PCHAS_1451300 | microgamete surface protein MiGS, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0009986      GO:0044310      

  • Curated_GO_Components:  cell surface      osmiophilic body      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1451300SP0.0100140.9898680.000118CS pos: 23-24. TDC-YS. Pr: 0.8263
No Results

  • Fasta :-

    >PCHAS_1451300 MSQRYIVLLHCVFLLLSLFKTDCYSLQSHSNSKAKHSHNSGCVHGKVGVLRSIGKRDHRA NSSFLRVQDDEATDFYNLKLHEKNFRWSLPLALGSEKSVVDLVLTLGNSSTAFYCHDETK PASETDVLAYDLSKSKDLKYVDCKSAECTEILGSNKCLVLDEYFKQLKGYTLRKKNCKSK LCDYVTSMNFLSMNDPSVDKNASVCPFDHKIDSEQIKGFYFNDSFLINKDKKITYDYFGC ITENKSLNINADTYGVIGLTNNHQADKKYSSILNSFVSNSASKKNIFGLCLIEGGGFISF GGHDKAALGPVPPPKEAVDTALDTSDYDDSDLTYKNTLLSVNESDGLIWVDYAGPTTESY KIKVTKINFNVTDDSSEHKIDKEFTLDTYDYFISLPKEVSTKLTEQIDKICKGLGEKCKY TKESGSFQMASEHLGSFPILEFSFGEHKVMVHPQDYIIDNGGNNYKVLVKHAESNGHLGV PFFLNKYIIFDNEKKKLGIAQSKCQTANAFEPTPSAGKVPEKPKVPEKDKVPGEVIVVPG EDKGPGEHKEPGEVVVVPEDGEDKGFYEKNKTAILAISGVAISGSIIGSIFYLL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1451300.fa Sequence name : PCHAS_1451300 Sequence length : 594 VALUES OF COMPUTED PARAMETERS Coef20 : 4.679 CoefTot : -1.360 ChDiff : -9 ZoneTo : 56 KR : 8 DE : 1 CleavSite : 61 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.953 2.012 0.453 0.739 MesoH : -0.643 0.024 -0.431 0.199 MuHd_075 : 34.067 16.144 7.687 8.051 MuHd_095 : 22.835 17.598 8.189 5.376 MuHd_100 : 16.201 18.664 6.526 4.636 MuHd_105 : 21.315 20.407 7.677 5.918 Hmax_075 : 13.883 16.567 4.970 4.888 Hmax_095 : 5.800 10.300 1.445 3.350 Hmax_100 : -0.800 17.400 3.703 3.760 Hmax_105 : 18.000 18.083 4.437 7.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3436 0.6564 DFMC : 0.5397 0.4603
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 594 PCHAS_1451300 MSQRYIVLLHCVFLLLSLFKTDCYSLQSHSNSKAKHSHNSGCVHGKVGVLRSIGKRDHRANSSFLRVQDDEATDFYNLKL 80 HEKNFRWSLPLALGSEKSVVDLVLTLGNSSTAFYCHDETKPASETDVLAYDLSKSKDLKYVDCKSAECTEILGSNKCLVL 160 DEYFKQLKGYTLRKKNCKSKLCDYVTSMNFLSMNDPSVDKNASVCPFDHKIDSEQIKGFYFNDSFLINKDKKITYDYFGC 240 ITENKSLNINADTYGVIGLTNNHQADKKYSSILNSFVSNSASKKNIFGLCLIEGGGFISFGGHDKAALGPVPPPKEAVDT 320 ALDTSDYDDSDLTYKNTLLSVNESDGLIWVDYAGPTTESYKIKVTKINFNVTDDSSEHKIDKEFTLDTYDYFISLPKEVS 400 TKLTEQIDKICKGLGEKCKYTKESGSFQMASEHLGSFPILEFSFGEHKVMVHPQDYIIDNGGNNYKVLVKHAESNGHLGV 480 PFFLNKYIIFDNEKKKLGIAQSKCQTANAFEPTPSAGKVPEKPKVPEKDKVPGEVIVVPGEDKGPGEHKEPGEVVVVPED 560 GEDKGFYEKNKTAILAISGVAISGSIIGSIFYLL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1451300 4 ---MSQR|YI 0.086 . PCHAS_1451300 20 LLLSLFK|TD 0.062 . PCHAS_1451300 33 QSHSNSK|AK 0.069 . PCHAS_1451300 35 HSNSKAK|HS 0.103 . PCHAS_1451300 46 SGCVHGK|VG 0.057 . PCHAS_1451300 51 GKVGVLR|SI 0.224 . PCHAS_1451300 55 VLRSIGK|RD 0.064 . PCHAS_1451300 56 LRSIGKR|DH 0.292 . PCHAS_1451300 59 IGKRDHR|AN 0.231 . PCHAS_1451300 66 ANSSFLR|VQ 0.120 . PCHAS_1451300 79 TDFYNLK|LH 0.070 . PCHAS_1451300 83 NLKLHEK|NF 0.067 . PCHAS_1451300 86 LHEKNFR|WS 0.080 . PCHAS_1451300 97 LALGSEK|SV 0.092 . PCHAS_1451300 120 YCHDETK|PA 0.075 . PCHAS_1451300 134 LAYDLSK|SK 0.072 . PCHAS_1451300 136 YDLSKSK|DL 0.064 . PCHAS_1451300 139 SKSKDLK|YV 0.109 . PCHAS_1451300 144 LKYVDCK|SA 0.106 . PCHAS_1451300 156 EILGSNK|CL 0.056 . PCHAS_1451300 165 VLDEYFK|QL 0.056 . PCHAS_1451300 168 EYFKQLK|GY 0.058 . PCHAS_1451300 173 LKGYTLR|KK 0.075 . PCHAS_1451300 174 KGYTLRK|KN 0.081 . PCHAS_1451300 175 GYTLRKK|NC 0.087 . PCHAS_1451300 178 LRKKNCK|SK 0.081 . PCHAS_1451300 180 KKNCKSK|LC 0.082 . PCHAS_1451300 200 NDPSVDK|NA 0.067 . PCHAS_1451300 