PCHAS_1400600 | lysophospholipase, putative

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1400600OTHER0.9996350.0002270.000139
No Results

  • Fasta :-

    >PCHAS_1400600 MELSEEEAQSAQHMLKSGNKDPSIMGDPDIGFFTNKHGLKIKTLKWLVKAPVGIVFLVHS LNSHCRFDYLKHNVTISNNEKAVLNDGDNFYVHKDSWIEELNKNGYSVYGLDLQGHGESE CYGNEKTHINEFDDFADDILQYMNMAHESIVNEAAKDNQENDNNAIGQKKRCTKCDLILK DESDICCSNEDKIIANGLYLRHPEKNQYKKTDYNIDLYKTPIPMYLVGLSMGGNIILRIL ELLSQRRYNYYNRLNIKGVCSLSGMVSAKEVKKKFSWKCFCIPMMTLSSLLFPTSRFSSN ATSETFPYIKDLYIYDKIFDGKPITNKFAHKLLEAVDNLNKDIDKMVKDVAILLIHSAND KNCSYTAAQEFYNNLKTKKKEFHTLDDMEHMITMEPGNEQVVKKLVDWMAGTQKETPKKK KAKKNLRSADDKNILPNEASPMQGTGVLTDPPKDKTTQDQVAQEQVSQAQVSQEQVSQEQ VSQEQVSQEQVSQEQVSQEQVSQEQVSQAQVSQEQVSQEQTSQEQTSQEQVSQEQTSQEQ VSQEQTSQEQVSQEQVSQEQTSQEQASQEQTSQEQASQEQTSQEQASQEQTSQEQTSQEQ TSQEQASQEQTSQEQASQEQTSQEQASQEQPAEEQAVQDQPAEEQYTQEQPAEEQALQNE AA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1400600.fa Sequence name : PCHAS_1400600 Sequence length : 662 VALUES OF COMPUTED PARAMETERS Coef20 : 3.136 CoefTot : 0.000 ChDiff : -43 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.971 1.494 0.362 0.639 MesoH : -0.495 0.319 -0.350 0.154 MuHd_075 : 24.303 7.845 6.185 2.641 MuHd_095 : 25.604 20.360 9.473 5.636 MuHd_100 : 35.551 22.275 11.485 6.510 MuHd_105 : 36.879 20.097 10.943 6.109 Hmax_075 : 2.300 -0.233 -2.936 1.410 Hmax_095 : 4.000 6.600 -0.621 3.020 Hmax_100 : 6.900 6.600 -0.480 3.020 Hmax_105 : 5.425 5.687 -0.850 2.782 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9685 0.0315 DFMC : 0.9075 0.0925
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 662 PCHAS_1400600 MELSEEEAQSAQHMLKSGNKDPSIMGDPDIGFFTNKHGLKIKTLKWLVKAPVGIVFLVHSLNSHCRFDYLKHNVTISNNE 80 KAVLNDGDNFYVHKDSWIEELNKNGYSVYGLDLQGHGESECYGNEKTHINEFDDFADDILQYMNMAHESIVNEAAKDNQE 160 NDNNAIGQKKRCTKCDLILKDESDICCSNEDKIIANGLYLRHPEKNQYKKTDYNIDLYKTPIPMYLVGLSMGGNIILRIL 240 ELLSQRRYNYYNRLNIKGVCSLSGMVSAKEVKKKFSWKCFCIPMMTLSSLLFPTSRFSSNATSETFPYIKDLYIYDKIFD 320 GKPITNKFAHKLLEAVDNLNKDIDKMVKDVAILLIHSANDKNCSYTAAQEFYNNLKTKKKEFHTLDDMEHMITMEPGNEQ 400 VVKKLVDWMAGTQKETPKKKKAKKNLRSADDKNILPNEASPMQGTGVLTDPPKDKTTQDQVAQEQVSQAQVSQEQVSQEQ 480 VSQEQVSQEQVSQEQVSQEQVSQEQVSQAQVSQEQVSQEQTSQEQTSQEQVSQEQTSQEQVSQEQTSQEQVSQEQVSQEQ 560 TSQEQASQEQTSQEQASQEQTSQEQASQEQTSQEQTSQEQTSQEQASQEQTSQEQASQEQTSQEQASQEQPAEEQAVQDQ 640 PAEEQYTQEQPAEEQALQNEAA 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ...................