PCHAS_1419400 | ubiquitin carboxyl-terminal hydrolase MINDY, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1419400OTHER0.9999810.0000070.000012
No Results

  • Fasta :-

    >PCHAS_1419400 MSSWLKHNYDENSDEEENIIVRFADYETFKSYVLNKYDKTHKSHNYQTDNIYFYTVKWIT FINRKVPILLQNKNGACPLLCIANILLLRNQLHIDKKIKKISQKVLEDKIISILLESNKK NVTNNSASCNYRKNIIECIDILPQLKYGLDVNCKFTDIQSFEYTKGLCIFDMLNIPLYHG WVISSDDKMFYPYLKDYSYNVIINKVIKYNEYYEKKKKAMSADESSNEKLIIMSQALNLY FESDDGGNSGPPKKIEENNNIHINDMIISKDNPNISKTLEFKTREQINTIPIENANSSFN TNSSSHKNEKIMKSHSASIPIFPDDLDKNMDDNLKTNMDQNPVLNLGNYNVDHDPWEETG KTDFNRRFFNANQNLYNNEIATNNNNHNIGNNKSNANQNNVNNNNDNSNGKKNTIISGFL KRDKKNNKGDKTEVSNPEWINKAGDVLKKKKESLTLLFSSQLNKKTKKKDKQTATDDENI NKEINNEDIKQPLKIEYINSEKNKIDTPKFPDDIISASENFKTNSFSFKSDILDTSVNNI DTNYEVFGKGNKKKNSTNKVHYENIIDNDNKYKEHIIINNYNTNVNLTPHEFHEALIILE FLEVYKTQLTLVGLKLLQENLNANQLVAFFRNNHFNTLFKYNNQLFLLVGDISFLHLRCT WELFDSVTNDTTYCDNNFKCITGDDMSNFFNQHISILNSFENINNLKGDMQSLNAYSAYL NNKKKKKKCTIM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1419400.fa Sequence name : PCHAS_1419400 Sequence length : 732 VALUES OF COMPUTED PARAMETERS Coef20 : 2.908 CoefTot : -0.297 ChDiff : 2 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.847 1.400 0.049 0.607 MesoH : -0.650 0.400 -0.454 0.241 MuHd_075 : 18.007 10.125 5.444 3.313 MuHd_095 : 23.807 13.006 6.135 4.306 MuHd_100 : 20.971 11.767 5.934 3.611 MuHd_105 : 13.869 7.768 4.726 2.259 Hmax_075 : -10.967 -7.117 -5.889 0.362 Hmax_095 : -8.575 -6.737 -5.895 0.510 Hmax_100 : -6.300 -4.200 -4.295 0.120 Hmax_105 : -11.700 -6.900 -6.164 -0.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9430 0.0570 DFMC : 0.9307 0.0693
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 732 PCHAS_1419400 MSSWLKHNYDENSDEEENIIVRFADYETFKSYVLNKYDKTHKSHNYQTDNIYFYTVKWITFINRKVPILLQNKNGACPLL 80 CIANILLLRNQLHIDKKIKKISQKVLEDKIISILLESNKKNVTNNSASCNYRKNIIECIDILPQLKYGLDVNCKFTDIQS 160 FEYTKGLCIFDMLNIPLYHGWVISSDDKMFYPYLKDYSYNVIINKVIKYNEYYEKKKKAMSADESSNEKLIIMSQALNLY 240 FESDDGGNSGPPKKIEENNNIHINDMIISKDNPNISKTLEFKTREQINTIPIENANSSFNTNSSSHKNEKIMKSHSASIP 320 IFPDDLDKNMDDNLKTNMDQNPVLNLGNYNVDHDPWEETGKTDFNRRFFNANQNLYNNEIATNNNNHNIGNNKSNANQNN 400 VNNNNDNSNGKKNTIISGFLKRDKKNNKGDKTEVSNPEWINKAGDVLKKKKESLTLLFSSQLNKKTKKKDKQTATDDENI 480 NKEINNEDIKQPLKIEYINSEKNKIDTPKFPDDIISASENFKTNSFSFKSDILDTSVNNIDTNYEVFGKGNKKKNSTNKV 560 HYENIIDNDNKYKEHIIINNYNTNVNLTPHEFHEALIILEFLEVYKTQLTLVGLKLLQENLNANQLVAFFRNNHFNTLFK 