210 VCPFDHK|ID 0.068 . PCHAS_1451300 217 IDSEQIK|GF 0.077 . PCHAS_1451300 229 DSFLINK|DK 0.063 . PCHAS_1451300 231 FLINKDK|KI 0.066 . PCHAS_1451300 232 LINKDKK|IT 0.141 . PCHAS_1451300 245 GCITENK|SL 0.082 . PCHAS_1451300 267 NNHQADK|KY 0.080 . PCHAS_1451300 268 NHQADKK|YS 0.107 . PCHAS_1451300 283 VSNSASK|KN 0.067 . PCHAS_1451300 284 SNSASKK|NI 0.140 . PCHAS_1451300 305 SFGGHDK|AA 0.064 . PCHAS_1451300 315 GPVPPPK|EA 0.074 . PCHAS_1451300 335 DSDLTYK|NT 0.057 . PCHAS_1451300 361 PTTESYK|IK 0.060 . PCHAS_1451300 363 TESYKIK|VT 0.096 . PCHAS_1451300 366 YKIKVTK|IN 0.081 . PCHAS_1451300 379 DDSSEHK|ID 0.062 . PCHAS_1451300 382 SEHKIDK|EF 0.061 . PCHAS_1451300 397 YFISLPK|EV 0.084 . PCHAS_1451300 402 PKEVSTK|LT 0.076 . PCHAS_1451300 409 LTEQIDK|IC 0.056 . PCHAS_1451300 412 QIDKICK|GL 0.070 . PCHAS_1451300 417 CKGLGEK|CK 0.064 . PCHAS_1451300 419 GLGEKCK|YT 0.084 . PCHAS_1451300 422 EKCKYTK|ES 0.072 . PCHAS_1451300 448 FSFGEHK|VM 0.053 . PCHAS_1451300 466 NGGNNYK|VL 0.059 . PCHAS_1451300 470 NYKVLVK|HA 0.073 . PCHAS_1451300 486 VPFFLNK|YI 0.064 . PCHAS_1451300 494 IIFDNEK|KK 0.055 . PCHAS_1451300 495 IFDNEKK|KL 0.102 . PCHAS_1451300 496 FDNEKKK|LG 0.107 . PCHAS_1451300 503 LGIAQSK|CQ 0.064 . PCHAS_1451300 518 PTPSAGK|VP 0.050 . PCHAS_1451300 522 AGKVPEK|PK 0.064 . PCHAS_1451300 524 KVPEKPK|VP 0.060 . PCHAS_1451300 528 KPKVPEK|DK 0.099 . PCHAS_1451300 530 KVPEKDK|VP 0.066 . PCHAS_1451300 543 VVPGEDK|GP 0.060 . PCHAS_1451300 549 KGPGEHK|EP 0.069 . PCHAS_1451300 564 PEDGEDK|GF 0.064 . PCHAS_1451300 569 DKGFYEK|NK 0.064 . PCHAS_1451300 571 GFYEKNK|TA 0.080 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1451300 ATGTCTCAAAGATATATAGTACTCCTTCATTGCGTTTTTCTCCTCCTGAGTTTGTTTAAA ACAGATTGCTATTCATTACAATCTCACAGCAATTCGAAAGCAAAGCATTCTCACAATAGT GGCTGTGTACATGGAAAGGTTGGAGTTTTAAGAAGCATAGGAAAAAGAGATCATAGGGCA AATAGTTCTTTCTTAAGGGTACAAGATGATGAAGCTACCGATTTCTATAATCTCAAATTA CATGAAAAGAATTTTAGATGGAGTTTACCTTTAGCTTTAGGATCAGAAAAATCAGTCGTT GATTTAGTTTTAACACTTGGTAATTCATCTACTGCATTCTATTGCCATGATGAAACAAAG CCCGCTTCAGAAACTGATGTATTAGCATATGATTTATCAAAGTCCAAAGATTTAAAATAT GTTGATTGCAAAAGTGCAGAATGTACTGAAATCTTAGGATCTAATAAATGCTTAGTTTTA GATGAATATTTTAAACAATTAAAAGGATATACCTTAAGAAAAAAAAATTGTAAAAGTAAA TTATGCGATTATGTAACTAGCATGAACTTCTTAAGCATGAACGACCCATCTGTTGATAAA AATGCATCTGTATGTCCATTTGATCACAAAATTGATAGCGAACAAATTAAAGGGTTTTAT TTTAATGATTCCTTTTTAATTAATAAAGACAAAAAAATAACATATGATTACTTTGGATGT ATAACAGAAAATAAAAGTTTAAATATTAATGCAGATACATATGGTGTTATTGGATTAACT AATAATCATCAAGCTGATAAGAAATATTCATCTATTTTAAACTCTTTTGTTTCAAATTCG GCATCAAAAAAAAATATATTTGGTTTATGTTTAATTGAAGGAGGTGGATTTATTTCTTTT GGTGGACATGACAAAGCAGCTTTAGGCCCTGTTCCACCTCCAAAAGAAGCAGTAGATACA GCTTTAGATACAAGTGATTATGATGATTCAGATTTGACTTACAAAAATACATTATTATCT GTAAATGAATCCGATGGTTTGATTTGGGTCGATTATGCTGGACCAACAACTGAATCATAC AAAATAAAAGTAACAAAAATCAATTTTAATGTAACTGATGATAGTTCAGAACACAAAATT GATAAAGAATTTACTCTTGACACATATGACTATTTCATATCATTACCAAAAGAAGTATCA ACTAAGCTTACAGAACAAATTGATAAAATATGCAAAGGCTTAGGTGAAAAATGTAAATAC ACTAAAGAATCTGGATCATTCCAAATGGCAAGTGAACACTTAGGTTCTTTCCCAATCTTA GAATTTTCTTTCGGTGAACACAAAGTGATGGTCCATCCACAAGATTACATAATAGATAAC GGAGGCAACAATTACAAAGTTTTAGTAAAACACGCTGAAAGCAATGGACACCTCGGAGTT CCATTTTTCTTAAACAAATACATTATATTTGACAACGAAAAAAAAAAATTAGGTATTGCA CAATCTAAATGTCAAACCGCCAACGCATTTGAGCCAACCCCCTCTGCTGGAAAAGTACCA GAAAAACCTAAAGTACCAGAAAAAGATAAAGTACCAGGAGAAGTTATCGTAGTACCAGGT GAAGATAAAGGACCAGGAGAACACAAAGAACCAGGTGAAGTTGTTGTAGTACCAGAGGAT GGTGAAGATAAAGGCTTTTATGAAAAAAATAAAACAGCCATATTAGCAATTTCTGGTGTT GCAATTTCAGGATCCATTATTGGAAGTATTTTTTATCTTTTATAA
  • Download Fasta

