_IDPredictionOTHERSPmTPCS_Position
PF3D7_0507500SP0.3858180.6137770.000406CS pos: 25-26. CLG-KE. Pr: 0.7104
No Results
  • Fasta :-

    >PF3D7_0507500 MMLNKKVVALCTLTLHLFCIFLCLGKEVRSEENGKIQDDAKKIVSELRFLEKVEDVIEKS NIGGNEVDADENSFNPDTEVPIEEIEEIKMRELKDVKEEKNKNDNHNNNNNNISSSSSSS SNTFGEEKEEVSKKKKKLRLIVSENHATTPSFFQESLLEPDVLSFLESKGNLSNLKNINS MIIELKEDTTDDELISYIKILEEKGALIESDKLVSADNIDISGIKDAIRRGEENIDVNDY KSMLEVENDAEDYDKMFGMFNESHAATSKRKRHSTNERGYDTFSSPSYKTYSKSDYLYDD DNNNNNYYYSHSSNGHNSSSRNSSSSRSRPGKYHFNDEFRNLQWGLDLSRLDETQELINE HQVMSTRICVIDSGIDYNHPDLKDNIELNLKELHGRKGFDDDNNGIVDDIYGANFVNNSG NPMDDNYHGTHVSGIISAIGNNNIGVVGVDVNSKLIICKALDEHKLGRLGDMFKCLDYCI SRNAHMINGSFSFDEYSGIFNSSVEYLQRKGILFFVSASNCSHPKSSTPDIRKCDLSINA KYPPILSTVYDNVISVANLKKNDNNNHYSLSINSFYSNKYCQLAAPGTNIYSTAPHNSYR KLNGTSMAAPHVAAIASLIFSINPDLSYKKVIQILKDSIVYLPSLKNMVAWAGYADINKA VNLAIKSKKTYINSNISNKWKKKSRYLH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0507500.fa Sequence name : PF3D7_0507500 Sequence length : 688 VALUES OF COMPUTED PARAMETERS Coef20 : 4.628 CoefTot : 0.033 ChDiff : -17 ZoneTo : 26 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.171 2.482 0.571 0.735 MesoH : -0.305 0.413 -0.356 0.246 MuHd_075 : 21.374 14.801 7.065 5.433 MuHd_095 : 17.845 15.628 7.809 4.399 MuHd_100 : 21.222 14.640 7.907 4.921 MuHd_105 : 20.681 14.179 6.821 4.536 Hmax_075 : 19.162 21.900 6.612 6.650 Hmax_095 : 17.412 19.862 5.728 7.088 Hmax_100 : 18.800 23.800 6.727 7.620 Hmax_105 : 19.000 22.200 4.803 6.950 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9411 0.0589 DFMC : 0.9295 0.0705
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 688 PF3D7_0507500 MMLNKKVVALCTLTLHLFCIFLCLGKEVRSEENGKIQDDAKKIVSELRFLEKVEDVIEKSNIGGNEVDADENSFNPDTEV 80 PIEEIEEIKMRELKDVKEEKNKNDNHNNNNNNISSSSSSSSNTFGEEKEEVSKKKKKLRLIVSENHATTPSFFQESLLEP 160 DVLSFLESKGNLSNLKNINSMIIELKEDTTDDELISYIKILEEKGALIESDKLVSADNIDISGIKDAIRRGEENIDVNDY 240 KSMLEVENDAEDYDKMFGMFNESHAATSKRKRHSTNERGYDTFSSPSYKTYSKSDYLYDDDNNNNNYYYSHSSNGHNSSS 320 RNSSSSRSRPGKYHFNDEFRNLQWGLDLSRLDETQELINEHQVMSTRICVIDSGIDYNHPDLKDNIELNLKELHGRKGFD 400 DDNNGIVDDIYGANFVNNSGNPMDDNYHGTHVSGIISAIGNNNIGVVGVDVNSKLIICKALDEHKLGRLGDMFKCLDYCI 480 SRNAHMINGSFSFDEYSGIFNSSVEYLQRKGILFFVSASNCSHPKSSTPDIRKCDLSINAKYPPILSTVYDNVISVANLK 560 