PCHAS_1456700 | 3-hydroxyisobutyryl-CoA hydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1456700OTHER0.7257700.0001310.274099
No Results

  • Fasta :-

    >PCHAS_1456700 MLNQRKCFHLSIFKLKNISHIKNLKWNEINFSDKNYLFTCTNFEKKKPNVKNLVTYENKN AKSFYKYSNNSNLHTNTQKIENNHKNVLSKKMENTNENINMNKRYISDEPNKGGNLRNAE NEKNNELDRYNMENMKDDIKSKNGNCDDIIDLTLSDVWSKKTLIVEYKNNIFEILLNRKE KLNAINKDMITGLLNMVKSLSNDDRCNLIVIRSINQNCFCSGSDVKDIVQNKEQGINHLK QLYKYINFISKINKNVLCIWNGYAMGGGLGISMYTKYRIINRNVIFAMPENKIGFFPDVG SCYFLKKYFPRNIALHIGLTSLRLNEMDLINFKVCTNYIENVDQFLNELYNIKKEDPDKF NEELIKILNKYPPNVNINAKPVLTEELISNIDKYYSSANTLEELINNLKKDEDNNNFCKQ LLSDINANCYFSCQLWFSYFIYNYDKSMEEVLDNDFKMTQYFLYHTNTFEKGVTEVLIKK NKNFQWSKDHENNPVQLEETIEDILMNKNLLSIKDEFI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1456700.fa Sequence name : PCHAS_1456700 Sequence length : 518 VALUES OF COMPUTED PARAMETERS Coef20 : 4.103 CoefTot : -0.887 ChDiff : 6 ZoneTo : 27 KR : 6 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.088 0.209 0.598 MesoH : -0.455 0.315 -0.345 0.238 MuHd_075 : 25.661 15.587 8.741 5.993 MuHd_095 : 24.953 15.579 10.324 4.026 MuHd_100 : 24.867 17.530 10.391 4.771 MuHd_105 : 24.728 21.040 10.804 5.332 Hmax_075 : 12.600 15.867 3.050 5.495 Hmax_095 : 8.700 9.100 1.775 1.750 Hmax_100 : 9.800 10.500 1.775 3.890 Hmax_105 : 6.500 13.400 1.683 3.990 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3376 0.6624 DFMC : 0.1855 0.8145 This protein is probably imported in mitochondria. f(Ser) = 0.0741 f(Arg) = 0.0370 CMi = 0.60790 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 518 PCHAS_1456700 MLNQRKCFHLSIFKLKNISHIKNLKWNEINFSDKNYLFTCTNFEKKKPNVKNLVTYENKNAKSFYKYSNNSNLHTNTQKI 80 ENNHKNVLSKKMENTNENINMNKRYISDEPNKGGNLRNAENEKNNELDRYNMENMKDDIKSKNGNCDDIIDLTLSDVWSK 160 KTLIVEYKNNIFEILLNRKEKLNAINKDMITGLLNMVKSLSNDDRCNLIVIRSINQNCFCSGSDVKDIVQNKEQGINHLK 240 QLYKYINFISKINKNVLCIWNGYAMGGGLGISMYTKYRIINRNVIFAMPENKIGFFPDVGSCYFLKKYFPRNIALHIGLT 320 SLRLNEMDLINFKVCTNYIENVDQFLNELYNIKKEDPDKFNEELIKILNKYPPNVNINAKPVLTEELISNIDKYYSSANT 400 LEELINNLKKDEDNNNFCKQLLSDINANCYFSCQLWFSYFIYNYDKSMEEVLDNDFKMTQYFLYHTNTFEKGVTEVLIKK 480 NKNFQWSKDHENNPVQLEETIEDILMNKNLLSIKDEFI 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1456700 5 --MLNQR|KC 0.068 . PCHAS_1456700 6 -MLNQRK|CF 0.075 . PCHAS_1456700 14 FHLSIFK|LK 0.051 . PCHAS_1456700 16 LSIFKLK|NI 0.093 . PCHAS_1456700 22 KNISHIK|NL 0.069 . PCHAS_1456700 25 SHIKNLK|WN 0.070 . PCHAS_1456700 34 EINFSDK|NY 0.060 . PCHAS_1456700 45 TCTNFEK|KK 0.060 . PCHAS_1456700 46 CTNFEKK|KP 0.085 . PCHAS_1456700 47 TNFEKKK|PN 0.130 . PCHAS_1456700 51 KKKPNVK|NL 0.062 . PCHAS_1456700 59 LVTYENK|NA 0.058 . PCHAS_1456700 62 YENKNAK|SF 0.096 . PCHAS_1456700 66 NAKSFYK|YS 0.072 . PCHAS_1456700 79 LHTNTQK|IE 0.060 . PCHAS_1456700 85 KIENNHK|NV 0.066 . PCHAS_1456700 90 HKNVLSK|KM 0.072 . PCHAS_1456700 91 KNVLSKK|ME 0.121 . PCHAS_1456700 103 ENINMNK|RY 0.064 . PCHAS_1456700 104 NINMNKR|YI 0.312 . PCHAS_1456700 112 ISDEPNK|GG 0.057 . PCHAS_1456700 117 NKGGNLR|NA 0.125 . PCHAS_1456700 123 RNAENEK|NN 0.064 . PCHAS_1456700 129 KNNELDR|YN 0.108 . PCHAS_1456700 136 YNMENMK|DD 0.071 . PCHAS_1456700 140 NMKDDIK|SK 0.069 . PCHAS_1456700 142 KDDIKSK|NG 0.057 . PCHAS_1456700 160 LSDVWSK|KT 0.062 . PCHAS_1456700 161 SDVWSKK|TL 0.109 . PCHAS_1456700 168 TLIVEYK|NN 0.065 . PCHAS_1456700 178 FEILLNR|KE 0.058 . PCHAS_1456700 179 EILLNRK|EK 0.061 . PCHAS_1456700 181 LLNRKEK|LN 0.164 . PCHAS_1456700 187 KLNAINK|DM 0.082 . PCHAS_1456700 198 GLLNMVK|SL 0.079 . PCHAS_1456700 205 SLSNDDR|CN 0.135 . PCHAS_1456700 212 CNLIVIR|SI 0.129 . PCHAS_1456700 226 CSGSDVK|DI 0.074 . PCHAS_1456700 232 KDIVQNK|EQ 0.066 . PCHAS_1456700 240 QGINHLK|QL 0.072 . PCHAS_1456700 244 HLKQLYK|YI 0.074 . PCHAS_1456700 251 YINFISK|IN 0.067 . PCHAS_1456700 254 FISKINK|NV 0.081 . PCHAS_1456700 276 GISMYTK|YR 0.073 . PCHAS_1456700 278 SMYTKYR|II 0.095 . PCHAS_1456700 282 KYRIINR|NV 0.116 . PCHAS_1456700 292 FAMPENK|IG 0.056 . PCHAS_1456700 306 GSCYFLK|KY 0.066 . PCHAS_1456700 307 SCYFLKK|YF 0.110 . PCHAS_1456700 311 LKKYFPR|NI 0.107 . PCHAS_1456700 323 IGLTSLR|LN 0.077 . PCHAS_1456700 333 MDLINFK|VC 0.056 . PCHAS_1456700 353 NELYNIK|KE 0.057 . PCHAS_1456700 354 ELYNIKK|ED 0.090 . PCHAS_1456700 359 KKEDPDK|FN 0.075 . PCHAS_1456700 366 FNEELIK|IL 0.069 . PCHAS_1456700 370 LIKILNK|YP 0.060 . PCHAS_1456700 380 NVNINAK|PV 0.094 . PCHAS_1456700 393 LISNIDK|YY 0.087 . PCHAS_1456700 409 ELINNLK|KD 0.058 . PCHAS_1456700 410 LINNLKK|DE 0.140 . PCHAS_1456700 419 DNNNFCK|QL 0.067 . PCHAS_1456700 446 FIYNYDK|SM 0.086 . PCHAS_1456700 457 VLDNDFK|MT 0.065 . PCHAS_1456700 471 HTNTFEK|GV 0.101 . PCHAS_1456700 479 VTEVLIK|KN 0.057 . PCHAS_1456700 480 TEVLIKK|NK 0.073 . PCHAS_1456700 482 VLIKKNK|NF 0.068 . PCHAS_1456700 488 KNFQWSK|DH 0.074 . PCHAS_1456700 508 EDILMNK|NL 0.058 . PCHAS_1456700 514 KNLLSIK|DE 0.067 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1456700 ATGCTAAATCAAAGGAAATGCTTTCATCTCAGTATATTCAAATTAAAAAATATTTCTCAC ATAAAAAATTTAAAATGGAATGAAATAAATTTTAGTGATAAAAACTATTTGTTTACATGT ACAAACTTTGAAAAGAAAAAACCAAACGTGAAAAATTTGGTGACTTATGAAAATAAAAAC GCAAAAAGTTTCTATAAATATTCCAATAATAGTAATTTACATACTAATACACAGAAAATA GAAAATAATCATAAAAATGTATTATCTAAAAAAATGGAAAATACAAATGAAAATATTAAT ATGAACAAGCGATATATATCTGACGAACCTAATAAAGGCGGCAATCTTAGGAATGCTGAA AATGAGAAAAATAATGAATTAGATAGATATAATATGGAAAATATGAAAGATGACATAAAA TCAAAGAATGGCAACTGTGATGATATTATAGATCTAACCCTATCTGATGTATGGTCAAAA AAAACATTAATAGTAGAATACAAAAACAACATATTCGAAATATTATTAAATAGGAAAGAA AAATTAAATGCTATAAATAAAGATATGATTACTGGATTATTGAATATGGTCAAAAGTTTA AGTAATGATGATAGATGCAATTTGATAGTAATAAGAAGCATCAACCAAAATTGTTTTTGC TCAGGCTCAGACGTAAAAGATATAGTTCAGAATAAAGAACAGGGGATAAATCATTTAAAA CAACTTTATAAGTATATTAATTTTATTTCAAAAATCAATAAAAATGTATTATGCATATGG AATGGATATGCTATGGGTGGGGGGCTAGGTATATCTATGTATACAAAATATCGAATCATA AATAGAAATGTAATATTTGCTATGCCAGAAAATAAAATAGGGTTTTTCCCTGATGTTGGA AGCTGCTATTTTTTAAAAAAATATTTTCCACGAAATATTGCTTTACACATAGGATTAACA TCATTGCGATTAAATGAAATGGATTTAATTAATTTTAAAGTGTGTACTAATTATATAGAA AATGTAGACCAATTCTTGAATGAATTATATAATATTAAAAAAGAAGACCCAGATAAATTT AATGAAGAACTTATTAAAATTTTAAATAAGTACCCTCCAAATGTTAATATTAATGCAAAA CCAGTATTAACAGAAGAATTAATTAGTAATATCGACAAGTATTATTCATCTGCCAATACT TTAGAGGAATTAATAAATAATTTAAAAAAAGATGAAGATAATAATAATTTTTGTAAACAA TTATTGTCAGATATAAACGCTAATTGTTATTTTAGCTGCCAATTATGGTTCTCATATTTT ATATATAACTATGACAAATCTATGGAAGAAGTATTAGATAACGATTTTAAAATGACCCAG TATTTTTTATATCACACTAATACATTTGAAAAGGGAGTAACTGAAGTATTAATAAAAAAA AATAAAAATTTTCAGTGGAGTAAGGATCACGAAAATAATCCTGTGCAATTGGAAGAAACT ATTGAAGATATTTTGATGAATAAAAATTTATTGTCTATTAAAGATGAATTTATATAA
  • Download Fasta