  • Fasta :-

    MSQRYIVLLHCVFLLLSLFKTDCYSLQSHSNSKAKHSHNSGCVHGKVGVLRSIGKRDHRA NSSFLRVQDDEATDFYNLKLHEKNFRWSLPLALGSEKSVVDLVLTLGNSSTAFYCHDETK PASETDVLAYDLSKSKDLKYVDCKSAECTEILGSNKCLVLDEYFKQLKGYTLRKKNCKSK LCDYVTSMNFLSMNDPSVDKNASVCPFDHKIDSEQIKGFYFNDSFLINKDKKITYDYFGC ITENKSLNINADTYGVIGLTNNHQADKKYSSILNSFVSNSASKKNIFGLCLIEGGGFISF GGHDKAALGPVPPPKEAVDTALDTSDYDDSDLTYKNTLLSVNESDGLIWVDYAGPTTESY KIKVTKINFNVTDDSSEHKIDKEFTLDTYDYFISLPKEVSTKLTEQIDKICKGLGEKCKY TKESGSFQMASEHLGSFPILEFSFGEHKVMVHPQDYIIDNGGNNYKVLVKHAESNGHLGV PFFLNKYIIFDNEKKKLGIAQSKCQTANAFEPTPSAGKVPEKPKVPEKDKVPGEVIVVPG EDKGPGEHKEPGEVVVVPEDGEDKGFYEKNKTAILAISGVAISGSIIGSIFYLL

  • title: Active site flap
  • coordinates: D208,H209,K210,E214,Q215,I216,K217
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1451300340 SNTLLSVNES0.991unspPCHAS_1451300340 SNTLLSVNES0.991unspPCHAS_1451300340 SNTLLSVNES0.991unspPCHAS_1451300123 STKPASETDV0.993unspPCHAS_1451300325 SALDTSDYDD0.996unsp

PCHAS_145130      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India