PCHAS_1356700 | SprT-like domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1356700OTHER0.9999690.0000020.000029
No Results

  • Fasta :-

    >PCHAS_1356700 MYNEINKLTSVENEYLQKSWKKRRQKSRQFYLISSEDDIQIVDNSIFTNRHDNAVNNPSS NNVESYYKSDIQEEDPYTLEVIRQLSSIRIDSSTDSSNGKEVHASSRVKAKKEKKKKKRR EKKRGNNNKIIHHIPSVECVEDAIIYDESKDTEFPDLHELFSEYNLKYFYNRLESVQVKW SNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYKETLLHEMIHAFLFLNQKKSDKND GHGPEFKKHMYRINKLTGLSISIYHSFHDEVHFYRNHVWRCTGICRKYPPHFGYIKRSMN RPPGPKEKWWRSHSTYCSGHFVKIKELEDSKNVGENANKQVPDLNTTLEEEIGIPKKGRE KGREKNIDDRKNDTIQADDIMDDSMFNDTIIITDSNNKKLRKKVDACDNEFDIINLIKTL FNNSKESNIHNFSTPDNSIDYHKAFKSKNYFEID
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1356700.fa Sequence name : PCHAS_1356700 Sequence length : 454 VALUES OF COMPUTED PARAMETERS Coef20 : 3.431 CoefTot : -0.291 ChDiff : 14 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.071 1.018 0.149 0.419 MesoH : -1.331 0.068 -0.573 0.067 MuHd_075 : 31.562 18.447 9.824 5.811 MuHd_095 : 28.423 21.738 8.627 6.574 MuHd_100 : 31.914 23.422 9.897 7.422 MuHd_105 : 25.514 19.361 8.309 6.369 Hmax_075 : 4.900 5.833 -0.776 2.847 Hmax_095 : -3.100 6.300 -2.614 3.020 Hmax_100 : 4.400 8.500 -0.558 3.710 Hmax_105 : 0.900 5.300 -1.080 3.330 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7553 0.2447 DFMC : 0.9328 0.0672
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 454 PCHAS_1356700 MYNEINKLTSVENEYLQKSWKKRRQKSRQFYLISSEDDIQIVDNSIFTNRHDNAVNNPSSNNVESYYKSDIQEEDPYTLE 80 VIRQLSSIRIDSSTDSSNGKEVHASSRVKAKKEKKKKKRREKKRGNNNKIIHHIPSVECVEDAIIYDESKDTEFPDLHEL 160 FSEYNLKYFYNRLESVQVKWSNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYKETLLHEMIHAFLFLNQKKSDKND 240 GHGPEFKKHMYRINKLTGLSISIYHSFHDEVHFYRNHVWRCTGICRKYPPHFGYIKRSMNRPPGPKEKWWRSHSTYCSGH 320 FVKIKELEDSKNVGENANKQVPDLNTTLEEEIGIPKKGREKGREKNIDDRKNDTIQADDIMDDSMFNDTIIITDSNNKKL 400 RKKVDACDNEFDIINLIKTLFNNSKESNIHNFSTPDNSIDYHKAFKSKNYFEID 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1356700 7 MYNEINK|LT 0.068 . PCHAS_1356700 18 ENEYLQK|SW 0.073 . PCHAS_1356700 21 YLQKSWK|KR 0.070 . PCHAS_1356700 22 LQKSWKK|RR 0.088 . PCHAS_1356700 23 QKSWKKR|RQ 0.246 . PCHAS_1356700 24 KSWKKRR|QK 0.285 . PCHAS_1356700 26 WKKRRQK|SR 0.194 . PCHAS_1356700 28 KRRQKSR|QF 0.118 . PCHAS_1356700 50 NSIFTNR|HD 0.098 . PCHAS_1356700 68 NVESYYK|SD 0.077 . PCHAS_1356700 83 YTLEVIR|QL 0.091 . PCHAS_1356700 89 RQLSSIR|ID 0.077 . PCHAS_1356700 100 TDSSNGK|EV 0.105 . PCHAS_1356700 107 EVHASSR|VK 0.095 . PCHAS_1356700 109 HASSRVK|AK 0.069 . PCHAS_1356700 111 SSRVKAK|KE 0.082 . PCHAS_1356700 112 SRVKAKK|EK 0.139 . PCHAS_1356700 114 VKAKKEK|KK 0.067 . PCHAS_1356700 115 KAKKEKK|KK 0.091 . PCHAS_1356700 116 AKKEKKK|KK 0.113 . PCHAS_1356700 117 KKEKKKK|KR 0.107 . PCHAS_1356700 118 KEKKKKK|RR 0.152 . PCHAS_1356700 119 EKKKKKR|RE 0.191 . PCHAS_1356700 120 KKKKKRR|EK 0.216 . PCHAS_1356700 122 KKKRREK|KR 0.152 . PCHAS_1356700 123 KKRREKK|RG 0.251 . PCHAS_1356700 124 KRREKKR|GN 0.380 . PCHAS_1356700 129 KRGNNNK|II 0.100 . PCHAS_1356700 150 IIYDESK|DT 0.068 . PCHAS_1356700 167 FSEYNLK|YF 0.068 . PCHAS_1356700 172 LKYFYNR|LE 0.109 . PCHAS_1356700 179 LESVQVK|WS 0.075 . PCHAS_1356700 183 QVKWSNK|MK 0.061 . PCHAS_1356700 185 KWSNKMK|LC 0.075 . PCHAS_1356700 194 AGICIFK|KS 0.058 . PCHAS_1356700 195 GICIFKK|SG 0.129 . PCHAS_1356700 202 SGYCCIR|LS 0.078 . PCHAS_1356700 209 LSLPLLK|LR 0.058 . PCHAS_1356700 211 LPLLKLR|KI 0.091 . PCHAS_1356700 212 PLLKLRK|IK 0.081 . PCHAS_1356700 214 LKLRKIK|EY 0.147 . PCHAS_1356700 217 RKIKEYK|ET 0.069 . PCHAS_1356700 234 FLFLNQK|KS 0.060 . PCHAS_1356700 235 LFLNQKK|SD 0.133 . PCHAS_1356700 238 NQKKSDK|ND 0.074 . PCHAS_1356700 247 GHGPEFK|KH 0.060 . PCHAS_1356700 248 HGPEFKK|HM 0.092 . PCHAS_1356700 252 FKKHMYR|IN 0.087 . PCHAS_1356700 255 HMYRINK|LT 0.139 . PCHAS_1356700 275 DEVHFYR|NH 0.073 . PCHAS_1356700 280 YRNHVWR|CT 0.244 . PCHAS_1356700 286 RCTGICR|KY 0.077 . PCHAS_1356700 287 CTGICRK|YP 0.071 . PCHAS_1356700 296 PHFGYIK|RS 0.057 . PCHAS_1356700 297 HFGYIKR|SM 0.229 . PCHAS_1356700 301 IKRSMNR|PP 0.137 . PCHAS_1356700 306 NRPPGPK|EK 0.059 . PCHAS_1356700 308 PPGPKEK|WW 0.072 . PCHAS_1356700 311 PKEKWWR|SH 0.185 . PCHAS_1356700 323 CSGHFVK|IK 0.064 . PCHAS_1356700 325 GHFVKIK|EL 0.087 . PCHAS_1356700 331 KELEDSK|NV 0.066 . PCHAS_1356700 339 VGENANK|QV 0.072 . PCHAS_1356700 356 EEIGIPK|KG 0.058 . PCHAS_1356700 357 EIGIPKK|GR 0.121 . PCHAS_1356700 359 GIPKKGR|EK 0.119 . PCHAS_1356700 361 PKKGREK|GR 0.067 . PCHAS_1356700 363 KGREKGR|EK 0.097 . PCHAS_1356700 365 REKGREK|NI 0.068 . PCHAS_1356700 370 EKNIDDR|KN 0.107 . PCHAS_1356700 371 KNIDDRK|ND 0.080 . PCHAS_1356700 398 ITDSNNK|KL 0.059 . PCHAS_1356700 399 TDSNNKK|LR 0.107 . PCHAS_1356700 401 SNNKKLR|KK 0.128 . PCHAS_1356700 402 NNKKLRK|KV 0.137 . PCHAS_1356700 403 NKKLRKK|VD 0.073 . PCHAS_1356700 418 DIINLIK|TL 0.061 . PCHAS_1356700 425 TLFNNSK|ES 0.068 . PCHAS_1356700 443 NSIDYHK|AF 0.062 . PCHAS_1356700 446 DYHKAFK|SK 0.079 . PCHAS_1356700 448 HKAFKSK|NY 0.081 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1356700 ATGTACAATGAGATAAACAAATTAACGTCTGTAGAAAATGAATATTTACAAAAAAGTTGG AAAAAACGAAGACAAAAAAGTAGGCAGTTTTATTTAATTTCAAGCGAAGATGATATTCAA ATTGTAGATAATTCCATATTCACAAACAGACATGATAATGCTGTAAATAATCCAAGTTCA AATAATGTAGAAAGTTATTACAAAAGTGATATTCAAGAGGAAGATCCTTACACTCTTGAA GTTATACGACAGTTAAGTTCGATAAGAATCGATTCAAGCACAGATTCTTCGAATGGTAAG GAGGTTCATGCTAGTAGCCGAGTCAAGGCAAAAAAAGAAAAAAAAAAAAAAAAAAGACGA GAGAAAAAAAGGGGAAACAATAATAAAATTATTCATCACATTCCAAGTGTAGAATGTGTA GAAGATGCCATAATTTATGATGAATCGAAAGATACAGAGTTTCCAGATTTACATGAGCTT TTTTCGGAATATAATTTGAAATATTTTTACAATAGATTAGAAAGTGTGCAAGTAAAGTGG AGTAATAAAATGAAGTTATGTGCTGGAATATGCATATTTAAGAAGTCTGGATATTGCTGT ATTAGACTATCACTCCCTTTACTAAAACTTCGAAAAATAAAAGAATACAAAGAAACATTA CTACATGAAATGATTCATGCCTTTCTATTTTTAAATCAAAAAAAATCAGATAAAAACGAT GGACATGGTCCTGAATTCAAAAAGCATATGTACAGAATAAATAAATTAACAGGTCTAAGT ATAAGTATCTATCACAGTTTTCATGATGAAGTTCATTTTTATCGAAATCACGTCTGGCGA TGCACAGGAATTTGCAGAAAATACCCCCCACACTTTGGATACATAAAGCGATCCATGAAT CGTCCACCCGGCCCAAAGGAAAAGTGGTGGAGGAGCCACTCGACTTACTGCTCAGGGCAT TTTGTAAAAATTAAAGAATTGGAAGATTCCAAAAATGTAGGAGAAAATGCAAATAAGCAA GTGCCTGATCTTAATACAACGCTAGAGGAAGAAATTGGCATCCCCAAAAAAGGTCGAGAA AAGGGTAGAGAAAAGAATATAGATGATAGAAAAAACGATACCATACAAGCGGACGACATA ATGGATGATTCCATGTTCAATGATACAATAATAATAACGGATTCAAATAACAAAAAATTA AGAAAAAAAGTAGATGCATGTGATAATGAGTTCGACATAATAAACCTCATTAAAACGTTG TTTAACAATAGTAAAGAAAGTAATATTCATAATTTTTCAACTCCAGATAATTCAATAGAT TATCATAAGGCATTTAAAAGTAAAAACTATTTCGAAATAGATTAG
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  • Fasta :-

