PCHAS_1355400 | mitochondrial intermediate peptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:  GO:0005739      

  • Curated_GO_Components:  mitochondrion      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1355400OTHER0.9973680.0001140.002518
No Results

  • Fasta :-

    >PCHAS_1355400 MENSIRYLKRVGKISIRENVGRGICTDRKVLVNKFVEDKDNINFKNALKKIEVSRVRLNI KGGYENIFKDKKCYFSGNYKYEQTLKSVDKLKNSDIEYIDCVLKKVNNINDKDEEGCILE LKGISNDGENILEFTDMCIKICKKLLQDIFKERNIYIIVNRIDTVSNNLCKLGDALELLR NLHNNNNVILKAHEGLEKLTNFIDEINIDEKIYNFLKQKYNDNIDILNYEHKEVLENMIQ SMENQGVHIKDKTKKKEYLELQAQEKYFSFHSSSNFSNNLEGVYIEKNKLLQYIDKNILI EYENKIRPLYKNNKIKTSYLYPTNDYIYILQDSSFLLTLLENIPEQNLREKIYSLFKKPN KEFQNNILVLQYYRNMLIIYRNFKNYNEYALKNCILNSPDKVLYFLEKVFKKILPHFFDE LKFIERYIQFCEGRNRSSVSPTNENDDNAGLGSGCKDGSSSLSLVTPENIFYYINKIKME KLKKIEDKMNDHLTLYDVLSFVIKILKKSYLLDMVSVIPMKGELWDENILKFEIKKDNHI YGYIYMDLFERENKNQAIAQYTVRCSKNMNTCLKYKWFEEGNEVGIPFFYTGIIKNEKNN QDISENAMYRQTTSTFLVCNFKANRDKNKDVEKKGEPKENTKCDFISDEIKNFLESIKMN VEKVNVFLHEFGHTLHCILSSTYLQHLSGNRSGADFSEFSSHLFEEYLNSYEALSILYSQ KAEENEIKNMITNYVKNKNIICYYPIVQLIIQSIVDQIFYSLSHNSNNMNERKQLIENEI KTYFLGLYYKNIFILDFFPHIHFSKTTHLIHYPSNYYCYLYCSVLAKYIWNRTFKNDLYN LDSSSRIVKFLEGGSVNSSLRNIISLAETDKDKIEYYTENPHHIPLDDFFEYYQEGDKQQ IYDSFFRSIVP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1355400.fa Sequence name : PCHAS_1355400 Sequence length : 911 VALUES OF COMPUTED PARAMETERS Coef20 : 4.208 CoefTot : -0.249 ChDiff : 1 ZoneTo : 17 KR : 5 DE : 1 CleavSite : 19 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.859 1.541 0.161 0.586 MesoH : -0.666 0.127 -0.463 0.207 MuHd_075 : 16.344 13.341 6.054 2.268 MuHd_095 : 61.457 26.083 15.033 11.333 MuHd_100 : 60.259 27.470 14.505 11.997 MuHd_105 : 48.667 24.678 11.795 10.743 Hmax_075 : -12.717 1.983 -4.129 -0.780 Hmax_095 : 14.600 12.700 2.623 4.660 Hmax_100 : 14.600 12.700 2.623 4.660 Hmax_105 : 3.675 8.800 -0.496 3.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3898 0.6102 DFMC : 0.6567 0.3433
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 911 PCHAS_1355400 MENSIRYLKRVGKISIRENVGRGICTDRKVLVNKFVEDKDNINFKNALKKIEVSRVRLNIKGGYENIFKDKKCYFSGNYK 80 YEQTLKSVDKLKNSDIEYIDCVLKKVNNINDKDEEGCILELKGISNDGENILEFTDMCIKICKKLLQDIFKERNIYIIVN 160 RIDTVSNNLCKLGDALELLRNLHNNNNVILKAHEGLEKLTNFIDEINIDEKIYNFLKQKYNDNIDILNYEHKEVLENMIQ 240 SMENQGVHIKDKTKKKEYLELQAQEKYFSFHSSSNFSNNLEGVYIEKNKLLQYIDKNILIEYENKIRPLYKNNKIKTSYL 