PF3D7_0408900 | tRNA N6-adenosine threonylcarbamoyltransferase

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0020011      

  • Curated_GO_Components:  apicoplast      

  • Curated_GO_Function_IDs:  GO:0003677      GO:0005515      

  • Curated_GO_Functions:  DNA binding      protein binding      

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0408900SP0.2907600.7086150.000624CS pos: 25-26. CYT-FK. Pr: 0.7480
No Results

  • Fasta :-

    >PF3D7_0408900 MKNVSTHIAIYLFCYIFLIHYLCYTFKIDNIPIKNNKFSDILQRAVKNINKHLNKKNVNY DICKYRKIPKILLQTNNCKKKKKLNYIVGIENTCDDTCICVIDTDLNIIKNVIISHYKVV HSYEGVYPFFISSLNSLFLKHYVNKILDNIDPKHVICYGFSSCPGIAKNMEAAKNYIGEK KKQNENIKISAVNHIFAHILSPLFFNFYNDKHTYTNSAEYKNENIKADEEDDKIYLNISE SIKNDKEHKNKIKNVLEVLNKNIITQEKLINLIEDDFFTYGSYVLNRIKKKKKTEENKLD DNKINNTEEKTVNEEKKDIHNETLNIIQTEYMKDGYLCILVSGGSTDVYKVQKDTKNAIN VCKISTTMDITIGDVIDKVTRLLELPVGLGGGPFLEKEAQKYLTNLKSASSENLQNDPFQ PFPNPFSTNNIIDFSFSGIYNHMSKIIKKLKSEKSFEKEKGRYAYYCQKNIFHHLLKQVN KIMYFSELHFNIKNVFIVGGVGCNNFLYQSLKDMAAKRDNEENQIKEYNRLRKRLRKKMK KINDEKLSVLKISKDSLKSDHDYNSSLSWKIYLKNLLKKRKSKDILSTFKLFNFDDFIKL KQQGSFLLDDTVFKKGTSPWSIYKTPLNLSRDNAAMIAFNTFLNLHNKTNLYDDTLDIDI KTTVKTKLENNFLLLSDIIIFDVMLQYYDNNKG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0408900.fa Sequence name : PF3D7_0408900 Sequence length : 693 VALUES OF COMPUTED PARAMETERS Coef20 : 4.188 CoefTot : -0.847 ChDiff : 28 ZoneTo : 28 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.659 1.965 0.397 0.773 MesoH : -0.524 0.440 -0.330 0.261 MuHd_075 : 18.508 20.394 8.612 4.241 MuHd_095 : 16.903 14.452 5.562 3.986 MuHd_100 : 10.299 11.168 4.434 2.945 MuHd_105 : 15.240 15.437 5.000 3.867 Hmax_075 : 18.900 24.000 5.786 7.110 Hmax_095 : 19.250 19.900 4.798 6.920 Hmax_100 : 16.800 22.300 5.035 6.620 Hmax_105 : 21.467 24.383 6.325 7.688 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5826 0.4174 DFMC : 0.8254 0.1746
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 693 PF3D7_0408900 MKNVSTHIAIYLFCYIFLIHYLCYTFKIDNIPIKNNKFSDILQRAVKNINKHLNKKNVNYDICKYRKIPKILLQTNNCKK 80 KKKLNYIVGIENTCDDTCICVIDTDLNIIKNVIISHYKVVHSYEGVYPFFISSLNSLFLKHYVNKILDNIDPKHVICYGF 160 SSCPGIAKNMEAAKNYIGEKKKQNENIKISAVNHIFAHILSPLFFNFYNDKHTYTNSAEYKNENIKADEEDDKIYLNISE 240 SIKNDKEHKNKIKNVLEVLNKNIITQEKLINLIEDDFFTYGSYVLNRIKKKKKTEENKLDDNKINNTEEKTVNEEKKDIH 320 NETLNIIQTEYMKDGYLCILVSGGSTDVYKVQKDTKNAINVCKISTTMDITIGDVIDKVTRLLELPVGLGGGPFLEKEAQ 400 KYLTNLKSASSENLQNDPFQPFPNPFSTNNIIDFSFSGIYNHMSKIIKKLKSEKSFEKEKGRYAYYCQKNIFHHLLKQVN 480 KIMYFSELHFNIKNVFIVGGVGCNNFLYQSLKDMAAKRDNEENQIKEYNRLRKRLRKKMKKINDEKLSVLKISKDSLKSD 560 HDYNSSLSWKIYLKNLLKKRKSKDILSTFKLFNFDDFIKLKQQGSFLLDDTVFKKGTSPWSIYKTPLNLSRDNAAMIAFN 640 TFLNLHNKTNLYDDTLDIDIKTTVKTKLENNFLLLSDIIIFDVMLQYYDNNKG 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ..................