PF3D7_0207700 | serine repeat antigen 4

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0207700SP0.0618820.9378760.000242CS pos: 25-26. TTA-ST. Pr: 0.6583
No Results

  • Fasta :-

    >PF3D7_0207700 MKIHIFLIATIYVLFSEKLIKWTTASTTQGGDTDTHPGTPPGEGSDVSQGAGQDASQGAG QDANPDPTLPKPPSPPADDTKDTGSQGDADSSSSKIEIPPLVKPENHKTIVSAMLKNYKG VKVTGTCGADFGLFLVPHIYVHVKSEDTEIELSSELAPPEMQTKFDKTQLKKFCVKDDTK KFDFIAYIYKDILVFKWKVYEEGLSKEQDVDEMKYLLPNLKQPITSIQVHSWTGTKESYI LESKDYVLGEGMPEKCDAIATDCFLSGFTDIGKCFQCKLLMQEKNINDSCFKYVSSNQKE LIKKQLKITAQDDEESSEYHLSESIKNLLKNIYKKNNDDNKKKELLHFENVNSALKSELL NYCNLLKEVNMNGVLKDHQLGNVQDVFNNLTKLLEEHKEENDNVLYHKMKNEALCLKNVN DWMKNKTGLLLPQLSYDLTYKNNNFTEFTQNKSYTSQNIVDKLYCNHEYCNRLKDHNNCI SKINVEDQKNCALSWAFASKYHLETIKCMKGYEPLNASVLYVTNCLKNKNKDVCTEGSNP LVFLETIEEKGFLPTESNYPYDQSKVGDICPQLQNDWDNVFENTKVLDYNNGPFSVGTKG YIAYESEAFQKDMHSFVKLVKDEIMNKGSVIAYVKAENVLGYELNGKKVQNLCGDKTPDH VVNIVGYGNYINNKGEKKSYWIVRNSWGKYWGDDGYFKVDMYGPSTCEDNFIHTVVVFNV QVPINEKFDKKEHDIYNYYLKTSPEFYHNLYYKTFNSNKEEKSMNKNSYVYGQDTTPVEN EAPRSGVQKPTELSSTESQTVSPPNESQTESLLSGGSQVTNPTLTQSTSSSSGQQETGPL STQGLSPATGDPKGKEQEASPAEGLSGVLNPTKEVTSEEKIQIIHLLKHIKNSKIRRGLV KYNHEFEVGDNSCSRSTSKNAEMHDECVNICEKYWPECRGTAVPGYCLSTHDDKNECDFC YV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0207700.fa Sequence name : PF3D7_0207700 Sequence length : 962 VALUES OF COMPUTED PARAMETERS Coef20 : 4.372 CoefTot : -0.751 ChDiff : -26 ZoneTo : 31 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.053 1.624 0.115 0.612 MesoH : -0.708 -0.035 -0.483 0.129 MuHd_075 : 25.613 19.763 7.916 4.984 MuHd_095 : 29.232 15.461 8.804 5.776 MuHd_100 : 24.155 12.068 7.772 4.805 MuHd_105 : 23.480 10.695 8.056 3.974 Hmax_075 : 20.700 19.483 3.705 7.650 Hmax_095 : 12.950 15.138 1.799 6.318 Hmax_100 : 12.500 17.900 2.190 7.570 Hmax_105 : 16.800 19.017 3.372 6.113 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9049 0.0951 DFMC : 0.9489 0.0511
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 962 PF3D7_0207700 MKIHIFLIATIYVLFSEKLIKWTTASTTQGGDTDTHPGTPPGEGSDVSQGAGQDASQGAGQDANPDPTLPKPPSPPADDT 80 KDTGSQGDADSSSSKIEIPPLVKPENHKTIVSAMLKNYKGVKVTGTCGADFGLFLVPHIYVHVKSEDTEIELSSELAPPE 160 MQTKFDKTQLKKFCVKDDTKKFDFIAYIYKDILVFKWKVYEEGLSKEQDVDEMKYLLPNLKQPITSIQVHSWTGTKESYI 240 LESKDYVLGEGMPEKCDAIATDCFLSGFTDIGKCFQCKLLMQEKNINDSCFKYVSSNQKELIKKQLKITAQDDEESSEYH 320 