KNDNNNHYSLSINSFYSNKYCQLAAPGTNIYSTAPHNSYRKLNGTSMAAPHVAAIASLIFSINPDLSYKKVIQILKDSIV 640 YLPSLKNMVAWAGYADINKAVNLAIKSKKTYINSNISNKWKKKSRYLH 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0507500 5 --MMLNK|KV 0.066 . PF3D7_0507500 6 -MMLNKK|VV 0.092 . PF3D7_0507500 26 IFLCLGK|EV 0.069 . PF3D7_0507500 29 CLGKEVR|SE 0.148 . PF3D7_0507500 35 RSEENGK|IQ 0.074 . PF3D7_0507500 41 KIQDDAK|KI 0.071 . PF3D7_0507500 42 IQDDAKK|IV 0.139 . PF3D7_0507500 48 KIVSELR|FL 0.156 . PF3D7_0507500 52 ELRFLEK|VE 0.069 . PF3D7_0507500 59 VEDVIEK|SN 0.080 . PF3D7_0507500 89 EEIEEIK|MR 0.057 . PF3D7_0507500 91 IEEIKMR|EL 0.112 . PF3D7_0507500 94 IKMRELK|DV 0.277 . PF3D7_0507500 97 RELKDVK|EE 0.053 . PF3D7_0507500 100 KDVKEEK|NK 0.067 . PF3D7_0507500 102 VKEEKNK|ND 0.062 . PF3D7_0507500 128 NTFGEEK|EE 0.053 . PF3D7_0507500 133 EKEEVSK|KK 0.057 . PF3D7_0507500 134 KEEVSKK|KK 0.088 . PF3D7_0507500 135 EEVSKKK|KK 0.103 . PF3D7_0507500 136 EVSKKKK|KL 0.118 . PF3D7_0507500 137 VSKKKKK|LR 0.091 . PF3D7_0507500 139 KKKKKLR|LI 0.120 . PF3D7_0507500 169 LSFLESK|GN 0.063 . PF3D7_0507500 176 GNLSNLK|NI 0.060 . PF3D7_0507500 186 SMIIELK|ED 0.059 . PF3D7_0507500 199 ELISYIK|IL 0.062 . PF3D7_0507500 204 IKILEEK|GA 0.065 . PF3D7_0507500 212 ALIESDK|LV 0.075 . PF3D7_0507500 225 IDISGIK|DA 0.068 . PF3D7_0507500 229 GIKDAIR|RG 0.082 . PF3D7_0507500 230 IKDAIRR|GE 0.130 . PF3D7_0507500 241 IDVNDYK|SM 0.094 . PF3D7_0507500 255 DAEDYDK|MF 0.071 . PF3D7_0507500 269 SHAATSK|RK 0.065 . PF3D7_0507500 270 HAATSKR|KR 0.184 . PF3D7_0507500 271 AATSKRK|RH 0.099 . PF3D7_0507500 272 ATSKRKR|HS 0.314 . PF3D7_0507500 278 RHSTNER|GY 0.112 . PF3D7_0507500 289 FSSPSYK|TY 0.083 . PF3D7_0507500 293 SYKTYSK|SD 0.066 . PF3D7_0507500 321 GHNSSSR|NS 0.111 . PF3D7_0507500 327 RNSSSSR|SR 0.159 . PF3D7_0507500 329 SSSSRSR|PG 0.110 . PF3D7_0507500 332 SRSRPGK|YH 0.269 . PF3D7_0507500 340 HFNDEFR|NL 0.118 . PF3D7_0507500 350 WGLDLSR|LD 0.077 . PF3D7_0507500 367 HQVMSTR|IC 0.073 . PF3D7_0507500 383 YNHPDLK|DN 0.067 . PF3D7_0507500 391 NIELNLK|EL 0.053 . PF3D7_0507500 396 LKELHGR|KG 0.090 . PF3D7_0507500 397 KELHGRK|GF 0.085 . PF3D7_0507500 454 GVDVNSK|LI 0.059 . PF3D7_0507500 459 SKLIICK|AL 0.068 . PF3D7_0507500 465 KALDEHK|LG 0.056 . PF3D7_0507500 468 DEHKLGR|LG 