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1400600 16 SAQHMLK|SG 0.084 . PCHAS_1400600 20 MLKSGNK|DP 0.070 . PCHAS_1400600 36 IGFFTNK|HG 0.061 . PCHAS_1400600 40 TNKHGLK|IK 0.058 . PCHAS_1400600 42 KHGLKIK|TL 0.068 . PCHAS_1400600 45 LKIKTLK|WL 0.074 . PCHAS_1400600 49 TLKWLVK|AP 0.068 . PCHAS_1400600 66 SLNSHCR|FD 0.110 . PCHAS_1400600 71 CRFDYLK|HN 0.065 . PCHAS_1400600 81 TISNNEK|AV 0.086 . PCHAS_1400600 94 DNFYVHK|DS 0.082 . PCHAS_1400600 103 WIEELNK|NG 0.056 . PCHAS_1400600 126 ECYGNEK|TH 0.063 . PCHAS_1400600 156 IVNEAAK|DN 0.079 . PCHAS_1400600 169 NNAIGQK|KR 0.059 . PCHAS_1400600 170 NAIGQKK|RC 0.088 . PCHAS_1400600 171 AIGQKKR|CT 0.193 . PCHAS_1400600 174 QKKRCTK|CD 0.108 . PCHAS_1400600 180 KCDLILK|DE 0.063 . PCHAS_1400600 192 CCSNEDK|II 0.070 . PCHAS_1400600 201 ANGLYLR|HP 0.083 . PCHAS_1400600 205 YLRHPEK|NQ 0.065 . PCHAS_1400600 209 PEKNQYK|KT 0.072 . PCHAS_1400600 210 EKNQYKK|TD 0.102 . PCHAS_1400600 219 YNIDLYK|TP 0.059 . PCHAS_1400600 238 GGNIILR|IL 0.075 . PCHAS_1400600 246 LELLSQR|RY 0.065 . PCHAS_1400600 247 ELLSQRR|YN 0.114 . PCHAS_1400600 253 RYNYYNR|LN 0.099 . PCHAS_1400600 257 YNRLNIK|GV 0.080 . PCHAS_1400600 269 SGMVSAK|EV 0.127 . PCHAS_1400600 272 VSAKEVK|KK 0.061 . PCHAS_1400600 273 SAKEVKK|KF 0.117 . PCHAS_1400600 274 AKEVKKK|FS 0.211 . PCHAS_1400600 278 KKKFSWK|CF 0.080 . PCHAS_1400600 296 LLFPTSR|FS 0.103 . PCHAS_1400600 310 ETFPYIK|DL 0.069 . PCHAS_1400600 317 DLYIYDK|IF 0.066 . PCHAS_1400600 322 DKIFDGK|PI 0.073 . PCHAS_1400600 327 GKPITNK|FA 0.091 . PCHAS_1400600 331 TNKFAHK|LL 0.077 . PCHAS_1400600 341 AVDNLNK|DI 0.071 . PCHAS_1400600 345 LNKDIDK|MV 0.076 . PCHAS_1400600 348 DIDKMVK|DV 0.086 . PCHAS_1400600 361 IHSANDK|NC 0.066 . PCHAS_1400600 376 EFYNNLK|TK 0.064 . PCHAS_1400600 378 YNNLKTK|KK 0.074 . PCHAS_1400600 379 NNLKTKK|KE 0.096 . PCHAS_1400600 380 NLKTKKK|EF 0.132 . PCHAS_1400600 403 GNEQVVK|KL 0.077 . PCHAS_1400600 404 NEQVVKK|LV 0.215 . PCHAS_1400600 414 WMAGTQK|ET 0.066 . PCHAS_1400600 418 TQKETPK|KK 0.069 . PCHAS_1400600 419 QKETPKK|KK 0.091 . PCHAS_1400600 420 KETPKKK|KA 0.157 . PCHAS_1400600 421 ETPKKKK|AK 0.103 . PCHAS_1400600 423 PKKKKAK|KN 0.078 . PCHAS_1400600 424 