LSESIKNLLKNIYKKNNDDNKKKELLHFENVNSALKSELLNYCNLLKEVNMNGVLKDHQLGNVQDVFNNLTKLLEEHKEE 400 NDNVLYHKMKNEALCLKNVNDWMKNKTGLLLPQLSYDLTYKNNNFTEFTQNKSYTSQNIVDKLYCNHEYCNRLKDHNNCI 480 SKINVEDQKNCALSWAFASKYHLETIKCMKGYEPLNASVLYVTNCLKNKNKDVCTEGSNPLVFLETIEEKGFLPTESNYP 560 YDQSKVGDICPQLQNDWDNVFENTKVLDYNNGPFSVGTKGYIAYESEAFQKDMHSFVKLVKDEIMNKGSVIAYVKAENVL 640 GYELNGKKVQNLCGDKTPDHVVNIVGYGNYINNKGEKKSYWIVRNSWGKYWGDDGYFKVDMYGPSTCEDNFIHTVVVFNV 720 QVPINEKFDKKEHDIYNYYLKTSPEFYHNLYYKTFNSNKEEKSMNKNSYVYGQDTTPVENEAPRSGVQKPTELSSTESQT 800 VSPPNESQTESLLSGGSQVTNPTLTQSTSSSSGQQETGPLSTQGLSPATGDPKGKEQEASPAEGLSGVLNPTKEVTSEEK 880 IQIIHLLKHIKNSKIRRGLVKYNHEFEVGDNSCSRSTSKNAEMHDECVNICEKYWPECRGTAVPGYCLSTHDDKNECDFC 960 YV 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 .. 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0207700 2 -----MK|IH 0.061 . PF3D7_0207700 18 YVLFSEK|LI 0.056 . PF3D7_0207700 21 FSEKLIK|WT 0.075 . PF3D7_0207700 71 PDPTLPK|PP 0.062 . PF3D7_0207700 81 PPADDTK|DT 0.116 . PF3D7_0207700 95 ADSSSSK|IE 0.065 . PF3D7_0207700 103 EIPPLVK|PE 0.054 . PF3D7_0207700 108 VKPENHK|TI 0.059 . PF3D7_0207700 116 IVSAMLK|NY 0.065 . PF3D7_0207700 119 AMLKNYK|GV 0.075 . PF3D7_0207700 122 KNYKGVK|VT 0.075 . PF3D7_0207700 144 HIYVHVK|SE 0.098 . PF3D7_0207700 164 PPEMQTK|FD 0.075 . PF3D7_0207700 167 MQTKFDK|TQ 0.063 . PF3D7_0207700 171 FDKTQLK|KF 0.068 . PF3D7_0207700 172 DKTQLKK|FC 0.082 . PF3D7_0207700 176 LKKFCVK|DD 0.079 . PF3D7_0207700 180 CVKDDTK|KF 0.057 . PF3D7_0207700 181 VKDDTKK|FD 0.093 . PF3D7_0207700 190 FIAYIYK|DI 0.066 . PF3D7_0207700 196 KDILVFK|WK 0.067 . PF3D7_0207700 198 ILVFKWK|VY 0.078 . PF3D7_0207700 206 YEEGLSK|EQ 0.058 . PF3D7_0207700 214 QDVDEMK|YL 0.073 . PF3D7_0207700 221 YLLPNLK|QP 0.058 . PF3D7_0207700 236 HSWTGTK|ES 0.059 . PF3D7_0207700 244 SYILESK|DY 0.067 . PF3D7_0207700 255 GEGMPEK|CD 0.067 . PF3D7_0207700 273 GFTDIGK|CF 0.060 . PF3D7_0207700 278 GKCFQCK|LL 0.074 . PF3D7_0207700 284 KLLMQEK|NI 0.063 . PF3D7_0207700 292 INDSCFK|YV 0.088 . PF3D7_0207700 299 YVSSNQK|EL 0.070 . PF3D7_0207700 303 NQKELIK|KQ 0.059 . PF3D7_0207700 304 QKELIKK|QL 0.087 . PF3D7_0207700 307 LIKKQLK|IT 0.065 . PF3D7_0207700 326 HLSESIK|NL 0.072 . PF3D7_0207700 330 SIKNLLK|NI 0.062 . PF3D7_0207700 334 LLKNIYK|KN 0.061 . PF3D7_0207700 335 LKNIYKK|NN 0.124 . PF3D7_0207700 341 KNNDDNK|KK 0.063 . PF3D7_0207700 