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0408900 2 -----MK|NV 0.095 . PF3D7_0408900 27 YLCYTFK|ID 0.060 . PF3D7_0408900 34 IDNIPIK|NN 0.064 . PF3D7_0408900 37 IPIKNNK|FS 0.079 . PF3D7_0408900 44 FSDILQR|AV 0.134 . PF3D7_0408900 47 ILQRAVK|NI 0.149 . PF3D7_0408900 51 AVKNINK|HL 0.065 . PF3D7_0408900 55 INKHLNK|KN 0.058 . PF3D7_0408900 56 NKHLNKK|NV 0.116 . PF3D7_0408900 64 VNYDICK|YR 0.057 . PF3D7_0408900 66 YDICKYR|KI 0.128 . PF3D7_0408900 67 DICKYRK|IP 0.075 . PF3D7_0408900 70 KYRKIPK|IL 0.066 . PF3D7_0408900 79 LQTNNCK|KK 0.057 . PF3D7_0408900 80 QTNNCKK|KK 0.076 . PF3D7_0408900 81 TNNCKKK|KK 0.137 . PF3D7_0408900 82 NNCKKKK|KL 0.134 . PF3D7_0408900 83 NCKKKKK|LN 0.115 . PF3D7_0408900 110 TDLNIIK|NV 0.071 . PF3D7_0408900 118 VIISHYK|VV 0.077 . PF3D7_0408900 140 LNSLFLK|HY 0.069 . PF3D7_0408900 145 LKHYVNK|IL 0.082 . PF3D7_0408900 153 LDNIDPK|HV 0.094 . PF3D7_0408900 168 SCPGIAK|NM 0.069 . PF3D7_0408900 174 KNMEAAK|NY 0.069 . PF3D7_0408900 180 KNYIGEK|KK 0.058 . PF3D7_0408900 181 NYIGEKK|KQ 0.091 . PF3D7_0408900 182 YIGEKKK|QN 0.116 . PF3D7_0408900 188 KQNENIK|IS 0.061 . PF3D7_0408900 211 FNFYNDK|HT 0.065 . PF3D7_0408900 221 TNSAEYK|NE 0.077 . PF3D7_0408900 226 YKNENIK|AD 0.065 . PF3D7_0408900 233 ADEEDDK|IY 0.060 . PF3D7_0408900 243 NISESIK|ND 0.062 . PF3D7_0408900 246 ESIKNDK|EH 0.062 . PF3D7_0408900 249 KNDKEHK|NK 0.062 . PF3D7_0408900 251 DKEHKNK|IK 0.067 . PF3D7_0408900 253 EHKNKIK|NV 0.088 . PF3D7_0408900 261 VLEVLNK|NI 0.070 . PF3D7_0408900 268 NIITQEK|LI 0.071 . PF3D7_0408900 287 GSYVLNR|IK 0.108 . PF3D7_0408900 289 YVLNRIK|KK 0.057 . PF3D7_0408900 290 VLNRIKK|KK 0.369 . PF3D7_0408900 291 LNRIKKK|KK 0.114 . PF3D7_0408900 292 NRIKKKK|KT 0.163 . PF3D7_0408900 293 RIKKKKK|TE 0.132 . PF3D7_0408900 298 KKTEENK|LD 0.064 . PF3D7_0408900 303 NKLDDNK|IN 0.069 . PF3D7_0408900 310 INNTEEK|TV 0.090 . PF3D7_0408900 316 KTVNEEK|KD 0.063 . PF3D7_0408900 317 TVNEEKK|DI 0.213 . PF3D7_0408900 333 IQTEYMK|DG 0.060 . PF3D7_0408900 350 GSTDVYK|VQ 0.061 . PF3D7_0408900 353 DVYKVQK|DT 0.078 . PF3D7_0408900 356 KVQKDTK|NA 0.072 . PF3D7_0408900 363 NAINVCK|IS 0.071 . PF3D7_0408900 378 IGDVIDK|VT 0.057 . PF3D7_0408900 381 VIDKVTR|LL 0.074 . PF3D7_0408900 397 GGPFLEK|EA 0.070 . PF3D7_0408900 401 LEKEAQK|YL 0.068 . PF3D7_0408900 407 KYLTNLK|SA 0.078 . PF3D7_0408900 445 IYNHMSK|II 0.065 . PF3D7_0408900 448 HMSKIIK|KL 0.067 . PF3D7_0408900 449 MSKIIKK|LK 0.107 . PF3D7_0408900 451 KIIKKLK|SE 0.080 . PF3D7_0408900 454 KKLKSEK|SF 0.095 . PF3D7_0408900 458 SEKSFEK|EK 0.066 . PF3D7_0408900 460 KSFEKEK|GR 0.069 . PF3D7_0408900 462 FEKEKGR|YA 0.128 . PF3D7_0408900 469 YAYYCQK|NI 0.066 . PF3D7_0408900 477 IFHHLLK|QV 0.091 . PF3D7_0408900 481 LLKQVNK|IM 0.070 . PF3D7_0408900 493 ELHFNIK|NV 0.091 . PF3D7_0408900 512 FLYQSLK|DM 0.082 . PF3D7_0408900 517 LKDMAAK|RD 0.063 . PF3D7_0408900 518 KDMAAKR|DN 0.319 . PF3D7_0408900 526 NEENQIK|EY 0.062 . PF3D7_0408900 530 QIKEYNR|LR 0.074 . PF3D7_0408900 532 KEYNRLR|KR 0.070 . PF3D7_0408900 533 EYNRLRK|RL 0.239 . PF3D7_0408900 534 YNRLRKR|LR 0.123 . PF3D7_0408900 536 RLRKRLR|KK 0.128 . PF3D7_0408900 537 LRKRLRK|KM 0.272 . PF3D7_0408900 538 RKRLRKK|MK 0.110 . PF3D7_0408900 540 RLRKKMK|KI 0.096 . PF3D7_0408900 541 LRKKMKK|IN 0.151 . PF3D7_0408900 546 KKINDEK|LS 0.054 . PF3D7_0408900 