KKKKAKK|NL 0.114 . PCHAS_1400600 427 KAKKNLR|SA 0.207 . PCHAS_1400600 432 LRSADDK|NI 0.088 . PCHAS_1400600 453 VLTDPPK|DK 0.073 . PCHAS_1400600 455 TDPPKDK|TT 0.086 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1400600 ATGGAGCTATCTGAGGAAGAAGCACAAAGTGCCCAGCACATGTTAAAATCGGGTAATAAA GACCCGTCAATAATGGGTGATCCTGATATTGGCTTTTTTACAAATAAACATGGTTTGAAG ATAAAAACATTAAAATGGCTTGTCAAGGCACCGGTAGGAATAGTATTTTTAGTGCACTCT TTAAATTCCCATTGTCGTTTTGATTATTTAAAACATAATGTCACTATATCGAATAATGAA AAGGCTGTTTTAAATGATGGCGATAATTTTTATGTCCATAAAGATAGTTGGATTGAAGAA TTAAACAAAAATGGGTATTCGGTTTATGGTTTAGATTTACAAGGACATGGTGAATCAGAA TGCTATGGTAATGAAAAAACCCACATTAATGAGTTTGATGATTTTGCTGATGACATACTT CAATATATGAATATGGCACATGAATCAATCGTTAACGAAGCTGCTAAGGATAATCAAGAA AATGATAATAATGCAATAGGACAAAAAAAGAGATGTACTAAATGTGATTTAATTTTAAAA GATGAATCTGATATCTGTTGTTCTAACGAAGATAAAATTATAGCCAATGGTTTATATTTA CGTCATCCCGAAAAAAATCAATATAAAAAAACTGACTATAACATAGATCTATATAAAACA CCTATACCAATGTATTTAGTTGGATTATCAATGGGAGGAAATATTATTTTGAGAATATTG GAACTGTTATCACAAAGGAGATACAACTATTATAATCGACTAAATATAAAAGGTGTTTGT TCATTATCAGGAATGGTATCAGCAAAGGAGGTAAAAAAAAAATTTTCATGGAAATGTTTT TGTATACCGATGATGACATTATCATCCCTTTTATTTCCAACATCTAGATTTTCGTCAAAT GCAACATCCGAAACATTTCCATATATAAAAGATTTATATATATATGATAAAATATTTGAT GGCAAACCTATTACTAATAAATTTGCTCATAAATTATTGGAAGCTGTTGATAATTTAAAT AAAGATATAGACAAAATGGTAAAAGATGTGGCCATACTTCTTATTCATTCTGCTAACGAT AAAAATTGCAGTTACACAGCCGCTCAGGAATTTTATAATAATTTGAAAACTAAAAAAAAA GAATTTCACACATTAGACGATATGGAACATATGATTACAATGGAGCCCGGAAATGAACAG GTTGTCAAAAAACTTGTAGATTGGATGGCAGGTACACAAAAAGAGACCCCCAAAAAAAAA AAAGCTAAAAAAAATCTCAGAAGTGCTGATGATAAGAATATCTTGCCAAATGAAGCTTCA CCAATGCAAGGCACTGGTGTTTTAACCGATCCCCCAAAGGACAAAACTACCCAAGATCAA GTTGCCCAAGAGCAAGTTTCCCAAGCGCAAGTTTCCCAAGAGCAAGTTTCCCAAGAGCAA GTTTCCCAAGAGCAAGTTTCCCAAGAGCAAGTTTCCCAAGAGCAAGTTTCCCAAGAGCAA GTTTCCCAAGAGCAAGTTTCCCAAGCGCAAGTTTCCCAAGAGCAAGTTTCCCAAGAGCAA ACTTCCCAAGAGCAAACTTCCCAAGAGCAAGTTTCCCAAGAGCAAACTTCCCAAGAGCAA GTTTCCCAAGAGCAAACTTCCCAAGAGCAAGTTTCCCAAGAGCAAGTTTCCCAAGAGCAA ACTTCCCAAGAGCAAGCTTCCCAAGAGCAAACTTCCCAAGAGCAAGCTTCCCAAGAGCAA ACTTCCCAAGAGCAAGCTTCCCAAGAGCAAACTTCCCAAGAGCAAACTTCCCAAGAGCAA ACTTCCCAAGAGCAAGCTTCCCAAGAGCAAACTTCCCAAGAGCAAGCTTCCCAAGAGCAA ACTTCCCAAGAGCAAGCTTCCCAAGAGCAACCTGCCGAAGAGCAAGCTGTTCAAGATCAA CCTGCTGAAGAGCAATATACCCAAGAGCAACCTGCCGAAGAGCAAGCTTTGCAAAACGAG GCTGCATAA
  • Download Fasta

