PCHAS_1464100 | 26S protease regulatory subunit 8, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1464100OTHER0.9998420.0000500.000109
No Results

  • Fasta :-

    >PCHAS_1464100 MAAVDMQMRSGDLEGTKNENDKTNGNKNDEEMQSGIKTYYEMKIEEYESIINKKLQNKKR LEAQRNELNTRVRELRDEIQYLLEAASYVGEIAKPMGKNKVLVKINPEGKYVVDIASHID IAKCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEV IELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI GEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFES TQNIKVIMCTNRIDILDDALLRPGRIDRKIEFPNPNVEARIEILKIHSRKMNLMRGIDMV KIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKQDAEKNFTLRKLW K
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1464100.fa Sequence name : PCHAS_1464100 Sequence length : 421 VALUES OF COMPUTED PARAMETERS Coef20 : 3.365 CoefTot : 0.282 ChDiff : -3 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.335 0.788 -0.063 0.398 MesoH : -0.765 0.175 -0.411 0.158 MuHd_075 : 18.699 1.681 3.890 2.265 MuHd_095 : 17.918 5.610 4.795 3.475 MuHd_100 : 9.382 2.627 2.005 2.449 MuHd_105 : 5.913 3.337 1.344 1.279 Hmax_075 : 0.233 0.800 -2.135 1.353 Hmax_095 : 3.400 3.000 -1.073 2.390 Hmax_100 : 2.500 1.100 -2.489 1.710 Hmax_105 : 0.933 4.783 -1.658 0.849 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9638 0.0362 DFMC : 0.9276 0.0724
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 421 PCHAS_1464100 MAAVDMQMRSGDLEGTKNENDKTNGNKNDEEMQSGIKTYYEMKIEEYESIINKKLQNKKRLEAQRNELNTRVRELRDEIQ 80 YLLEAASYVGEIAKPMGKNKVLVKINPEGKYVVDIASHIDIAKCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVP 160 DSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI 240 GEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDDAL 320 LRPGRIDRKIEFPNPNVEARIEILKIHSRKMNLMRGIDMVKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEM 400 AVAKVMKQDAEKNFTLRKLWK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1464100 9 AVDMQMR|SG 0.105 . PCHAS_1464100 17 GDLEGTK|NE 0.059 . PCHAS_1464100 22 TKNENDK|TN 0.088 . PCHAS_1464100 27 DKTNGNK|ND 0.067 . PCHAS_1464100 37 EMQSGIK|TY 0.054 . PCHAS_1464100 43 KTYYEMK|IE 0.059 . PCHAS_1464100 53 YESIINK|KL 0.064 . PCHAS_1464100 54 ESIINKK|LQ 0.096 . PCHAS_1464100 58 NKKLQNK|KR 0.061 . PCHAS_1464100 59 KKLQNKK|RL 0.114 . PCHAS_1464100 60 KLQNKKR|LE 0.171 . PCHAS_1464100 65 KRLEAQR|NE 0.074 . PCHAS_1464100 71 RNELNTR|VR 0.071 . PCHAS_1464100 73 ELNTRVR|EL 0.111 . PCHAS_1464100 76 TRVRELR|DE 0.409 . PCHAS_1464100 94 YVGEIAK|PM 0.070 . PCHAS_1464100 98 IAKPMGK|NK 0.054 . PCHAS_1464100 100 KPMGKNK|VL 0.077 . PCHAS_1464100 104 KNKVLVK|IN 0.064 . PCHAS_1464100 110 KINPEGK|YV 0.096 . PCHAS_1464100 123 SHIDIAK|CT 0.065 . PCHAS_1464100 129 KCTPNTR|VA 0.068 . PCHAS_1464100 138 LYNDSYK|LH 0.058 . PCHAS_1464100 141 DSYKLHK|IL 0.062 . PCHAS_1464100 146 HKILPSK|VD 0.057 . PCHAS_1464100 155 PLVSLMK|VE 0.054 . PCHAS_1464100 158 SLMKVEK|VP 0.064 . PCHAS_1464100 175 GLDQQVK|EV 0.083 . PCHAS_1464100 178 QQVKEVK|EV 0.072 . PCHAS_1464100 186 VIELPVK|HP 0.060 . PCHAS_1464100 200 LGISQPK|GV 0.082 . PCHAS_1464100 212 GPPGTGK|TL 0.059 . PCHAS_1464100 217 GKTLLAR|AV 0.134 . PCHAS_1464100 229 TDCTFIR|VS 0.131 . PCHAS_1464100 238 GSELVQK|YI 