  • Fasta :-

    MLNQRKCFHLSIFKLKNISHIKNLKWNEINFSDKNYLFTCTNFEKKKPNVKNLVTYENKN AKSFYKYSNNSNLHTNTQKIENNHKNVLSKKMENTNENINMNKRYISDEPNKGGNLRNAE NEKNNELDRYNMENMKDDIKSKNGNCDDIIDLTLSDVWSKKTLIVEYKNNIFEILLNRKE KLNAINKDMITGLLNMVKSLSNDDRCNLIVIRSINQNCFCSGSDVKDIVQNKEQGINHLK QLYKYINFISKINKNVLCIWNGYAMGGGLGISMYTKYRIINRNVIFAMPENKIGFFPDVG SCYFLKKYFPRNIALHIGLTSLRLNEMDLINFKVCTNYIENVDQFLNELYNIKKEDPDKF NEELIKILNKYPPNVNINAKPVLTEELISNIDKYYSSANTLEELINNLKKDEDNNNFCKQ LLSDINANCYFSCQLWFSYFIYNYDKSMEEVLDNDFKMTQYFLYHTNTFEKGVTEVLIKK NKNFQWSKDHENNPVQLEETIEDILMNKNLLSIKDEFI

    No Results
  • title: substrate binding site
  • coordinates: L182,A184,N217,S221,G222,S223,D224,V225,Y263,M265,G266,G267,P289,E290,I293
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1456700107 SKRYISDEPN0.994unspPCHAS_1456700512 SKNLLSIKDE0.994unsp

PCHAS_145670      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India