342 NNDDNKK|KE 0.073 . PF3D7_0207700 343 NDDNKKK|EL 0.105 . PF3D7_0207700 356 NVNSALK|SE 0.058 . PF3D7_0207700 367 NYCNLLK|EV 0.067 . PF3D7_0207700 376 NMNGVLK|DH 0.073 . PF3D7_0207700 392 VFNNLTK|LL 0.066 . PF3D7_0207700 398 KLLEEHK|EE 0.057 . PF3D7_0207700 408 DNVLYHK|MK 0.068 . PF3D7_0207700 410 VLYHKMK|NE 0.069 . PF3D7_0207700 417 NEALCLK|NV 0.074 . PF3D7_0207700 424 NVNDWMK|NK 0.065 . PF3D7_0207700 426 NDWMKNK|TG 0.055 . PF3D7_0207700 441 SYDLTYK|NN 0.062 . PF3D7_0207700 452 TEFTQNK|SY 0.086 . PF3D7_0207700 462 SQNIVDK|LY 0.073 . PF3D7_0207700 472 NHEYCNR|LK 0.075 . PF3D7_0207700 474 EYCNRLK|DH 0.066 . PF3D7_0207700 482 HNNCISK|IN 0.063 . PF3D7_0207700 489 INVEDQK|NC 0.054 . PF3D7_0207700 500 SWAFASK|YH 0.071 . PF3D7_0207700 507 YHLETIK|CM 0.060 . PF3D7_0207700 510 ETIKCMK|GY 0.074 . PF3D7_0207700 527 YVTNCLK|NK 0.056 . PF3D7_0207700 529 TNCLKNK|NK 0.072 . PF3D7_0207700 531 CLKNKNK|DV 0.125 . PF3D7_0207700 550 LETIEEK|GF 0.061 . PF3D7_0207700 565 YPYDQSK|VG 0.065 . PF3D7_0207700 585 NVFENTK|VL 0.057 . PF3D7_0207700 599 PFSVGTK|GY 0.079 . PF3D7_0207700 611 ESEAFQK|DM 0.072 . PF3D7_0207700 618 DMHSFVK|LV 0.085 . PF3D7_0207700 621 SFVKLVK|DE 0.065 . PF3D7_0207700 627 KDEIMNK|GS 0.059 . PF3D7_0207700 635 SVIAYVK|AE 0.058 . PF3D7_0207700 647 GYELNGK|KV 0.062 . PF3D7_0207700 648 YELNGKK|VQ 0.066 . PF3D7_0207700 656 QNLCGDK|TP 0.058 . PF3D7_0207700 674 GNYINNK|GE 0.065 . PF3D7_0207700 677 INNKGEK|KS 0.071 . PF3D7_0207700 678 NNKGEKK|SY 0.178 . PF3D7_0207700 684 KSYWIVR|NS 0.112 . PF3D7_0207700 689 VRNSWGK|YW 0.097 . PF3D7_0207700 698 GDDGYFK|VD 0.058 . PF3D7_0207700 727 QVPINEK|FD 0.057 . PF3D7_0207700 730 INEKFDK|KE 0.073 . PF3D7_0207700 731 NEKFDKK|EH 0.090 . PF3D7_0207700 741 IYNYYLK|TS 0.062 . PF3D7_0207700 753 YHNLYYK|TF 0.064 . PF3D7_0207700 759 KTFNSNK|EE 0.058 . PF3D7_0207700 762 NSNKEEK|SM 0.086 . PF3D7_0207700 766 EEKSMNK|NS 0.061 . PF3D7_0207700 784 VENEAPR|SG 0.131 . PF3D7_0207700 789 PRSGVQK|PT 0.088 . PF3D7_0207700 853 PATGDPK|GK 0.066 . PF3D7_0207700 855 TGDPKGK|EQ 0.076 . PF3D7_0207700 873 GVLNPTK|EV 0.077 . PF3D7_0207700 880 EVTSEEK|IQ 0.057 . PF3D7_0207700 888 QIIHLLK|HI 0.059 . PF3D7_0207700 891 HLLKHIK|NS 0.061 . PF3D7_0207700 894 KHIKNSK|IR 0.058 . PF3D7_0207700 896 IKNSKIR|RG 0.097 . PF3D7_0207700 897 KNSKIRR|GL 0.307 . PF3D7_0207700 