0.079 . PF3D7_0507500 474 RLGDMFK|CL 0.069 . PF3D7_0507500 482 LDYCISR|NA 0.102 . PF3D7_0507500 509 SVEYLQR|KG 0.073 . PF3D7_0507500 510 VEYLQRK|GI 0.080 . PF3D7_0507500 525 SNCSHPK|SS 0.091 . PF3D7_0507500 532 SSTPDIR|KC 0.101 . PF3D7_0507500 533 STPDIRK|CD 0.065 . PF3D7_0507500 541 DLSINAK|YP 0.063 . PF3D7_0507500 560 ISVANLK|KN 0.061 . PF3D7_0507500 561 SVANLKK|ND 0.091 . PF3D7_0507500 579 NSFYSNK|YC 0.067 . PF3D7_0507500 600 APHNSYR|KL 0.116 . PF3D7_0507500 601 PHNSYRK|LN 0.094 . PF3D7_0507500 629 NPDLSYK|KV 0.090 . PF3D7_0507500 630 PDLSYKK|VI 0.078 . PF3D7_0507500 636 KVIQILK|DS 0.071 . PF3D7_0507500 646 VYLPSLK|NM 0.051 . PF3D7_0507500 659 GYADINK|AV 0.077 . PF3D7_0507500 666 AVNLAIK|SK 0.082 . PF3D7_0507500 668 NLAIKSK|KT 0.069 . PF3D7_0507500 669 LAIKSKK|TY 0.105 . PF3D7_0507500 679 NSNISNK|WK 0.073 . PF3D7_0507500 681 NISNKWK|KK 0.095 . PF3D7_0507500 682 ISNKWKK|KS 0.112 . PF3D7_0507500 683 SNKWKKK|SR 0.158 . PF3D7_0507500 685 KWKKKSR|YL 0.150 . ____________________________^_________________
  • Fasta :-

    >PF3D7_0507500 ATGATGCTCAATAAAAAAGTTGTTGCTTTGTGCACACTTACCTTACATCTTTTTTGTATA TTTCTATGTCTAGGAAAGGAAGTAAGGTCTGAAGAAAATGGGAAAATACAAGATGATGCT AAAAAGATTGTTAGCGAATTACGATTCCTAGAAAAAGTAGAAGATGTTATTGAAAAGAGT AACATAGGAGGGAATGAGGTAGATGCCGATGAAAATTCATTTAATCCGGATACTGAGGTT CCCATAGAAGAGATAGAAGAAATAAAAATGAGGGAACTGAAAGATGTAAAGGAAGAAAAA AATAAAAATGACAACCATAATAATAATAATAATAATATTAGTAGTAGTAGTAGTAGTAGT AGTAATACTTTTGGTGAAGAAAAAGAAGAAGTATCTAAGAAAAAAAAAAAGTTAAGACTT ATAGTTAGCGAGAATCATGCAACTACCCCCTCGTTTTTCCAAGAATCCCTTTTAGAACCT GATGTTTTATCCTTTTTAGAAAGTAAAGGGAATTTGTCCAACTTGAAAAATATCAATTCT ATGATTATAGAACTAAAGGAAGATACAACGGATGATGAATTAATATCTTATATTAAAATT CTTGAGGAGAAGGGAGCTTTGATTGAATCAGATAAATTAGTGAGTGCAGATAATATTGAT ATAAGTGGTATAAAAGATGCTATAAGAAGAGGTGAAGAAAATATTGATGTTAATGATTAT AAAAGTATGTTAGAAGTCGAAAATGATGCTGAAGATTATGATAAAATGTTTGGTATGTTT AATGAATCACATGCTGCAACATCTAAAAGGAAACGCCATTCAACAAATGAGCGTGGATAT GATACATTTTCATCACCTTCATATAAGACATATTCAAAAAGTGATTATTTATATGATGAT GATAATAATAATAATAATTATTATTATAGTCATAGTAGTAATGGTCATAATAGTAGTAGT CGTAATAGTAGTAGTAGTCGTAGTAGACCAGGTAAATATCATTTCAATGATGAATTTCGT AATTTGCAATGGGGTTTAGATTTATCCAGATTAGATGAAACACAAGAATTAATTAACGAA CATCAAGTGATGAGTACTCGTATATGTGTTATAGATAGTGGTATTGATTATAATCATCCC