PF3D7_0413900 | ubiquitin carboxyl-terminal hydrolase 13, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0413900OTHER0.9993630.0005040.000134
No Results

  • Fasta :-

    >PF3D7_0413900 MADIKSIISLISTIVKDEPTKEEVIYLGECSITGHKDFFEDGIFIDLLSFESFSLKFLKC NYNRLSKLSSEGKNHRFYLNIKKKKNLLENIEKKVITNLNINAEGGFNENKVYEYEWEYS VYDIETGLYIKLEDLDESVQKICKGIINHKNEVKKDNINKWVNDIKESKYAKDLVQLEGI KIKNENIHCAVCKSTKNIWLNLSDGYIGCGRKIFNYGGGCLNNEEGAALKHFYESGKKYP LVVKIGTITKDGEADVFSYADDENDSVIDPYIGVHLKNLGINIMNLEKTEITTLEKEIEE NQNINFSSILDNNIQTICQQGKIGFVNLGNTCYMNSALQVLLSIKDISYRYLNNISDFLL SLDYKKKTHDDLFLQYSKLCYMIFEEDYITKKKQYVKKFKTQCKDRNVEINYDSDIDDEN SVSINPSMFRNCINQKSNSFCNNNQQDIYEYLSYLINELIDNENNIFDRILKVNNNKRKL NEINNETNEKLNPNELLNSTSPSNNDSNVTKERSLFNYFTFEIEQRIESESNNQSISSFQ NNILSLDIPLDSSLLNGDEEKLKNVNISLLDCLNNYIKKDNIDEYYCQKEKKKIHAQKYM KFKTFPPYLFIHLKRFYADENWSAKKINIEVKTDEQLNLEFMRVQPNSTDVLNGQKEQET SPGDSMLQKESKLLEDHKDVLDSLLDFGFEKDKAIEAIKKVKIKNVNNCISYIYGEDTVE LDDDVNCEKEEVNSNNLDSIINLGVKKEVAMAALILNKNNLQKAIDYIFSNLDDLTDSKC NLIINSNKCNDGLANYELVASIVHIGNNANSGHYICYIKDESKWYICNDNKIGLCEGNLG KDSAYIHLYKRLS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0413900.fa Sequence name : PF3D7_0413900 Sequence length : 853 VALUES OF COMPUTED PARAMETERS Coef20 : 4.039 CoefTot : 0.135 ChDiff : -26 ZoneTo : 16 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.759 1.494 0.003 0.518 MesoH : -0.899 0.161 -0.471 0.153 MuHd_075 : 17.005 10.031 3.349 1.890 MuHd_095 : 14.951 20.054 6.253 6.269 MuHd_100 : 17.987 22.736 6.354 7.240 MuHd_105 : 17.558 23.529 5.991 7.571 Hmax_075 : 4.317 14.350 0.314 3.873 Hmax_095 : 7.100 17.900 2.183 5.620 Hmax_100 : 10.200 23.200 3.134 7.360 Hmax_105 : 11.637 21.963 2.861 7.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9839 0.0161 DFMC : 0.9884 0.0116
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 853 PF3D7_0413900 MADIKSIISLISTIVKDEPTKEEVIYLGECSITGHKDFFEDGIFIDLLSFESFSLKFLKCNYNRLSKLSSEGKNHRFYLN 80 IKKKKNLLENIEKKVITNLNINAEGGFNENKVYEYEWEYSVYDIETGLYIKLEDLDESVQKICKGIINHKNEVKKDNINK 160 WVNDIKESKYAKDLVQLEGIKIKNENIHCAVCKSTKNIWLNLSDGYIGCGRKIFNYGGGCLNNEEGAALKHFYESGKKYP 240 LVVKIGTITKDGEADVFSYADDENDSVIDPYIGVHLKNLGINIMNLEKTEITTLEKEIEENQNINFSSILDNNIQTICQQ 320 