640 YNNQLFLLVGDISFLHLRCTWELFDSVTNDTTYCDNNFKCITGDDMSNFFNQHISILNSFENINNLKGDMQSLNAYSAYL 720 NNKKKKKKCTIM 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1419400 6 -MSSWLK|HN 0.070 . PCHAS_1419400 22 EENIIVR|FA 0.114 . PCHAS_1419400 30 ADYETFK|SY 0.067 . PCHAS_1419400 36 KSYVLNK|YD 0.071 . PCHAS_1419400 39 VLNKYDK|TH 0.061 . PCHAS_1419400 42 KYDKTHK|SH 0.074 . PCHAS_1419400 57 IYFYTVK|WI 0.065 . PCHAS_1419400 64 WITFINR|KV 0.100 . PCHAS_1419400 65 ITFINRK|VP 0.060 . PCHAS_1419400 73 PILLQNK|NG 0.050 . PCHAS_1419400 89 ANILLLR|NQ 0.070 . PCHAS_1419400 96 NQLHIDK|KI 0.057 . PCHAS_1419400 97 QLHIDKK|IK 0.108 . PCHAS_1419400 99 HIDKKIK|KI 0.079 . PCHAS_1419400 100 IDKKIKK|IS 0.122 . PCHAS_1419400 104 IKKISQK|VL 0.083 . PCHAS_1419400 109 QKVLEDK|II 0.076 . PCHAS_1419400 119 ILLESNK|KN 0.058 . PCHAS_1419400 120 LLESNKK|NV 0.091 . PCHAS_1419400 132 SASCNYR|KN 0.106 . PCHAS_1419400 133 ASCNYRK|NI 0.100 . PCHAS_1419400 146 DILPQLK|YG 0.057 . PCHAS_1419400 154 GLDVNCK|FT 0.074 . PCHAS_1419400 165 QSFEYTK|GL 0.064 . PCHAS_1419400 188 VISSDDK|MF 0.071 . PCHAS_1419400 195 MFYPYLK|DY 0.068 . PCHAS_1419400 205 YNVIINK|VI 0.060 . PCHAS_1419400 208 IINKVIK|YN 0.087 . PCHAS_1419400 215 YNEYYEK|KK 0.059 . PCHAS_1419400 216 NEYYEKK|KK 0.084 . PCHAS_1419400 217 EYYEKKK|KA 0.117 . PCHAS_1419400 218 YYEKKKK|AM 0.127 . PCHAS_1419400 229 DESSNEK|LI 0.063 . PCHAS_1419400 253 GNSGPPK|KI 0.092 . PCHAS_1419400 254 NSGPPKK|IE 0.101 . PCHAS_1419400 270 NDMIISK|DN 0.067 . PCHAS_1419400 277 DNPNISK|TL 0.061 . PCHAS_1419400 282 SKTLEFK|TR 0.067 . PCHAS_1419400 284 TLEFKTR|EQ 0.115 . PCHAS_1419400 307 TNSSSHK|NE 0.071 . PCHAS_1419400 310 SSHKNEK|IM 0.066 . PCHAS_1419400 313 KNEKIMK|SH 0.113 . PCHAS_1419400 328 FPDDLDK|NM 0.067 . PCHAS_1419400 335 NMDDNLK|TN 0.059 . PCHAS_1419400 361 PWEETGK|TD 0.058 . PCHAS_1419400 366 GKTDFNR|RF 0.097 . PCHAS_1419400 367 KTDFNRR|FF 0.153 . PCHAS_1419400 393 HNIGNNK|SN 0.078 . PCHAS_1419400 411 NDNSNGK|KN 0.065 . PCHAS_1419400 412 DNSNGKK|NT 0.126 . PCHAS_1419400 421 IISGFLK|RD 0.063 . PCHAS_1419400 422 ISGFLKR|DK 0.232 . PCHAS_1419400 424 GFLKRDK|KN 0.067 . PCHAS_1419400 425 FLKRDKK|NN 0.188 . PCHAS_1419400 428 RDKKNNK|GD 0.069 . PCHAS_1419400 431 KNNKGDK|TE 0.061 . PCHAS_1419400 442 NPEWINK|AG 0.062 . PCHAS_1419400 448 KAGDVLK|KK 0.065 . PCHAS_1419400 449 AGDVLKK|KK 