PCHAS_1367100 | peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1367100OTHER0.9999500.0000390.000011
No Results

  • Fasta :-

    >PCHAS_1367100 MDFDFSLQYCCDKNQNITYITILCCIIVNTICWKCKVLEPFKLLTVFLHEFSHASACWMT GGTVKGIEVNRDHGGCTNTVGGNKFLILPAGYIGSCFYGMFFILMAYINKWTLLSSAAFL CFLLLVVLIFYAENFFLRFLCVLFLAIIMGTWGLCVYFNEAKYWPLKVIMTFMGVLNEMY SMVDIFEDLITRTTPESDAYKYAKLTKCNSKFCGVLWCVINLGFVILTMYLIGVIHVKPF EN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1367100.fa Sequence name : PCHAS_1367100 Sequence length : 242 VALUES OF COMPUTED PARAMETERS Coef20 : 3.508 CoefTot : 0.000 ChDiff : 1 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.506 2.918 0.572 0.881 MesoH : 1.507 1.751 0.214 0.668 MuHd_075 : 17.660 9.518 6.437 1.792 MuHd_095 : 19.109 11.787 7.388 2.602 MuHd_100 : 21.130 15.378 8.013 3.359 MuHd_105 : 20.485 17.268 7.588 3.666 Hmax_075 : 8.867 6.300 2.616 1.622 Hmax_095 : 2.975 4.462 0.777 1.820 Hmax_100 : 10.000 11.900 3.562 3.450 Hmax_105 : 3.967 10.383 1.342 2.695 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9908 0.0092 DFMC : 0.9754 0.0246
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 242 PCHAS_1367100 MDFDFSLQYCCDKNQNITYITILCCIIVNTICWKCKVLEPFKLLTVFLHEFSHASACWMTGGTVKGIEVNRDHGGCTNTV 80 GGNKFLILPAGYIGSCFYGMFFILMAYINKWTLLSSAAFLCFLLLVVLIFYAENFFLRFLCVLFLAIIMGTWGLCVYFNE 160 AKYWPLKVIMTFMGVLNEMYSMVDIFEDLITRTTPESDAYKYAKLTKCNSKFCGVLWCVINLGFVILTMYLIGVIHVKPF 240 EN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1367100 13 LQYCCDK|NQ 0.060 . PCHAS_1367100 34 VNTICWK|CK 0.056 . PCHAS_1367100 36 TICWKCK|VL 0.073 . PCHAS_1367100 42 KVLEPFK|LL 0.059 . PCHAS_1367100 65 MTGGTVK|GI 0.082 . PCHAS_1367100 71 KGIEVNR|DH 0.139 . PCHAS_1367100 84 NTVGGNK|FL 0.056 . PCHAS_1367100 110 LMAYINK|WT 0.059 . PCHAS_1367100 138 AENFFLR|FL 0.116 . PCHAS_1367100 162 VYFNEAK|YW 0.063 . PCHAS_1367100 167 AKYWPLK|VI 0.068 . PCHAS_1367100 192 FEDLITR|TT 0.065 . PCHAS_1367100 201 PESDAYK|YA 0.070 . PCHAS_1367100 204 DAYKYAK|LT 0.062 . PCHAS_1367100 207 KYAKLTK|CN 0.070 . PCHAS_1367100 211 LTKCNSK|FC 0.072 . PCHAS_1367100 238 IGVIHVK|PF 0.071 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1367100 ATGGATTTTGATTTTAGTTTGCAATATTGCTGTGACAAAAATCAAAATATAACGTATATA ACTATTTTGTGCTGTATAATAGTAAATACAATATGTTGGAAATGTAAAGTTTTAGAGCCA TTTAAATTGCTGACTGTTTTTTTGCATGAATTTTCTCATGCATCCGCTTGTTGGATGACG GGGGGCACGGTGAAAGGAATAGAGGTAAATAGAGACCATGGAGGTTGCACAAACACAGTT GGTGGAAATAAGTTTTTAATTCTCCCAGCAGGATATATTGGATCATGTTTTTATGGAATG TTTTTTATTTTAATGGCATATATTAACAAATGGACCTTACTATCATCAGCAGCATTTTTA TGTTTTTTATTATTAGTTGTATTAATATTTTACGCAGAGAATTTTTTTTTACGATTTCTT TGTGTTTTATTTTTGGCTATAATAATGGGAACATGGGGATTGTGTGTGTATTTTAATGAA GCAAAATATTGGCCTTTAAAAGTTATTATGACTTTTATGGGGGTATTAAATGAAATGTAT AGTATGGTTGATATATTTGAAGATTTAATTACAAGAACAACACCGGAATCCGATGCATAT AAATATGCAAAACTAACAAAATGCAATTCTAAATTTTGTGGAGTTCTATGGTGTGTTATT AATTTAGGCTTTGTTATTTTAACAATGTATTTAATTGGCGTCATTCACGTAAAACCGTTT GAAAATTAA
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  • Fasta :-

    MDFDFSLQYCCDKNQNITYITILCCIIVNTICWKCKVLEPFKLLTVFLHEFSHASACWMT GGTVKGIEVNRDHGGCTNTVGGNKFLILPAGYIGSCFYGMFFILMAYINKWTLLSSAAFL CFLLLVVLIFYAENFFLRFLCVLFLAIIMGTWGLCVYFNEAKYWPLKVIMTFMGVLNEMY SMVDIFEDLITRTTPESDAYKYAKLTKCNSKFCGVLWCVINLGFVILTMYLIGVIHVKPF EN

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PCHAS_136710      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India