320 YPTNDYIYILQDSSFLLTLLENIPEQNLREKIYSLFKKPNKEFQNNILVLQYYRNMLIIYRNFKNYNEYALKNCILNSPD 400 KVLYFLEKVFKKILPHFFDELKFIERYIQFCEGRNRSSVSPTNENDDNAGLGSGCKDGSSSLSLVTPENIFYYINKIKME 480 KLKKIEDKMNDHLTLYDVLSFVIKILKKSYLLDMVSVIPMKGELWDENILKFEIKKDNHIYGYIYMDLFERENKNQAIAQ 560 YTVRCSKNMNTCLKYKWFEEGNEVGIPFFYTGIIKNEKNNQDISENAMYRQTTSTFLVCNFKANRDKNKDVEKKGEPKEN 640 TKCDFISDEIKNFLESIKMNVEKVNVFLHEFGHTLHCILSSTYLQHLSGNRSGADFSEFSSHLFEEYLNSYEALSILYSQ 720 KAEENEIKNMITNYVKNKNIICYYPIVQLIIQSIVDQIFYSLSHNSNNMNERKQLIENEIKTYFLGLYYKNIFILDFFPH 800 IHFSKTTHLIHYPSNYYCYLYCSVLAKYIWNRTFKNDLYNLDSSSRIVKFLEGGSVNSSLRNIISLAETDKDKIEYYTEN 880 PHHIPLDDFFEYYQEGDKQQIYDSFFRSIVP 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ............................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1355400 6 -MENSIR|YL 0.106 . PCHAS_1355400 9 NSIRYLK|RV 0.178 . PCHAS_1355400 10 SIRYLKR|VG 0.193 . PCHAS_1355400 13 YLKRVGK|IS 0.131 . PCHAS_1355400 17 VGKISIR|EN 0.075 . PCHAS_1355400 22 IRENVGR|GI 0.155 . PCHAS_1355400 28 RGICTDR|KV 0.095 . PCHAS_1355400 29 GICTDRK|VL 0.067 . PCHAS_1355400 34 RKVLVNK|FV 0.119 . PCHAS_1355400 39 NKFVEDK|DN 0.068 . PCHAS_1355400 45 KDNINFK|NA 0.083 . PCHAS_1355400 49 NFKNALK|KI 0.062 . PCHAS_1355400 50 FKNALKK|IE 0.084 . PCHAS_1355400 55 KKIEVSR|VR 0.081 . PCHAS_1355400 57 IEVSRVR|LN 0.087 . PCHAS_1355400 61 RVRLNIK|GG 0.063 . PCHAS_1355400 69 GYENIFK|DK 0.063 . PCHAS_1355400 71 ENIFKDK|KC 0.067 . PCHAS_1355400 72 NIFKDKK|CY 0.090 . PCHAS_1355400 80 YFSGNYK|YE 0.061 . PCHAS_1355400 86 KYEQTLK|SV 0.108 . PCHAS_1355400 90 TLKSVDK|LK 0.065 . PCHAS_1355400 92 KSVDKLK|NS 0.069 . PCHAS_1355400 104 YIDCVLK|KV 0.063 . PCHAS_1355400 105 IDCVLKK|VN 0.099 . PCHAS_1355400 112 VNNINDK|DE 0.076 . PCHAS_1355400 122 GCILELK|GI 0.071 . PCHAS_1355400 140 FTDMCIK|IC 0.054 . PCHAS_1355400 143 MCIKICK|KL 0.062 . PCHAS_1355400 144 CIKICKK|LL 0.091 . PCHAS_1355400 151 LLQDIFK|ER 0.061 . PCHAS_1355400 153 QDIFKER|NI 0.107 . PCHAS_1355400 161 IYIIVNR|ID 0.082 . PCHAS_1355400 171 VSNNLCK|LG 0.067 . PCHAS_1355400 180 DALELLR|NL 0.069 . PCHAS_1355400 191 NNNVILK|AH 0.077 . PCHAS_1355400 198 AHEGLEK|LT 0.060 . PCHAS_1355400 211 EINIDEK|IY 0.057 . PCHAS_1355400 217 KIYNFLK|QK 0.059 . PCHAS_1355400 219 YNFLKQK|YN 0.068 . PCHAS_1355400 232 ILNYEHK|EV 0.085 . PCHAS_1355400 250 NQGVHIK|DK 0.076 . PCHAS_1355400 252 GVHIKDK|TK 0.069 . PCHAS_1355400 254 HIKDKTK|KK 