  • Fasta :-

    MELSEEEAQSAQHMLKSGNKDPSIMGDPDIGFFTNKHGLKIKTLKWLVKAPVGIVFLVHS LNSHCRFDYLKHNVTISNNEKAVLNDGDNFYVHKDSWIEELNKNGYSVYGLDLQGHGESE CYGNEKTHINEFDDFADDILQYMNMAHESIVNEAAKDNQENDNNAIGQKKRCTKCDLILK DESDICCSNEDKIIANGLYLRHPEKNQYKKTDYNIDLYKTPIPMYLVGLSMGGNIILRIL ELLSQRRYNYYNRLNIKGVCSLSGMVSAKEVKKKFSWKCFCIPMMTLSSLLFPTSRFSSN ATSETFPYIKDLYIYDKIFDGKPITNKFAHKLLEAVDNLNKDIDKMVKDVAILLIHSAND KNCSYTAAQEFYNNLKTKKKEFHTLDDMEHMITMEPGNEQVVKKLVDWMAGTQKETPKKK KAKKNLRSADDKNILPNEASPMQGTGVLTDPPKDKTTQDQVAQEQVSQAQVSQEQVSQEQ VSQEQVSQEQVSQEQVSQEQVSQEQVSQAQVSQEQVSQEQTSQEQTSQEQVSQEQTSQEQ VSQEQTSQEQVSQEQVSQEQTSQEQASQEQTSQEQASQEQTSQEQASQEQTSQEQTSQEQ TSQEQASQEQTSQEQASQEQTSQEQASQEQPAEEQAVQDQPAEEQYTQEQPAEEQALQNE AA

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1400600298 STSRFSSNAT0.99unspPCHAS_1400600298 STSRFSSNAT0.99unspPCHAS_1400600298 STSRFSSNAT0.99unspPCHAS_1400600412 TWMAGTQKET0.994unspPCHAS_1400600517 SQEQVSQEQT0.995unspPCHAS_1400600522 SQEQTSQEQT0.996unspPCHAS_1400600532 SQEQVSQEQT0.995unspPCHAS_1400600542 SQEQVSQEQT0.995unspPCHAS_1400600557 SQEQVSQEQT0.995unspPCHAS_1400600562 SQEQTSQEQA0.995unspPCHAS_1400600567 SQEQASQEQT0.995unspPCHAS_1400600572 SQEQTSQEQA0.995unspPCHAS_1400600577 SQEQASQEQT0.995unspPCHAS_1400600582 SQEQTSQEQA0.995unspPCHAS_1400600587 SQEQASQEQT0.995unspPCHAS_1400600592 SQEQTSQEQT0.996unspPCHAS_1400600597 SQEQTSQEQT0.996unspPCHAS_1400600602 SQEQTSQEQA0.995unspPCHAS_1400600607 SQEQASQEQT0.995unspPCHAS_1400600612 SQEQTSQEQA0.995unspPCHAS_1400600617 SQEQASQEQT0.995unspPCHAS_1400600622 SQEQTSQEQA0.995unspPCHAS_1400600627 SQEQASQEQP0.992unspPCHAS_140060096 SVHKDSWIEE0.992unspPCHAS_1400600276 SKKKFSWKCF0.994unsp

PCHAS_140060      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India