GATTTAAAAGATAATATTGAATTAAATTTAAAAGAATTACATGGAAGGAAAGGTTTTGAT GATGATAATAATGGTATAGTTGATGATATATATGGTGCTAATTTTGTAAATAATTCAGGA AACCCGATGGATGATAATTATCATGGTACTCATGTATCAGGAATTATATCTGCCATAGGA AATAATAATATAGGTGTTGTAGGTGTTGATGTAAATTCAAAATTAATTATTTGTAAAGCA TTAGATGAACATAAATTAGGAAGATTAGGAGATATGTTCAAATGTTTAGATTATTGTATA AGTAGAAATGCACATATGATAAATGGAAGCTTTTCATTTGATGAATATAGTGGTATTTTT AATTCTTCTGTAGAATATTTACAAAGAAAAGGTATCCTCTTTTTTGTATCTGCAAGTAAT TGTAGTCATCCTAAATCGTCAACACCAGATATTAGAAAATGTGATTTATCCATAAATGCA AAATATCCCCCTATCTTATCTACTGTTTATGATAATGTTATATCTGTTGCTAATTTAAAA AAAAATGATAATAATAATCATTATTCATTATCCATTAATTCTTTTTATAGCAATAAATAT TGTCAACTAGCTGCACCAGGAACTAATATATATTCTACTGCTCCACATAATTCATATCGA AAATTAAATGGTACATCTATGGCTGCTCCACATGTAGCTGCAATAGCATCACTCATATTT TCTATTAATCCTGACTTATCATATAAAAAAGTTATACAAATATTAAAAGATTCTATTGTA TATCTCCCTTCCTTAAAAAATATGGTTGCATGGGCAGGATATGCAGATATAAATAAGGCA GTCAATTTAGCCATAAAATCAAAAAAAACATATATCAATTCTAATATATCTAACAAGTGG AAAAAAAAAAGTAGATATTTGCATTAA
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  • Fasta :-

    MMLNKKVVALCTLTLHLFCIFLCLGKEVRSEENGKIQDDAKKIVSELRFLEKVEDVIEKS NIGGNEVDADENSFNPDTEVPIEEIEEIKMRELKDVKEEKNKNDNHNNNNNNISSSSSSS SNTFGEEKEEVSKKKKKLRLIVSENHATTPSFFQESLLEPDVLSFLESKGNLSNLKNINS MIIELKEDTTDDELISYIKILEEKGALIESDKLVSADNIDISGIKDAIRRGEENIDVNDY KSMLEVENDAEDYDKMFGMFNESHAATSKRKRHSTNERGYDTFSSPSYKTYSKSDYLYDD DNNNNNYYYSHSSNGHNSSSRNSSSSRSRPGKYHFNDEFRNLQWGLDLSRLDETQELINE HQVMSTRICVIDSGIDYNHPDLKDNIELNLKELHGRKGFDDDNNGIVDDIYGANFVNNSG NPMDDNYHGTHVSGIISAIGNNNIGVVGVDVNSKLIICKALDEHKLGRLGDMFKCLDYCI SRNAHMINGSFSFDEYSGIFNSSVEYLQRKGILFFVSASNCSHPKSSTPDIRKCDLSINA KYPPILSTVYDNVISVANLKKNDNNNHYSLSINSFYSNKYCQLAAPGTNIYSTAPHNSYR KLNGTSMAAPHVAAIASLIFSINPDLSYKKVIQILKDSIVYLPSLKNMVAWAGYADINKA VNLAIKSKKTYINSNISNKWKKKSRYLH

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0507500132 SKEEVSKKKK0.99unspPF3D7_0507500132 SKEEVSKKKK0.99unspPF3D7_0507500132 SKEEVSKKKK0.99unspPF3D7_0507500274 SRKRHSTNER0.997unspPF3D7_0507500292 SYKTYSKSDY0.993unspPF3D7_0507500323 SSSRNSSSSR0.993unspPF3D7_0507500324 SSRNSSSSRS0.997unspPF3D7_0507500326 SNSSSSRSRP0.995unspPF3D7_0507500527 SHPKSSTPDI0.995unspPF3D7_050750030 SKEVRSEENG0.996unspPF3D7_0507500119 SSSSSSSSNT0.995unsp

MAL5P1.76      PFE0370c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India