GKIGFVNLGNTCYMNSALQVLLSIKDISYRYLNNISDFLLSLDYKKKTHDDLFLQYSKLCYMIFEEDYITKKKQYVKKFK 400 TQCKDRNVEINYDSDIDDENSVSINPSMFRNCINQKSNSFCNNNQQDIYEYLSYLINELIDNENNIFDRILKVNNNKRKL 480 NEINNETNEKLNPNELLNSTSPSNNDSNVTKERSLFNYFTFEIEQRIESESNNQSISSFQNNILSLDIPLDSSLLNGDEE 560 KLKNVNISLLDCLNNYIKKDNIDEYYCQKEKKKIHAQKYMKFKTFPPYLFIHLKRFYADENWSAKKINIEVKTDEQLNLE 640 FMRVQPNSTDVLNGQKEQETSPGDSMLQKESKLLEDHKDVLDSLLDFGFEKDKAIEAIKKVKIKNVNNCISYIYGEDTVE 720 LDDDVNCEKEEVNSNNLDSIINLGVKKEVAMAALILNKNNLQKAIDYIFSNLDDLTDSKCNLIINSNKCNDGLANYELVA 800 SIVHIGNNANSGHYICYIKDESKWYICNDNKIGLCEGNLGKDSAYIHLYKRLS 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ..................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0413900 5 --MADIK|SI 0.083 . PF3D7_0413900 16 LISTIVK|DE 0.078 . PF3D7_0413900 21 VKDEPTK|EE 0.057 . PF3D7_0413900 36 CSITGHK|DF 0.061 . PF3D7_0413900 56 FESFSLK|FL 0.070 . PF3D7_0413900 59 FSLKFLK|CN 0.062 . PF3D7_0413900 64 LKCNYNR|LS 0.073 . PF3D7_0413900 67 NYNRLSK|LS 0.134 . PF3D7_0413900 73 KLSSEGK|NH 0.067 . PF3D7_0413900 76 SEGKNHR|FY 0.093 . PF3D7_0413900 82 RFYLNIK|KK 0.058 . PF3D7_0413900 83 FYLNIKK|KK 0.075 . PF3D7_0413900 84 YLNIKKK|KN 0.092 . PF3D7_0413900 85 LNIKKKK|NL 0.110 . PF3D7_0413900 93 LLENIEK|KV 0.073 . PF3D7_0413900 94 LENIEKK|VI 0.099 . PF3D7_0413900 111 GGFNENK|VY 0.061 . PF3D7_0413900 131 ETGLYIK|LE 0.055 . PF3D7_0413900 141 LDESVQK|IC 0.073 . PF3D7_0413900 144 SVQKICK|GI 0.071 . PF3D7_0413900 150 KGIINHK|NE 0.056 . PF3D7_0413900 154 NHKNEVK|KD 0.059 . PF3D7_0413900 155 HKNEVKK|DN 0.155 . PF3D7_0413900 160 KKDNINK|WV 0.100 . PF3D7_0413900 166 KWVNDIK|ES 0.062 . PF3D7_0413900 169 NDIKESK|YA 0.072 . PF3D7_0413900 172 KESKYAK|DL 0.108 . PF3D7_0413900 181 VQLEGIK|IK 0.055 . PF3D7_0413900 183 LEGIKIK|NE 0.061 . PF3D7_0413900 193 IHCAVCK|ST 0.093 . PF3D7_0413900 196 AVCKSTK|NI 0.067 . PF3D7_0413900 211 GYIGCGR|KI 0.093 . PF3D7_0413900 212 YIGCGRK|IF 0.077 . PF3D7_0413900 230 EEGAALK|HF 0.062 . PF3D7_0413900 237 HFYESGK|KY 0.063 . PF3D7_0413900 238 FYESGKK|YP 0.070 . PF3D7_0413900 244 KYPLVVK|IG 0.057 . PF3D7_0413900 250 KIGTITK|DG 0.070 . PF3D7_0413900 277 YIGVHLK|NL 0.077 . PF3D7_0413900 288 NIMNLEK|TE 0.057 . PF3D7_0413900 296 