0.071 . PCHAS_1355400 255 IKDKTKK|KE 0.097 . PCHAS_1355400 256 KDKTKKK|EY 0.123 . PCHAS_1355400 266 ELQAQEK|YF 0.067 . PCHAS_1355400 287 EGVYIEK|NK 0.053 . PCHAS_1355400 289 VYIEKNK|LL 0.065 . PCHAS_1355400 296 LLQYIDK|NI 0.065 . PCHAS_1355400 305 LIEYENK|IR 0.054 . PCHAS_1355400 307 EYENKIR|PL 0.084 . PCHAS_1355400 311 KIRPLYK|NN 0.070 . PCHAS_1355400 314 PLYKNNK|IK 0.060 . PCHAS_1355400 316 YKNNKIK|TS 0.072 . PCHAS_1355400 349 IPEQNLR|EK 0.086 . PCHAS_1355400 351 EQNLREK|IY 0.063 . PCHAS_1355400 357 KIYSLFK|KP 0.057 . PCHAS_1355400 358 IYSLFKK|PN 0.132 . PCHAS_1355400 361 LFKKPNK|EF 0.060 . PCHAS_1355400 374 LVLQYYR|NM 0.069 . PCHAS_1355400 381 NMLIIYR|NF 0.067 . PCHAS_1355400 384 IIYRNFK|NY 0.094 . PCHAS_1355400 392 YNEYALK|NC 0.055 . PCHAS_1355400 401 ILNSPDK|VL 0.065 . PCHAS_1355400 408 VLYFLEK|VF 0.076 . PCHAS_1355400 411 FLEKVFK|KI 0.068 . PCHAS_1355400 412 LEKVFKK|IL 0.107 . PCHAS_1355400 422 HFFDELK|FI 0.068 . PCHAS_1355400 426 ELKFIER|YI 0.091 . PCHAS_1355400 434 IQFCEGR|NR 0.091 . PCHAS_1355400 436 FCEGRNR|SS 0.084 . PCHAS_1355400 456 GLGSGCK|DG 0.069 . PCHAS_1355400 476 IFYYINK|IK 0.069 . PCHAS_1355400 478 YYINKIK|ME 0.057 . PCHAS_1355400 481 NKIKMEK|LK 0.061 . PCHAS_1355400 483 IKMEKLK|KI 0.099 . PCHAS_1355400 484 KMEKLKK|IE 0.106 . PCHAS_1355400 488 LKKIEDK|MN 0.074 . PCHAS_1355400 504 VLSFVIK|IL 0.069 . PCHAS_1355400 507 FVIKILK|KS 0.053 . PCHAS_1355400 508 VIKILKK|SY 0.097 . PCHAS_1355400 521 VSVIPMK|GE 0.065 . PCHAS_1355400 531 WDENILK|FE 0.071 . PCHAS_1355400 535 ILKFEIK|KD 0.068 . PCHAS_1355400 536 LKFEIKK|DN 0.126 . PCHAS_1355400 551 YMDLFER|EN 0.069 . PCHAS_1355400 554 LFERENK|NQ 0.114 . PCHAS_1355400 564 IAQYTVR|CS 0.085 . PCHAS_1355400 567 YTVRCSK|NM 0.105 . PCHAS_1355400 574 NMNTCLK|YK 0.076 . PCHAS_1355400 576 NTCLKYK|WF 0.076 . PCHAS_1355400 595 FYTGIIK|NE 0.053 . PCHAS_1355400 598 GIIKNEK|NN 0.061 . PCHAS_1355400 610 SENAMYR|QT 0.098 . PCHAS_1355400 622 FLVCNFK|AN 0.066 . PCHAS_1355400 625 CNFKANR|DK 0.089 . PCHAS_1355400 627 FKANRDK|NK 0.072 . PCHAS_1355400 629 ANRDKNK|DV 0.172 . PCHAS_1355400 633 KNKDVEK|KG 0.083 . PCHAS_1355400 634 NKDVEKK|GE 0.099 . PCHAS_1355400 638 EKKGEPK|EN 0.067 . PCHAS_1355400 642 EPKENTK|CD 0.063 . PCHAS_1355400 651 FISDEIK|NF 0.066 . PCHAS_1355400 658 NFLESIK|MN 0.061 . PCHAS_1355400 663 IKMNVEK|VN 0.060 . PCHAS_1355400 691 QHLSGNR|SG 0.075 . PCHAS_1355400 721 