    MYNEINKLTSVENEYLQKSWKKRRQKSRQFYLISSEDDIQIVDNSIFTNRHDNAVNNPSS NNVESYYKSDIQEEDPYTLEVIRQLSSIRIDSSTDSSNGKEVHASSRVKAKKEKKKKKRR EKKRGNNNKIIHHIPSVECVEDAIIYDESKDTEFPDLHELFSEYNLKYFYNRLESVQVKW SNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYKETLLHEMIHAFLFLNQKKSDKND GHGPEFKKHMYRINKLTGLSISIYHSFHDEVHFYRNHVWRCTGICRKYPPHFGYIKRSMN RPPGPKEKWWRSHSTYCSGHFVKIKELEDSKNVGENANKQVPDLNTTLEEEIGIPKKGRE KGREKNIDDRKNDTIQADDIMDDSMFNDTIIITDSNNKKLRKKVDACDNEFDIINLIKTL FNNSKESNIHNFSTPDNSIDYHKAFKSKNYFEID

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_135670092 SIRIDSSTDS0.997unspPCHAS_135670092 SIRIDSSTDS0.997unspPCHAS_135670092 SIRIDSSTDS0.997unspPCHAS_1356700266 SSIYHSFHDE0.995unspPCHAS_135670010 SNKLTSVENE0.996unspPCHAS_135670019 SYLQKSWKKR0.992unsp

PCHAS_135670      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India