901 IRRGLVK|YN 0.092 . PF3D7_0207700 915 GDNSCSR|ST 0.217 . PF3D7_0207700 919 CSRSTSK|NA 0.075 . PF3D7_0207700 933 CVNICEK|YW 0.066 . PF3D7_0207700 939 KYWPECR|GT 0.080 . PF3D7_0207700 954 LSTHDDK|NE 0.056 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0207700 ATGAAGATACACATTTTTTTGATCGCAACCATATATGTATTATTTAGTGAAAAGTTAATA AAATGGACAACCGCCAGTACTACTCAAGGAGGTGATACAGATACACATCCAGGTACTCCT CCAGGTGAAGGTTCAGATGTTAGTCAAGGCGCAGGTCAAGATGCTAGTCAAGGTGCAGGT CAAGATGCTAATCCAGATCCAACTCTACCTAAACCACCAAGTCCTCCTGCTGATGATACA AAAGATACTGGTTCCCAAGGAGATGCCGATTCTTCATCTTCAAAAATAGAAATCCCTCCA TTAGTAAAGCCTGAAAATCATAAAACTATAGTTTCTGCTATGTTAAAAAATTATAAAGGT GTAAAAGTTACTGGAACATGTGGTGCAGATTTTGGTTTATTTTTAGTACCTCATATTTAT GTTCATGTTAAATCAGAAGATACTGAAATTGAATTATCATCAGAATTAGCACCACCAGAA ATGCAAACAAAATTTGATAAGACTCAATTGAAAAAATTTTGTGTGAAAGATGACACAAAA AAATTTGATTTCATAGCGTATATTTATAAGGATATCCTAGTTTTTAAATGGAAAGTATAC GAAGAAGGATTATCCAAGGAACAAGATGTGGATGAAATGAAGTATTTATTACCAAACTTA AAGCAACCAATAACATCCATTCAAGTACATAGCTGGACAGGAACTAAAGAATCTTACATA CTTGAAAGTAAAGATTATGTCTTAGGAGAAGGAATGCCTGAAAAATGTGATGCTATAGCT ACCGACTGTTTCTTAAGTGGATTTACTGATATCGGAAAATGTTTCCAATGTAAATTGTTA ATGCAGGAAAAAAATATAAATGATTCTTGTTTCAAATATGTCTCTAGTAATCAAAAGGAA TTAATAAAGAAGCAATTAAAAATCACAGCACAAGATGATGAGGAATCTAGCGAATATCAT TTGAGCGAATCAATAAAGAACCTATTGAAAAATATATACAAAAAGAATAATGATGATAAT AAGAAAAAAGAACTATTACATTTTGAAAATGTGAATAGTGCTTTAAAATCTGAATTATTA AATTATTGTAATTTATTAAAAGAAGTAAATATGAATGGTGTTTTGAAAGATCACCAATTA GGTAATGTACAAGATGTATTTAATAACTTAACAAAATTATTAGAAGAACATAAAGAAGAA AACGATAATGTACTTTATCATAAAATGAAAAATGAAGCATTGTGTTTAAAAAATGTAAAT GACTGGATGAAAAATAAAACAGGATTACTATTACCACAATTATCATATGATCTAACATAT AAGAACAATAATTTTACAGAATTCACACAAAATAAAAGTTACACTTCTCAAAATATTGTA GATAAATTATATTGTAATCATGAATATTGTAATAGATTAAAAGATCATAATAATTGTATA TCCAAAATAAATGTAGAAGATCAAAAGAATTGTGCCTTATCATGGGCCTTTGCATCTAAA TACCATTTAGAAACTATTAAATGTATGAAAGGATATGAACCTCTAAATGCATCTGTATTA TATGTAACAAATTGTCTTAAAAATAAAAATAAAGATGTATGTACTGAAGGATCGAATCCT TTAGTGTTCTTAGAAACCATTGAAGAAAAGGGATTCTTGCCAACAGAATCGAATTATCCA TATGATCAATCTAAAGTTGGAGATATATGTCCACAATTACAAAATGATTGGGATAATGTA TTCGAAAATACAAAAGTATTAGATTATAACAATGGACCTTTTTCTGTCGGTACTAAAGGA TATATTGCCTATGAAAGTGAAGCATTTCAGAAAGATATGCATTCATTTGTTAAATTAGTA AAAGATGAAATAATGAACAAAGGTTCAGTTATTGCTTATGTAAAAGCTGAAAATGTTTTG GGTTATGAACTAAACGGAAAGAAAGTTCAAAACTTATGTGGTGATAAAACACCTGATCAT