SILYSQK|AE 0.070 . PCHAS_1355400 728 AEENEIK|NM 0.059 . PCHAS_1355400 736 MITNYVK|NK 0.055 . PCHAS_1355400 738 TNYVKNK|NI 0.082 . PCHAS_1355400 772 SNNMNER|KQ 0.088 . PCHAS_1355400 773 NNMNERK|QL 0.102 . PCHAS_1355400 781 LIENEIK|TY 0.061 . PCHAS_1355400 790 FLGLYYK|NI 0.060 . PCHAS_1355400 805 PHIHFSK|TT 0.064 . PCHAS_1355400 827 YCSVLAK|YI 0.079 . PCHAS_1355400 832 AKYIWNR|TF 0.084 . PCHAS_1355400 835 IWNRTFK|ND 0.139 . PCHAS_1355400 846 NLDSSSR|IV 0.102 . PCHAS_1355400 849 SSSRIVK|FL 0.284 . PCHAS_1355400 861 SVNSSLR|NI 0.091 . PCHAS_1355400 871 SLAETDK|DK 0.072 . PCHAS_1355400 873 AETDKDK|IE 0.059 . PCHAS_1355400 898 YYQEGDK|QQ 0.051 . PCHAS_1355400 907 IYDSFFR|SI 0.131 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1355400 ATGGAAAATTCAATTCGTTACTTAAAACGGGTAGGAAAAATATCGATACGTGAAAATGTG GGTAGAGGTATTTGTACTGATAGGAAAGTATTGGTTAACAAGTTTGTTGAAGATAAAGAT AATATAAATTTTAAGAATGCTTTAAAAAAAATTGAAGTTAGTAGAGTTAGGTTAAATATA AAGGGGGGTTATGAGAACATCTTTAAAGATAAAAAATGTTACTTCAGTGGAAATTATAAG TATGAACAAACCTTAAAATCTGTAGATAAATTAAAAAATAGTGATATTGAATATATCGAT TGTGTTTTAAAAAAAGTTAACAACATAAATGATAAAGATGAAGAGGGATGTATTCTTGAA TTAAAAGGAATATCTAATGATGGTGAAAATATTTTAGAGTTTACTGATATGTGTATAAAA ATATGTAAAAAATTATTACAAGATATATTTAAAGAAAGGAATATATATATAATTGTAAAT AGGATAGACACTGTTTCAAATAATTTATGTAAATTAGGTGATGCTTTAGAATTGTTAAGA AATTTACATAACAATAATAATGTAATTTTAAAAGCTCATGAAGGTTTAGAAAAGTTGACA AATTTTATTGATGAGATAAATATCGATGAAAAAATTTATAACTTTTTAAAACAAAAATAT AATGATAATATAGATATATTAAATTATGAACATAAAGAAGTTTTAGAAAATATGATTCAA TCTATGGAAAATCAGGGTGTACATATTAAAGACAAAACAAAGAAAAAAGAATATTTAGAA TTACAAGCACAAGAGAAATATTTTTCATTTCATTCATCTTCAAATTTTTCAAATAACTTA GAAGGAGTTTATATTGAAAAAAATAAACTATTACAATATATAGATAAAAATATATTGATT GAATATGAAAATAAGATTCGACCTTTATATAAAAATAATAAAATAAAAACAAGCTATTTA TATCCTACTAATGATTATATATATATTTTACAAGATAGTTCTTTTTTATTAACACTTTTA GAAAATATTCCTGAACAGAACTTAAGAGAAAAAATCTACAGCTTATTTAAAAAACCAAAT AAAGAGTTTCAAAATAATATTTTAGTTTTACAATATTATAGAAATATGTTAATTATTTAT AGAAATTTTAAAAACTACAATGAATATGCATTAAAAAATTGTATATTAAATTCTCCCGAT AAGGTCTTATATTTTTTAGAAAAGGTTTTTAAAAAAATATTACCCCATTTCTTCGATGAG TTAAAATTCATAGAGCGTTATATTCAGTTTTGTGAAGGTCGAAATCGAAGCAGTGTATCT CCAACAAATGAAAATGATGACAATGCTGGCTTAGGTAGTGGTTGCAAAGATGGTAGTAGT AGCTTGTCTTTAGTAACTCCAGAAAACATATTCTACTATATTAATAAAATAAAAATGGAA AAGTTGAAAAAGATTGAAGACAAGATGAACGACCATTTAACCTTATATGATGTTTTAAGT TTCGTCATAAAAATTTTAAAAAAAAGTTATCTGTTAGATATGGTAAGTGTGATACCAATG