAGGAAGCATGCACTTCATTGGTGACGTAAAA CCAAATGAATTAATTATGGCCTTAAATTATGTAGGACCAGTAACTATTGGCGTTGGTGCA TCCGATGAATTTGTTTTATACTCGGGTGGTGTATTTGATGGTGAATGTGCTTCAGAGTTA AATCATGCTGTTTTACTAGTAGGATATGGCCAAGTTAAAAAGAGCTTAGCATTTGATGAT AGTCATAGTAATGTAGATAGCAGTTTGATAAAAAAATATAAGGAAAATATCAAAGGTGAC GATGATGAAACAATATATTACTGGATCATTAGAAATTCATGGGGTACAGAGTGGGGAGAA GGTGGTTATATAAGACTTAAAAGAAACAAAGAAGGAGACGATGGTTTTTGTGGAGTTGGT ACTGATGTTTTCTTCCCAATTTATTAA
  • Download Fasta

  • Fasta :-

    MMNDIRRINFTTTGIDSLNENGTYSKGNHKKTIKICAYAITAIALFFIGGVYFKYQTDRN ALNAIDEAELMNKEIAHLREILKKYKATTNDDNEFEYPTNDDMNEDSEDGEHQLLLMLHK LLKNNANKVNTFGINNESNTNTDNTYIFTQKLESMQDNIKYASKFFKYMKKYNKKYENMD EQLERFENFKISHMKVKKHNEMIGKNGVTYVQKVNQYSDFSKEEFNNYFKKFLSVPHDLK TKYLVPLKEHLANNNITPANDLVGDFPDSRDYRGKYTLLPPKDQGMCGSCWAFATIANFE YLFAKIKGTMPTSFSEQQVVDCSTDNYGCDGGHPFYSFLYFINNGVCLGDEYPYKGHDDF FCLNYRCSFLGSMHFIGDVKPNELIMALNYVGPVTIGVGASDEFVLYSGGVFDGECASEL NHAVLLVGYGQVKKSLAFDDSHSNVDSSLIKKYKENIKGDDDETIYYWIIRNSWGTEWGE GGYIRLKRNKEGDDGFCGVGTDVFFPIY

  • title: active site
  • coordinates: Q284,C290,H422,N472
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1325000154 SQKLESMQDN0.996unspPCHAS_1325000443 SDDSHSNVDS0.995unsp

PCHAS_132500      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India