EITTLEK|EI 0.060 . PF3D7_0413900 322 TICQQGK|IG 0.072 . PF3D7_0413900 345 QVLLSIK|DI 0.064 . PF3D7_0413900 350 IKDISYR|YL 0.099 . PF3D7_0413900 365 LLSLDYK|KK 0.063 . PF3D7_0413900 366 LSLDYKK|KT 0.096 . PF3D7_0413900 367 SLDYKKK|TH 0.120 . PF3D7_0413900 378 LFLQYSK|LC 0.055 . PF3D7_0413900 391 EEDYITK|KK 0.059 . PF3D7_0413900 392 EDYITKK|KQ 0.078 . PF3D7_0413900 393 DYITKKK|QY 0.122 . PF3D7_0413900 397 KKKQYVK|KF 0.063 . PF3D7_0413900 398 KKQYVKK|FK 0.171 . PF3D7_0413900 400 QYVKKFK|TQ 0.069 . PF3D7_0413900 404 KFKTQCK|DR 0.072 . PF3D7_0413900 406 KTQCKDR|NV 0.175 . PF3D7_0413900 430 INPSMFR|NC 0.081 . PF3D7_0413900 436 RNCINQK|SN 0.084 . PF3D7_0413900 469 ENNIFDR|IL 0.092 . PF3D7_0413900 472 IFDRILK|VN 0.085 . PF3D7_0413900 477 LKVNNNK|RK 0.059 . PF3D7_0413900 478 KVNNNKR|KL 0.193 . PF3D7_0413900 479 VNNNKRK|LN 0.115 . PF3D7_0413900 490 NNETNEK|LN 0.060 . PF3D7_0413900 511 NDSNVTK|ER 0.068 . PF3D7_0413900 513 SNVTKER|SL 0.189 . PF3D7_0413900 526 TFEIEQR|IE 0.101 . PF3D7_0413900 561 LNGDEEK|LK 0.060 . PF3D7_0413900 563 GDEEKLK|NV 0.079 . PF3D7_0413900 578 CLNNYIK|KD 0.062 . PF3D7_0413900 579 LNNYIKK|DN 0.145 . PF3D7_0413900 589 DEYYCQK|EK 0.061 . PF3D7_0413900 591 YYCQKEK|KK 0.064 . PF3D7_0413900 592 YCQKEKK|KI 0.181 . PF3D7_0413900 593 CQKEKKK|IH 0.116 . PF3D7_0413900 598 KKIHAQK|YM 0.075 . PF3D7_0413900 601 HAQKYMK|FK 0.062 . PF3D7_0413900 603 QKYMKFK|TF 0.084 . PF3D7_0413900 614 YLFIHLK|RF 0.070 . PF3D7_0413900 615 LFIHLKR|FY 0.263 . PF3D7_0413900 625 DENWSAK|KI 0.080 . PF3D7_0413900 626 ENWSAKK|IN 0.098 . PF3D7_0413900 632 KINIEVK|TD 0.072 . PF3D7_0413900 643 LNLEFMR|VQ 0.078 . PF3D7_0413900 656 DVLNGQK|EQ 0.057 . PF3D7_0413900 669 GDSMLQK|ES 0.074 . PF3D7_0413900 672 MLQKESK|LL 0.078 . PF3D7_0413900 678 KLLEDHK|DV 0.091 . PF3D7_0413900 691 LDFGFEK|DK 0.064 . PF3D7_0413900 693 FGFEKDK|AI 0.074 . PF3D7_0413900 699 KAIEAIK|KV 0.067 . PF3D7_0413900 700 AIEAIKK|VK 0.083 . PF3D7_0413900 702 EAIKKVK|IK 0.065 . PF3D7_0413900 704 IKKVKIK|NV 0.098 . PF3D7_0413900 729 DDVNCEK|EE 0.054 . PF3D7_0413900 746 IINLGVK|KE 0.054 . PF3D7_0413900 747 INLGVKK|EV 0.110 . PF3D7_0413900 758 AALILNK|NN 0.055 . PF3D7_0413900 763 NKNNLQK|AI 0.088 . PF3D7_0413900 779 DDLTDSK|CN 0.055 . PF3D7_0413900 788 LIINSNK|CN 0.067 . PF3D7_0413900 819 HYICYIK|DE 0.064 . PF3D7_0413900 823 YIKDESK|WY 0.059 . PF3D7_0413900 831 YICNDNK|IG 0.055 . PF3D7_0413900 841 CEGNLGK|DS 0.062 . PF3D7_0413900 850 AYIHLYK|RL 0.067 . PF3D7_0413900 851 YIHLYKR|LS 0.157 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0413900 ATGGCTGATATTAAAAGTATAATATCTTTAATTTCTACAATTGTAAAAGATGAGCCTACC AAAGAAGAAGTAATATATTTAGGAGAATGTAGTATAACAGGGCATAAAGATTTTTTTGAA GATGGTATATTCATCGATTTGTTGTCCTTCGAAAGTTTCAGTTTGAAATTCTTAAAATGC AATTATAACCGATTAAGTAAGTTATCAAGTGAAGGAAAAAATCACCGATTTTACCTGAAT ATAAAAAAGAAGAAAAATTTGCTAGAGAATATAGAAAAAAAAGTTATAACGAATTTGAAT ATTAATGCGGAAGGTGGTTTTAATGAAAACAAAGTTTATGAATATGAATGGGAATATTCT GTATATGATATAGAAACAGGTTTGTATATAAAATTAGAAGATTTGGATGAATCTGTTCAG AAAATATGTAAAGGTATAATTAACCATAAAAATGAAGTGAAGAAAGATAATATAAACAAA TGGGTAAATGATATAAAAGAAAGTAAGTATGCAAAAGATTTAGTTCAGCTTGAAGGAATA AAAATAAAAAATGAAAATATACATTGTGCAGTTTGTAAATCTACGAAAAATATATGGTTA AATTTATCTGATGGATATATTGGTTGTGGACGAAAAATTTTTAATTATGGAGGAGGATGT TTAAATAATGAAGAAGGAGCAGCTTTAAAACATTTTTACGAAAGTGGGAAGAAATATCCT TTAGTAGTTAAAATAGGAACTATTACAAAAGATGGAGAAGCAGATGTGTTTTCTTATGCA GATGATGAAAATGATAGTGTAATCGATCCATATATAGGTGTGCATTTAAAAAATTTAGGT ATAAATATTATGAATTTAGAAAAAACAGAAATAACAACTTTAGAAAAAGAAATCGAAGAA AATCAAAATATTAATTTTTCATCAATTCTTGATAATAATATACAAACAATATGCCAACAA GGTAAAATCGGTTTTGTCAATTTAGGAAACACATGTTATATGAACAGTGCATTACAAGTT TTGTTATCTATTAAAGATATTAGTTATAGATATTTAAATAATATTTCTGATTTCTTATTA AGTTTAGATTATAAAAAAAAAACGCATGATGATTTATTTTTACAATATTCAAAGTTATGC TATATGATATTTGAAGAAGATTATATTACTAAAAAAAAACAATATGTCAAAAAATTCAAA ACACAATGTAAGGACAGAAATGTAGAAATTAATTACGATAGTGATATTGATGATGAAAAT TCGGTTAGTATTAATCCATCCATGTTTAGAAATTGTATTAACCAAAAGAGTAATTCATTC TGTAATAATAATCAACAAGATATTTATGAATATTTATCATACCTAATTAATGAGTTGATA GATAATGAAAATAACATATTCGATCGAATATTAAAAGTTAACAATAATAAAAGAAAGTTG AATGAAATTAATAATGAAACAAATGAAAAACTAAACCCAAATGAATTGCTCAATTCAACT TCACCATCAAATAATGATTCTAATGTAACAAAAGAAAGATCACTTTTTAATTATTTCACA TTTGAAATTGAACAAAGAATAGAAAGCGAATCAAATAACCAAAGTATTAGTTCATTTCAA AATAATATATTATCATTAGATATACCTTTGGATAGTTCATTATTAAATGGAGATGAAGAA AAATTAAAAAATGTTAATATATCCTTATTAGATTGTTTAAATAATTATATTAAAAAGGAT AACATAGATGAATATTATTGTCAAAAAGAAAAAAAAAAAATACATGCACAAAAATATATG