0.084 . PCHAS_1419400 450 GDVLKKK|KE 0.090 . PCHAS_1419400 451 DVLKKKK|ES 0.094 . PCHAS_1419400 464 FSSQLNK|KT 0.073 . PCHAS_1419400 465 SSQLNKK|TK 0.096 . PCHAS_1419400 467 QLNKKTK|KK 0.097 . PCHAS_1419400 468 LNKKTKK|KD 0.098 . PCHAS_1419400 469 NKKTKKK|DK 0.193 . PCHAS_1419400 471 KTKKKDK|QT 0.074 . PCHAS_1419400 482 DDENINK|EI 0.061 . PCHAS_1419400 490 INNEDIK|QP 0.065 . PCHAS_1419400 494 DIKQPLK|IE 0.053 . PCHAS_1419400 502 EYINSEK|NK 0.056 . PCHAS_1419400 504 INSEKNK|ID 0.093 . PCHAS_1419400 509 NKIDTPK|FP 0.095 . PCHAS_1419400 522 SASENFK|TN 0.075 . PCHAS_1419400 529 TNSFSFK|SD 0.099 . PCHAS_1419400 549 NYEVFGK|GN 0.068 . PCHAS_1419400 552 VFGKGNK|KK 0.053 . PCHAS_1419400 553 FGKGNKK|KN 0.098 . PCHAS_1419400 554 GKGNKKK|NS 0.177 . PCHAS_1419400 559 KKNSTNK|VH 0.067 . PCHAS_1419400 571 IIDNDNK|YK 0.072 . PCHAS_1419400 573 DNDNKYK|EH 0.065 . PCHAS_1419400 606 EFLEVYK|TQ 0.054 . PCHAS_1419400 615 LTLVGLK|LL 0.056 . PCHAS_1419400 631 QLVAFFR|NN 0.087 . PCHAS_1419400 640 HFNTLFK|YN 0.070 . PCHAS_1419400 658 ISFLHLR|CT 0.099 . PCHAS_1419400 679 YCDNNFK|CI 0.061 . PCHAS_1419400 707 ENINNLK|GD 0.072 . PCHAS_1419400 723 SAYLNNK|KK 0.062 . PCHAS_1419400 724 AYLNNKK|KK 0.078 . PCHAS_1419400 725 YLNNKKK|KK 0.111 . PCHAS_1419400 726 LNNKKKK|KK 0.180 . PCHAS_1419400 727 NNKKKKK|KC 0.126 . PCHAS_1419400 728 NKKKKKK|CT 0.150 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1419400 ATGTCATCGTGGTTAAAACATAATTATGATGAAAACAGCGATGAAGAAGAAAATATTATA GTTCGGTTCGCCGACTATGAGACCTTTAAGTCTTATGTATTAAATAAATATGATAAAACA CATAAATCGCACAATTATCAAACGGATAATATATATTTTTATACAGTTAAATGGATTACT TTTATAAATAGGAAAGTTCCGATTTTACTTCAAAATAAAAATGGAGCATGCCCTCTGTTA TGTATAGCTAATATACTACTATTACGAAATCAATTACATATAGATAAAAAAATTAAAAAA ATATCTCAAAAAGTATTAGAAGACAAAATAATAAGTATATTATTGGAATCAAATAAAAAA AATGTAACAAATAATAGTGCTTCATGTAATTATAGAAAAAATATAATTGAATGTATAGAT ATATTACCACAATTAAAATATGGATTAGATGTAAATTGTAAATTTACAGATATCCAATCA TTTGAATATACTAAAGGGTTATGTATATTTGATATGTTAAATATTCCACTATATCATGGG TGGGTAATATCATCTGATGATAAAATGTTTTATCCTTATTTAAAGGATTACTCCTATAAT GTCATTATCAATAAAGTTATTAAATATAATGAATATTATGAAAAAAAAAAAAAAGCTATG TCTGCAGACGAATCATCAAATGAAAAATTGATAATTATGTCACAGGCCCTAAATTTATAT TTTGAAAGTGATGATGGAGGAAATTCTGGCCCTCCAAAAAAAATAGAAGAAAATAATAAT ATCCATATAAATGATATGATTATTTCGAAAGATAATCCAAATATAAGTAAAACATTAGAA TTTAAAACACGTGAACAAATAAATACAATACCTATTGAAAATGCTAACTCGAGTTTTAAC