551 EKLSVLK|IS 0.062 . PF3D7_0408900 554 SVLKISK|DS 0.064 . PF3D7_0408900 558 ISKDSLK|SD 0.097 . PF3D7_0408900 570 NSSLSWK|IY 0.071 . PF3D7_0408900 574 SWKIYLK|NL 0.062 . PF3D7_0408900 578 YLKNLLK|KR 0.052 . PF3D7_0408900 579 LKNLLKK|RK 0.120 . PF3D7_0408900 580 KNLLKKR|KS 0.231 . PF3D7_0408900 581 NLLKKRK|SK 0.119 . PF3D7_0408900 583 LKKRKSK|DI 0.210 . PF3D7_0408900 590 DILSTFK|LF 0.053 . PF3D7_0408900 599 NFDDFIK|LK 0.058 . PF3D7_0408900 601 DDFIKLK|QQ 0.069 . PF3D7_0408900 614 LDDTVFK|KG 0.054 . PF3D7_0408900 615 DDTVFKK|GT 0.106 . PF3D7_0408900 624 SPWSIYK|TP 0.054 . PF3D7_0408900 631 TPLNLSR|DN 0.112 . PF3D7_0408900 648 FLNLHNK|TN 0.058 . PF3D7_0408900 661 TLDIDIK|TT 0.056 . PF3D7_0408900 665 DIKTTVK|TK 0.052 . PF3D7_0408900 667 KTTVKTK|LE 0.059 . PF3D7_0408900 692 QYYDNNK|G- 0.063 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0408900 ATGAAAAATGTAAGTACTCATATTGCTATATATTTATTCTGTTATATATTTTTAATTCAT TATTTATGTTATACATTTAAAATTGATAATATCCCAATAAAGAATAACAAATTTAGTGAT ATTCTTCAGAGAGCAGTAAAAAATATAAATAAACATCTTAACAAGAAAAATGTAAACTAC GATATATGTAAATATAGAAAAATTCCCAAGATTCTGTTACAAACAAATAATTGTAAGAAA AAGAAAAAATTGAATTATATAGTTGGAATAGAAAATACATGTGATGATACTTGTATTTGT GTTATTGATACCGATTTAAATATAATTAAAAATGTAATCATATCCCACTATAAAGTTGTG CATAGTTATGAAGGTGTATATCCTTTTTTTATAAGCTCTTTAAATAGTTTGTTCTTAAAA CATTATGTCAACAAAATATTAGATAATATAGATCCTAAACATGTTATCTGTTATGGCTTT AGTTCCTGTCCAGGGATAGCCAAAAATATGGAAGCAGCAAAAAATTATATAGGAGAAAAA AAAAAACAAAATGAAAATATCAAAATAAGTGCTGTAAATCATATATTTGCGCACATTCTT TCACCACTATTTTTTAATTTTTATAATGATAAGCATACGTACACAAATAGTGCTGAATAT AAAAATGAAAATATAAAAGCAGATGAAGAGGATGACAAAATTTATTTAAACATATCAGAA AGCATAAAAAATGATAAGGAGCATAAAAACAAAATAAAAAATGTTCTGGAAGTTTTAAAT AAAAATATTATCACACAAGAAAAATTAATAAATTTGATAGAGGATGATTTTTTTACATAT GGATCATATGTACTAAACAGAATAAAAAAAAAAAAAAAAACAGAAGAGAATAAATTGGAT GATAATAAAATAAATAATACTGAAGAAAAAACGGTGAATGAGGAAAAAAAGGATATACAT AATGAAACGTTAAATATCATACAAACGGAATATATGAAAGACGGCTATCTTTGTATTTTA GTTTCAGGAGGTAGTACAGATGTGTACAAAGTTCAGAAAGATACAAAAAATGCTATTAAT GTGTGTAAAATATCGACAACAATGGATATAACTATTGGTGATGTGATTGATAAGGTTACT AGACTCCTCGAACTTCCTGTTGGTTTAGGTGGAGGACCATTTCTTGAAAAAGAAGCACAA AAATATCTTACAAATTTAAAAAGTGCATCTAGTGAAAATTTGCAAAATGACCCTTTTCAA CCTTTTCCTAATCCCTTTTCAACTAATAATATAATTGATTTTTCCTTTTCTGGAATATAC AATCACATGAGTAAAATAATAAAAAAATTGAAAAGTGAAAAATCATTTGAAAAGGAAAAA GGAAGATATGCATATTATTGCCAGAAAAATATATTCCATCATTTATTAAAACAAGTGAAT AAAATAATGTATTTTTCAGAACTCCATTTTAATATAAAAAATGTATTTATAGTTGGGGGA GTTGGCTGTAATAATTTTTTATATCAAAGTTTAAAAGATATGGCTGCAAAAAGGGACAAT GAAGAAAATCAAATAAAAGAATATAATCGCTTAAGAAAACGATTAAGGAAAAAAATGAAA AAAATTAATGATGAAAAATTGTCTGTATTAAAAATTTCAAAAGATAGTCTCAAAAGTGAT CACGATTATAATTCTTCCTTGTCATGGAAGATATATTTAAAAAATCTTTTAAAGAAAAGG AAAAGTAAAGACATTCTATCAACATTCAAATTATTTAATTTTGATGACTTTATTAAATTG AAACAACAAGGAAGTTTTTTATTGGATGATACTGTTTTTAAAAAAGGTACAAGTCCTTGG AGTATTTACAAGACCCCTTTAAACCTTAGTAGGGACAATGCTGCAATGATAGCCTTCAAC ACTTTTTTAAATTTACACAATAAAACTAATCTTTATGACGACACGTTAGATATCGATATA AAAACAACAGTAAAAACAAAATTGGAGAATAATTTCCTACTTTTATCGGATATAATAATT TTTGATGTAATGCTACAGTATTATGACAATAATAAGGGATGA
  • Download Fasta