0.105 . PCHAS_1464100 245 YIGEGSR|MV 0.115 . PCHAS_1464100 248 EGSRMVR|EL 0.260 . PCHAS_1464100 255 ELFVMAR|EH 0.090 . PCHAS_1464100 274 DSIGSQR|IE 0.114 . PCHAS_1464100 286 GDSEVQR|TM 0.152 . PCHAS_1464100 305 ESTQNIK|VI 0.055 . PCHAS_1464100 312 VIMCTNR|ID 0.071 . PCHAS_1464100 322 LDDALLR|PG 0.069 . PCHAS_1464100 325 ALLRPGR|ID 0.223 . PCHAS_1464100 328 RPGRIDR|KI 0.277 . PCHAS_1464100 329 PGRIDRK|IE 0.075 . PCHAS_1464100 340 NPNVEAR|IE 0.127 . PCHAS_1464100 345 ARIEILK|IH 0.067 . PCHAS_1464100 349 ILKIHSR|KM 0.079 . PCHAS_1464100 350 LKIHSRK|MN 0.092 . PCHAS_1464100 355 RKMNLMR|GI 0.152 . PCHAS_1464100 361 RGIDMVK|IA 0.068 . PCHAS_1464100 375 CSGAEVK|AV 0.103 . PCHAS_1464100 387 AGMFALR|ER 0.080 . PCHAS_1464100 389 MFALRER|RV 0.129 . PCHAS_1464100 390 FALRERR|VH 0.353 . PCHAS_1464100 404 FEMAVAK|VM 0.065 . PCHAS_1464100 407 AVAKVMK|QD 0.074 . PCHAS_1464100 412 MKQDAEK|NF 0.058 . PCHAS_1464100 417 EKNFTLR|KL 0.106 . PCHAS_1464100 418 KNFTLRK|LW 0.077 . PCHAS_1464100 421 TLRKLWK|-- 0.080 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1464100 ATGGCAGCAGTTGATATGCAAATGAGGTCAGGTGATTTAGAAGGAACAAAAAATGAAAAT GATAAAACCAATGGAAATAAAAATGATGAAGAAATGCAATCAGGTATTAAAACATATTAT GAAATGAAAATAGAAGAATATGAATCAATTATAAATAAAAAGTTACAAAATAAAAAACGA TTAGAAGCTCAAAGAAATGAATTAAATACAAGAGTTAGAGAATTAAGAGATGAAATTCAA TATTTATTAGAAGCTGCATCATATGTTGGTGAAATAGCTAAACCCATGGGAAAAAATAAA GTACTTGTTAAAATAAATCCAGAAGGTAAATATGTAGTAGATATAGCTAGCCATATAGAT ATAGCCAAATGTACACCAAATACAAGAGTTGCTTTATATAATGATTCATATAAGTTACAT AAAATATTACCAAGCAAAGTTGATCCACTTGTTTCATTAATGAAAGTTGAAAAAGTACCT GACTCAACATATGAAATGGTTGGAGGATTAGATCAACAAGTTAAAGAAGTTAAAGAAGTT ATTGAATTACCAGTTAAACATCCAGAAATATTTGAATCATTAGGTATATCACAACCTAAA GGAGTATTATTATATGGACCACCAGGAACAGGAAAAACTTTATTAGCACGTGCGGTAGCA CATCATACAGATTGTACATTTATAAGAGTTTCCGGTTCTGAGCTCGTTCAGAAATATATT GGAGAAGGTTCTCGTATGGTTAGAGAATTATTTGTTATGGCTAGAGAACATGCACCATCA ATTATTTTTATGGATGAAATTGATTCTATAGGAAGTCAAAGAATAGAAGGTGAACATGGA GATTCAGAAGTTCAAAGAACAATGATGGAATTGTTAAATCAACTAGATGGATTTGAATCA ACACAAAATATTAAAGTTATTATGTGCACGAACAGAATTGATATATTAGATGATGCATTA TTAAGACCAGGACGTATCGATAGGAAAATCGAATTCCCAAATCCAAATGTAGAAGCACGT ATTGAAATTCTTAAAATTCATAGTAGAAAAATGAATCTAATGAGAGGCATTGATATGGTT AAAATCGCTACAGATATGAATAATTGCTCCGGAGCAGAAGTGAAAGCTGTTTGTACTGAA GCTGGTATGTTTGCTTTAAGAGAAAGAAGAGTTCATGTTACTCAAGAGGACTTTGAAATG GCTGTCGCTAAAGTTATGAAACAAGATGCAGAAAAAAATTTTACCTTACGAAAGTTATGG AAATAA
  • Download Fasta

  • Fasta :-

    MAAVDMQMRSGDLEGTKNENDKTNGNKNDEEMQSGIKTYYEMKIEEYESIINKKLQNKKR LEAQRNELNTRVRELRDEIQYLLEAASYVGEIAKPMGKNKVLVKINPEGKYVVDIASHID IAKCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEV IELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI GEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFES TQNIKVIMCTNRIDILDDALLRPGRIDRKIEFPNPNVEARIEILKIHSRKMNLMRGIDMV KIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKQDAEKNFTLRKLW K

  • title: ATP binding site
  • coordinates: P207,P208,G209,T210,G211,K212,T213,L214,D265,N311
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1464100162 SKVPDSTYEM0.996unspPCHAS_1464100231 SFIRVSGSEL0.996unsp

PCHAS_146410      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India