GTAGTTAATATTGTTGGTTATGGTAATTATATAAATAATAAAGGTGAGAAAAAATCCTAT TGGATTGTAAGAAATAGTTGGGGTAAATATTGGGGAGACGATGGTTACTTTAAAGTTGAT ATGTATGGACCATCAACATGTGAAGATAATTTCATTCATACTGTAGTAGTATTTAATGTT CAAGTACCTATAAATGAAAAATTTGATAAGAAGGAGCATGATATATATAATTACTACTTG AAAACTTCTCCAGAATTTTATCACAACCTTTACTATAAAACATTTAATTCAAACAAAGAG GAAAAATCTATGAACAAGAATTCTTATGTTTATGGTCAAGATACGACACCAGTAGAAAAT GAAGCACCGAGAAGTGGAGTACAAAAACCGACAGAATTATCATCAACTGAATCTCAAACA GTATCACCACCAAATGAATCTCAAACAGAATCGTTATTAAGTGGAGGTTCACAAGTAACA AATCCAACGTTAACACAAAGTACATCCTCATCAAGCGGACAACAAGAAACAGGGCCCTTA TCAACACAAGGACTATCACCAGCAACTGGAGATCCAAAAGGAAAAGAACAAGAAGCATCA CCGGCAGAAGGATTATCAGGAGTATTAAATCCTACGAAGGAAGTTACATCTGAAGAAAAG ATCCAAATAATACATCTATTGAAACATATAAAGAATAGTAAAATTAGAAGAGGTTTAGTT AAATATAATCATGAATTTGAAGTAGGAGATAATTCTTGTTCTAGATCTACTTCAAAAAAT GCAGAAATGCATGATGAATGTGTAAACATTTGTGAAAAATATTGGCCTGAATGTAGAGGA ACGGCTGTTCCTGGATATTGTTTAAGTACACATGATGACAAAAATGAATGTGATTTCTGT TATGTATAA
  • Download Fasta

  • Fasta :-

    MKIHIFLIATIYVLFSEKLIKWTTASTTQGGDTDTHPGTPPGEGSDVSQGAGQDASQGAG QDANPDPTLPKPPSPPADDTKDTGSQGDADSSSSKIEIPPLVKPENHKTIVSAMLKNYKG VKVTGTCGADFGLFLVPHIYVHVKSEDTEIELSSELAPPEMQTKFDKTQLKKFCVKDDTK KFDFIAYIYKDILVFKWKVYEEGLSKEQDVDEMKYLLPNLKQPITSIQVHSWTGTKESYI LESKDYVLGEGMPEKCDAIATDCFLSGFTDIGKCFQCKLLMQEKNINDSCFKYVSSNQKE LIKKQLKITAQDDEESSEYHLSESIKNLLKNIYKKNNDDNKKKELLHFENVNSALKSELL NYCNLLKEVNMNGVLKDHQLGNVQDVFNNLTKLLEEHKEENDNVLYHKMKNEALCLKNVN DWMKNKTGLLLPQLSYDLTYKNNNFTEFTQNKSYTSQNIVDKLYCNHEYCNRLKDHNNCI SKINVEDQKNCALSWAFASKYHLETIKCMKGYEPLNASVLYVTNCLKNKNKDVCTEGSNP LVFLETIEEKGFLPTESNYPYDQSKVGDICPQLQNDWDNVFENTKVLDYNNGPFSVGTKG YIAYESEAFQKDMHSFVKLVKDEIMNKGSVIAYVKAENVLGYELNGKKVQNLCGDKTPDH VVNIVGYGNYINNKGEKKSYWIVRNSWGKYWGDDGYFKVDMYGPSTCEDNFIHTVVVFNV QVPINEKFDKKEHDIYNYYLKTSPEFYHNLYYKTFNSNKEEKSMNKNSYVYGQDTTPVEN EAPRSGVQKPTELSSTESQTVSPPNESQTESLLSGGSQVTNPTLTQSTSSSSGQQETGPL STQGLSPATGDPKGKEQEASPAEGLSGVLNPTKEVTSEEKIQIIHLLKHIKNSKIRRGLV KYNHEFEVGDNSCSRSTSKNAEMHDECVNICEKYWPECRGTAVPGYCLSTHDDKNECDFC YV

  • title: active site
  • coordinates: Q488,S494,H660,N685
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0207700877 SKEVTSEEKI0.993unspPF3D7_0207700877 SKEVTSEEKI0.993unspPF3D7_0207700877 SKEVTSEEKI0.993unspPF3D7_020770085 SKDTGSQGDA0.997unspPF3D7_020770094 SDSSSSKIEI0.995unsp

PF02_0073      PFB0345c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India