PCHAS_1427150 | GTP-binding protein YihA3, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1427150SP0.2911100.7023610.006529CS pos: 25-26. VLS-WC. Pr: 0.6374
No Results

  • Fasta :-

    >PCHAS_1427150 MLNAKTSRIYCILFILFLCINTVLSWCFIHIKSQTKSLDYPRTRIYENINKKEDLEYKAF KNVSFNKLKTSLKNFLVVNKKINISDVKYVSFLGKYYNYEKIDNYGVNEICILGRSNVGK STFLRNFIKYLINVNDNTNIKVSKRSGCTRSINLYSFENAKKKKLFILTDMPGLGYAEGI GEKKMEYLKKNLDDYVYLRNQICLFFILIDMSVDIQKIDISLVDAIRKTGIPLRVICTKC DKFNGDVNHRLNGIKTFYKLEKTPIHISKFSNHNYINIFKEIQYHCNLGNS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1427150.fa Sequence name : PCHAS_1427150 Sequence length : 291 VALUES OF COMPUTED PARAMETERS Coef20 : 4.939 CoefTot : 0.298 ChDiff : 22 ZoneTo : 38 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.182 2.453 0.549 0.805 MesoH : -1.284 0.307 -0.487 0.167 MuHd_075 : 18.193 21.871 8.110 4.784 MuHd_095 : 18.930 19.451 8.302 4.559 MuHd_100 : 18.429 17.628 7.564 5.411 MuHd_105 : 21.276 16.735 5.407 5.808 Hmax_075 : 17.267 25.400 6.196 7.990 Hmax_095 : 17.937 27.100 6.337 6.140 Hmax_100 : 11.800 29.100 3.195 8.600 Hmax_105 : 18.100 23.712 0.996 7.790 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7625 0.2375 DFMC : 0.8190 0.1810
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 291 PCHAS_1427150 MLNAKTSRIYCILFILFLCINTVLSWCFIHIKSQTKSLDYPRTRIYENINKKEDLEYKAFKNVSFNKLKTSLKNFLVVNK 80 KINISDVKYVSFLGKYYNYEKIDNYGVNEICILGRSNVGKSTFLRNFIKYLINVNDNTNIKVSKRSGCTRSINLYSFENA 160 KKKKLFILTDMPGLGYAEGIGEKKMEYLKKNLDDYVYLRNQICLFFILIDMSVDIQKIDISLVDAIRKTGIPLRVICTKC 240 DKFNGDVNHRLNGIKTFYKLEKTPIHISKFSNHNYINIFKEIQYHCNLGNS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1427150 5 --MLNAK|TS 0.058 . PCHAS_1427150 8 LNAKTSR|IY 0.106 . PCHAS_1427150 32 WCFIHIK|SQ 0.087 . PCHAS_1427150 36 HIKSQTK|SL 0.082 . PCHAS_1427150 42 KSLDYPR|TR 0.071 . PCHAS_1427150 44 LDYPRTR|IY 0.101 . PCHAS_1427150 51 IYENINK|KE 0.056 . PCHAS_1427150 52 YENINKK|ED 0.078 . PCHAS_1427150 58 KEDLEYK|AF 0.060 . PCHAS_1427150 61 LEYKAFK|NV 0.076 . PCHAS_1427150 67 KNVSFNK|LK 0.061 . PCHAS_1427150 69 VSFNKLK|TS 0.063 . PCHAS_1427150 73 KLKTSLK|NF 0.059 . PCHAS_1427150 80 NFLVVNK|KI 0.061 . PCHAS_1427150 81 FLVVNKK|IN 0.083 . PCHAS_1427150 88 INISDVK|YV 0.083 . PCHAS_1427150 95 YVSFLGK|YY 0.072 . PCHAS_1427150 101 KYYNYEK|ID 0.060 . PCHAS_1427150 115 EICILGR|SN 0.104 . PCHAS_1427150 120 GRSNVGK|ST 0.132 . PCHAS_1427150 125 GKSTFLR|NF 0.128 . PCHAS_1427150 129 FLRNFIK|YL 0.078 . PCHAS_1427150 141 NDNTNIK|VS 0.061 . PCHAS_1427150 144 TNIKVSK|RS 0.071 . PCHAS_1427150 145 NIKVSKR|SG 0.258 . PCHAS_1427150 150 KRSGCTR|SI 0.173 . PCHAS_1427150 161 YSFENAK|KK 0.057 . PCHAS_1427150 162 SFENAKK|KK 0.095 . PCHAS_1427150 163 FENAKKK|KL 0.133 . PCHAS_1427150 164 ENAKKKK|LF 0.098 . PCHAS_1427150 183 AEGIGEK|KM 0.056 . PCHAS_1427150 184 EGIGEKK|ME 0.072 . PCHAS_1427150 189 KKMEYLK|KN 0.056 . PCHAS_1427150 190 KMEYLKK|NL 0.132 . PCHAS_1427150 199 DDYVYLR|NQ 0.074 . PCHAS_1427150 217 MSVDIQK|ID 0.061 . PCHAS_1427150 227 SLVDAIR|KT 0.093 . PCHAS_1427150 228 LVDAIRK|TG 0.067 . PCHAS_1427150 234 KTGIPLR|VI 0.093 . PCHAS_1427150 239 LRVICTK|CD 0.067 . PCHAS_1427150 242 ICTKCDK|FN 0.075 . PCHAS_1427150 250 NGDVNHR|LN 0.085 . PCHAS_1427150 255 HRLNGIK|TF 0.073 . PCHAS_1427150 259 GIKTFYK|LE 0.060 . PCHAS_1427150 262 TFYKLEK|TP 0.065 . PCHAS_1427150 269 TPIHISK|FS 0.085 . PCHAS_1427150 280 NYINIFK|EI 0.059 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1427150 ATGCTAAATGCCAAAACTAGTAGAATTTATTGTATCCTTTTTATTTTGTTTTTATGCATT AACACCGTTCTCTCATGGTGTTTTATACATATCAAGTCTCAAACCAAATCTTTGGATTAT CCCAGAACAAGAATATATGAAAATATAAATAAAAAAGAAGACCTAGAATACAAAGCCTTT AAAAACGTCAGTTTTAATAAACTTAAAACAAGTTTAAAAAATTTCCTCGTTGTAAACAAA AAAATTAACATATCCGATGTTAAGTATGTTTCTTTTCTAGGTAAATATTACAATTATGAA AAAATCGATAACTATGGAGTTAATGAAATATGCATATTAGGAAGGAGTAATGTTGGGAAA TCTACATTTTTAAGAAATTTCATAAAGTATCTTATAAACGTAAATGATAATACAAACATT AAAGTGTCAAAACGTAGTGGATGCACAAGATCAATAAATTTATATTCCTTTGAAAATGCA AAAAAAAAAAAATTGTTTATTCTAACGGATATGCCAGGTTTAGGTTATGCAGAAGGAATT GGGGAAAAAAAAATGGAATATTTGAAAAAAAACTTAGATGATTATGTATACTTAAGAAAT CAAATTTGTTTATTTTTTATATTAATTGATATGAGTGTTGATATCCAAAAAATAGATATC TCTTTGGTGGATGCTATTCGAAAAACGGGTATCCCACTTCGTGTCATCTGCACCAAATGC GACAAATTCAATGGGGATGTTAACCATCGGCTTAACGGAATAAAAACTTTTTATAAACTT GAAAAAACTCCCATACATATATCAAAATTTTCCAATCACAACTATATAAACATATTTAAA GAAATTCAGTATCATTGCAATTTGGGTAATTCATAA
  • Download Fasta

  • Fasta :-

    MLNAKTSRIYCILFILFLCINTVLSWCFIHIKSQTKSLDYPRTRIYENINKKEDLEYKAF KNVSFNKLKTSLKNFLVVNKKINISDVKYVSFLGKYYNYEKIDNYGVNEICILGRSNVGK STFLRNFIKYLINVNDNTNIKVSKRSGCTRSINLYSFENAKKKKLFILTDMPGLGYAEGI GEKKMEYLKKNLDDYVYLRNQICLFFILIDMSVDIQKIDISLVDAIRKTGIPLRVICTKC DKFNGDVNHRLNGIKTFYKLEKTPIHISKFSNHNYINIFKEIQYHCNLGNS

  • title: GTP/Mg2+ binding site
  • coordinates: S116,N117,V118,G119,K120,S121,T122,G173,T238,K239,D241,S271,N272,H273
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_1427150143 SNIKVSKRSG0.994unsp

PCHAS_142715      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India