AAATTTAAAACATTCCCACCTTATCTTTTTATCCATCTTAAGCGTTTTTATGCAGATGAA AACTGGTCAGCAAAAAAAATTAATATTGAAGTTAAAACAGATGAACAATTAAATTTGGAA TTTATGAGGGTTCAACCAAATTCCACTGATGTTCTAAATGGACAAAAGGAACAAGAAACG AGTCCAGGTGACTCAATGTTACAAAAAGAAAGTAAACTTTTAGAAGATCATAAAGATGTT TTAGATTCTTTGTTAGACTTTGGTTTTGAAAAGGATAAGGCAATAGAGGCAATTAAAAAG GTAAAAATAAAAAATGTAAATAATTGTATATCTTATATTTATGGAGAAGATACAGTAGAG TTGGATGATGACGTGAATTGTGAAAAAGAAGAAGTAAATTCTAATAATTTGGATTCTATA ATTAATTTGGGAGTAAAAAAAGAAGTGGCTATGGCAGCACTTATACTGAATAAAAATAAT TTACAAAAAGCAATTGATTATATATTTTCGAATTTGGATGATTTAACGGATAGTAAGTGT AATTTGATTATAAATAGTAACAAGTGTAACGATGGATTGGCTAATTATGAATTAGTAGCA TCTATTGTACATATAGGAAACAATGCCAATTCGGGTCATTATATATGTTATATAAAGGAT GAATCCAAATGGTATATTTGCAACGATAATAAAATTGGCCTATGTGAAGGAAATTTAGGT AAAGACAGTGCATACATTCATTTGTACAAAAGACTTTCATAA
  • Download Fasta

  • Fasta :-

    MADIKSIISLISTIVKDEPTKEEVIYLGECSITGHKDFFEDGIFIDLLSFESFSLKFLKC NYNRLSKLSSEGKNHRFYLNIKKKKNLLENIEKKVITNLNINAEGGFNENKVYEYEWEYS VYDIETGLYIKLEDLDESVQKICKGIINHKNEVKKDNINKWVNDIKESKYAKDLVQLEGI KIKNENIHCAVCKSTKNIWLNLSDGYIGCGRKIFNYGGGCLNNEEGAALKHFYESGKKYP LVVKIGTITKDGEADVFSYADDENDSVIDPYIGVHLKNLGINIMNLEKTEITTLEKEIEE NQNINFSSILDNNIQTICQQGKIGFVNLGNTCYMNSALQVLLSIKDISYRYLNNISDFLL SLDYKKKTHDDLFLQYSKLCYMIFEEDYITKKKQYVKKFKTQCKDRNVEINYDSDIDDEN SVSINPSMFRNCINQKSNSFCNNNQQDIYEYLSYLINELIDNENNIFDRILKVNNNKRKL NEINNETNEKLNPNELLNSTSPSNNDSNVTKERSLFNYFTFEIEQRIESESNNQSISSFQ NNILSLDIPLDSSLLNGDEEKLKNVNISLLDCLNNYIKKDNIDEYYCQKEKKKIHAQKYM KFKTFPPYLFIHLKRFYADENWSAKKINIEVKTDEQLNLEFMRVQPNSTDVLNGQKEQET SPGDSMLQKESKLLEDHKDVLDSLLDFGFEKDKAIEAIKKVKIKNVNNCISYIYGEDTVE LDDDVNCEKEEVNSNNLDSIINLGVKKEVAMAALILNKNNLQKAIDYIFSNLDDLTDSKC NLIINSNKCNDGLANYELVASIVHIGNNANSGHYICYIKDESKWYICNDNKIGLCEGNLG KDSAYIHLYKRLS

  • title: Active Site
  • coordinates: N327,C332,H813,D829
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0413900388 YFEEDYITKK0.99unspPF3D7_0413900388 YFEEDYITKK0.99unspPF3D7_0413900388 YFEEDYITKK0.99unspPF3D7_0413900414 SINYDSDIDD0.992unspPF3D7_0413900661 SEQETSPGDS0.997unspPF3D7_0413900266 SDENDSVIDP0.996unspPF3D7_0413900343 SQVLLSIKDI0.993unsp

MAL4P1.131      PFD0655c      PFD0680c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India