ACAAACTCTTCTAGCCACAAAAATGAAAAAATAATGAAATCCCATAGCGCTAGCATACCT ATATTTCCTGATGATTTGGATAAAAATATGGACGATAATCTTAAAACAAATATGGATCAA AATCCGGTTCTTAATTTAGGTAACTATAATGTTGATCATGATCCTTGGGAAGAAACGGGC AAAACGGATTTCAATAGGCGATTTTTTAATGCCAATCAAAATTTATATAACAATGAAATA GCAACAAATAATAATAATCATAATATAGGCAATAATAAAAGTAATGCAAATCAAAATAAT GTTAACAATAATAATGATAATTCTAATGGGAAAAAAAATACTATTATCTCGGGCTTTTTG AAAAGGGATAAAAAAAATAATAAAGGTGATAAAACAGAAGTAAGTAATCCCGAATGGATA AATAAAGCTGGAGATGTATTAAAAAAAAAAAAAGAATCTTTAACACTTTTATTTTCGTCT CAATTAAATAAAAAAACTAAAAAGAAGGATAAGCAAACCGCAACTGATGATGAAAATATA AATAAAGAAATTAATAATGAAGATATAAAACAACCTTTAAAAATCGAATATATTAATAGC GAAAAAAATAAAATAGATACCCCTAAATTTCCAGATGATATTATATCCGCTAGTGAAAAT TTTAAAACAAATTCATTTTCATTTAAATCGGATATTTTAGACACTAGCGTAAATAATATT GATACAAATTATGAGGTATTTGGAAAAGGGAATAAAAAGAAAAATTCAACTAATAAAGTG CATTATGAAAATATTATAGATAATGATAATAAATATAAAGAACATATAATTATAAATAAT TATAATACTAATGTCAATTTAACACCACATGAGTTTCATGAAGCATTAATTATACTTGAA TTTTTAGAAGTTTATAAAACCCAGTTAACATTAGTTGGCTTGAAGTTATTACAAGAAAAT TTAAATGCTAATCAATTAGTGGCATTTTTTAGAAATAACCATTTTAATACTCTTTTTAAA TATAACAATCAATTATTTTTATTAGTTGGAGATATTTCTTTTTTGCATTTAAGATGCACA TGGGAATTATTTGATAGTGTAACTAATGACACTACTTATTGTGATAATAATTTTAAATGT ATAACAGGAGATGATATGTCAAATTTTTTCAATCAACATATATCAATTTTAAACAGTTTT GAAAACATTAATAATTTGAAAGGAGATATGCAATCCCTAAATGCATACTCAGCCTATTTA AATAATAAAAAAAAAAAAAAAAAATGTACAATCATGTAG
  • Download Fasta

  • Fasta :-

    MSSWLKHNYDENSDEEENIIVRFADYETFKSYVLNKYDKTHKSHNYQTDNIYFYTVKWIT FINRKVPILLQNKNGACPLLCIANILLLRNQLHIDKKIKKISQKVLEDKIISILLESNKK NVTNNSASCNYRKNIIECIDILPQLKYGLDVNCKFTDIQSFEYTKGLCIFDMLNIPLYHG WVISSDDKMFYPYLKDYSYNVIINKVIKYNEYYEKKKKAMSADESSNEKLIIMSQALNLY FESDDGGNSGPPKKIEENNNIHINDMIISKDNPNISKTLEFKTREQINTIPIENANSSFN TNSSSHKNEKIMKSHSASIPIFPDDLDKNMDDNLKTNMDQNPVLNLGNYNVDHDPWEETG KTDFNRRFFNANQNLYNNEIATNNNNHNIGNNKSNANQNNVNNNNDNSNGKKNTIISGFL KRDKKNNKGDKTEVSNPEWINKAGDVLKKKKESLTLLFSSQLNKKTKKKDKQTATDDENI NKEINNEDIKQPLKIEYINSEKNKIDTPKFPDDIISASENFKTNSFSFKSDILDTSVNNI DTNYEVFGKGNKKKNSTNKVHYENIIDNDNKYKEHIIINNYNTNVNLTPHEFHEALIILE FLEVYKTQLTLVGLKLLQENLNANQLVAFFRNNHFNTLFKYNNQLFLLVGDISFLHLRCT WELFDSVTNDTTYCDNNFKCITGDDMSNFFNQHISILNSFENINNLKGDMQSLNAYSAYL NNKKKKKKCTIM

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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1419400102 SIKKISQKVL0.991unspPCHAS_1419400221 SKKAMSADES0.997unsp

PCHAS_141940      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India