AAAGGAGAACTCTGGGATGAAAATATTTTAAAATTTGAAATTAAAAAAGATAATCATATT TATGGTTATATATATATGGATTTATTTGAAAGGGAAAATAAAAATCAAGCAATAGCACAA TATACAGTTCGATGCTCTAAAAATATGAACACCTGTTTAAAGTATAAATGGTTTGAAGAA GGTAACGAAGTTGGTATTCCATTTTTCTACACAGGCATCATTAAAAATGAAAAAAATAAT CAAGACATATCTGAAAATGCTATGTATAGACAAACTACCTCCACATTTTTGGTTTGCAAT TTTAAAGCCAACCGTGATAAGAATAAAGATGTAGAGAAAAAAGGCGAACCCAAGGAAAAC ACAAAATGCGATTTTATCTCTGACGAAATAAAAAACTTTTTAGAGAGCATTAAAATGAAT GTAGAAAAAGTTAATGTGTTTCTTCATGAGTTTGGACATACATTACATTGTATACTAAGC TCAACATATTTACAACATTTATCAGGAAATAGAAGTGGAGCAGATTTTTCAGAATTTTCA TCCCATCTGTTTGAAGAATATTTAAATAGCTATGAAGCATTATCTATTTTATATTCACAA AAAGCGGAAGAAAATGAAATAAAAAATATGATAACAAATTATGTTAAAAATAAAAATATT ATATGTTACTACCCAATTGTCCAACTTATTATACAATCTATTGTTGATCAAATATTTTAT TCTTTATCTCATAATTCAAATAATATGAATGAAAGAAAACAATTAATTGAAAATGAAATA AAAACATACTTTTTAGGATTATATTATAAAAATATTTTTATATTAGATTTTTTTCCTCAT ATTCATTTTTCAAAAACGACACATTTAATTCATTACCCTTCAAATTATTATTGCTATCTG TATTGCTCTGTATTGGCAAAGTATATATGGAACAGAACCTTTAAAAACGACTTGTATAAC TTAGACAGTTCGTCCCGCATCGTCAAATTTTTAGAGGGGGGCTCTGTTAATTCGAGCTTG CGAAATATCATATCCTTAGCCGAAACGGATAAGGACAAAATCGAGTATTACACGGAAAAC CCCCACCACATCCCGTTGGACGACTTTTTTGAGTATTACCAGGAAGGAGATAAGCAGCAG ATATACGATTCGTTTTTTCGTTCAATCGTGCCATGA
  • Download Fasta

  • Fasta :-

    MENSIRYLKRVGKISIRENVGRGICTDRKVLVNKFVEDKDNINFKNALKKIEVSRVRLNI KGGYENIFKDKKCYFSGNYKYEQTLKSVDKLKNSDIEYIDCVLKKVNNINDKDEEGCILE LKGISNDGENILEFTDMCIKICKKLLQDIFKERNIYIIVNRIDTVSNNLCKLGDALELLR NLHNNNNVILKAHEGLEKLTNFIDEINIDEKIYNFLKQKYNDNIDILNYEHKEVLENMIQ SMENQGVHIKDKTKKKEYLELQAQEKYFSFHSSSNFSNNLEGVYIEKNKLLQYIDKNILI EYENKIRPLYKNNKIKTSYLYPTNDYIYILQDSSFLLTLLENIPEQNLREKIYSLFKKPN KEFQNNILVLQYYRNMLIIYRNFKNYNEYALKNCILNSPDKVLYFLEKVFKKILPHFFDE LKFIERYIQFCEGRNRSSVSPTNENDDNAGLGSGCKDGSSSLSLVTPENIFYYINKIKME KLKKIEDKMNDHLTLYDVLSFVIKILKKSYLLDMVSVIPMKGELWDENILKFEIKKDNHI YGYIYMDLFERENKNQAIAQYTVRCSKNMNTCLKYKWFEEGNEVGIPFFYTGIIKNEKNN QDISENAMYRQTTSTFLVCNFKANRDKNKDVEKKGEPKENTKCDFISDEIKNFLESIKMN VEKVNVFLHEFGHTLHCILSSTYLQHLSGNRSGADFSEFSSHLFEEYLNSYEALSILYSQ KAEENEIKNMITNYVKNKNIICYYPIVQLIIQSIVDQIFYSLSHNSNNMNERKQLIENEI KTYFLGLYYKNIFILDFFPHIHFSKTTHLIHYPSNYYCYLYCSVLAKYIWNRTFKNDLYN LDSSSRIVKFLEGGSVNSSLRNIISLAETDKDKIEYYTENPHHIPLDDFFEYYQEGDKQQ IYDSFFRSIVP

  • title: Zn binding site
  • coordinates: H669,H673,E698
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_135540015 SVGKISIREN0.996unsp

PCHAS_135540      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India