  • Fasta :-

    MKNVSTHIAIYLFCYIFLIHYLCYTFKIDNIPIKNNKFSDILQRAVKNINKHLNKKNVNY DICKYRKIPKILLQTNNCKKKKKLNYIVGIENTCDDTCICVIDTDLNIIKNVIISHYKVV HSYEGVYPFFISSLNSLFLKHYVNKILDNIDPKHVICYGFSSCPGIAKNMEAAKNYIGEK KKQNENIKISAVNHIFAHILSPLFFNFYNDKHTYTNSAEYKNENIKADEEDDKIYLNISE SIKNDKEHKNKIKNVLEVLNKNIITQEKLINLIEDDFFTYGSYVLNRIKKKKKTEENKLD DNKINNTEEKTVNEEKKDIHNETLNIIQTEYMKDGYLCILVSGGSTDVYKVQKDTKNAIN VCKISTTMDITIGDVIDKVTRLLELPVGLGGGPFLEKEAQKYLTNLKSASSENLQNDPFQ PFPNPFSTNNIIDFSFSGIYNHMSKIIKKLKSEKSFEKEKGRYAYYCQKNIFHHLLKQVN KIMYFSELHFNIKNVFIVGGVGCNNFLYQSLKDMAAKRDNEENQIKEYNRLRKRLRKKMK KINDEKLSVLKISKDSLKSDHDYNSSLSWKIYLKNLLKKRKSKDILSTFKLFNFDDFIKL KQQGSFLLDDTVFKKGTSPWSIYKTPLNLSRDNAAMIAFNTFLNLHNKTNLYDDTLDIDI KTTVKTKLENNFLLLSDIIIFDVMLQYYDNNKG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0408900559 SDSLKSDHDY0.99unspPF3D7_0408900559 SDSLKSDHDY0.99unspPF3D7_0408900559 SDSLKSDHDY0.99unspPF3D7_0408900452 SKKLKSEKSF0.997unspPF3D7_0408900556 SISKDSLKSD0.994unsp

MAL4P2.25      PF3D7_0408900.1      PF3D7_0408900.2      PFD0440w      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India