PF3D7_0515100 | rhomboid protease ROM9

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0515100OTHER0.9725480.0001110.027340
No Results

  • Fasta :-

    >PF3D7_0515100 MVWGKRNYFISPDSFRSFRYYFPKNFERRTKEERNVFYLSGRKNSNDSLFNKIRINEKRE KNFCNYNLHQRTFCRYSQENIFNKQKKKKKEKINMINRNGDGDGQTNVFSSLSWLNVKYD ILEMYKKKNIYNMVIRKKYLNNIYIYCNDLKNKYVKIYKIYYKKYLYMEIKEKTFSNITK IFTNMCMYKNYVINNIIRNKLKWTNIEKCLKNIRFNYNKRNIFLFEKISSLYKNKSNIHK NININENINKYTIYYKNIFLYHYKLSPVTYTLILLHIFVYFLWNIAEPSRNSYNYYYINN FKHNNYNNKNKYTSPLLSTDTMYKYFSCSLQNLKEKKLYTLVTNLISHNTIQSFLLNTIS LYYIGTALEKIIQSRNFFITYLISGVLSSYIQILYHKNNYNNIYVFGASGSISSILSTYT FMYPSQNIYLYGVLALPLALFSSLYFLNEIYCVLSNRQDNTGHIAHLTGMGLGLIYYYFF IKRGRLLR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0515100.fa Sequence name : PF3D7_0515100 Sequence length : 488 VALUES OF COMPUTED PARAMETERS Coef20 : 4.273 CoefTot : -1.218 ChDiff : 49 ZoneTo : 26 KR : 5 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.800 1.865 0.299 0.754 MesoH : 0.677 0.707 -0.081 0.421 MuHd_075 : 19.778 11.803 4.317 5.514 MuHd_095 : 34.666 19.532 7.973 7.095 MuHd_100 : 35.608 13.958 7.629 6.521 MuHd_105 : 39.494 13.668 8.503 7.393 Hmax_075 : 6.650 4.083 -1.318 3.220 Hmax_095 : 12.513 9.275 0.396 4.427 Hmax_100 : 6.800 3.700 -0.787 2.920 Hmax_105 : 10.383 5.833 0.455 1.767 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1427 0.8573 DFMC : 0.5009 0.4991
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 488 PF3D7_0515100 MVWGKRNYFISPDSFRSFRYYFPKNFERRTKEERNVFYLSGRKNSNDSLFNKIRINEKREKNFCNYNLHQRTFCRYSQEN 80 IFNKQKKKKKEKINMINRNGDGDGQTNVFSSLSWLNVKYDILEMYKKKNIYNMVIRKKYLNNIYIYCNDLKNKYVKIYKI 160 YYKKYLYMEIKEKTFSNITKIFTNMCMYKNYVINNIIRNKLKWTNIEKCLKNIRFNYNKRNIFLFEKISSLYKNKSNIHK 240 NININENINKYTIYYKNIFLYHYKLSPVTYTLILLHIFVYFLWNIAEPSRNSYNYYYINNFKHNNYNNKNKYTSPLLSTD 320 TMYKYFSCSLQNLKEKKLYTLVTNLISHNTIQSFLLNTISLYYIGTALEKIIQSRNFFITYLISGVLSSYIQILYHKNNY 400 NNIYVFGASGSISSILSTYTFMYPSQNIYLYGVLALPLALFSSLYFLNEIYCVLSNRQDNTGHIAHLTGMGLGLIYYYFF 480 IKRGRLLR 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ........ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0515100 5 --MVWGK|RN 0.062 . PF3D7_0515100 6 -MVWGKR|NY 0.162 . PF3D7_0515100 16 ISPDSFR|SF 0.137 . PF3D7_0515100 19 DSFRSFR|YY 0.345 . PF3D7_0515100 24 FRYYFPK|NF 0.077 . PF3D7_0515100 28 FPKNFER|RT 0.097 . PF3D7_0515100 29 PKNFERR|TK 0.149 . PF3D7_0515100 31 NFERRTK|EE 0.117 . PF3D7_0515100 34 RRTKEER|NV 0.105 . PF3D7_0515100 42 VFYLSGR|KN 0.072 . PF3D7_0515100 43 FYLSGRK|NS 0.064 . PF3D7_0515100 52 NDSLFNK|IR 0.067 . PF3D7_0515100 54 SLFNKIR|IN 0.148 . PF3D7_0515100 58 KIRINEK|RE 0.054 . PF3D7_0515100 59 IRINEKR|EK 0.181 . PF3D7_0515100 61 INEKREK|NF 0.064 . PF3D7_0515100 71 NYNLHQR|TF 0.076 . PF3D7_0515100 75 HQRTFCR|YS 0.116 . PF3D7_0515100 84 QENIFNK|QK 0.068 . PF3D7_0515100 86 NIFNKQK|KK 0.061 . PF3D7_0515100 87 IFNKQKK|KK 0.169 . PF3D7_0515100 88 FNKQKKK|KK 0.140 . PF3D7_0515100 89 NKQKKKK|KE 0.116 . PF3D7_0515100 90 KQKKKKK|EK 0.114 . PF3D7_0515100 92 KKKKKEK|IN 0.076 . PF3D7_0515100 98 KINMINR|NG 0.095 . PF3D7_0515100 118 LSWLNVK|YD 0.059 . PF3D7_0515100 126 DILEMYK|KK 0.056 . PF3D7_0515100 127 ILEMYKK|KN 0.082 . PF3D7_0515100 128 LEMYKKK|NI 0.109 . PF3D7_0515100 136 IYNMVIR|KK 0.080 . PF3D7_0515100 137 YNMVIRK|KY 0.074 . PF3D7_0515100 138 NMVIRKK|YL 0.105 . PF3D7_0515100 151 IYCNDLK|NK 0.058 . PF3D7_0515100 153 CNDLKNK|YV 0.079 . PF3D7_0515100 156 LKNKYVK|IY 0.069 . PF3D7_0515100 159 KYVKIYK|IY 0.062 . PF3D7_0515100 163 IYKIYYK|KY 0.059 . PF3D7_0515100 164 YKIYYKK|YL 0.117 . PF3D7_0515100 171 YLYMEIK|EK 0.062 . PF3D7_0515100 173 YMEIKEK|TF 0.071 . PF3D7_0515100 180 TFSNITK|IF 0.076 . PF3D7_0515100 189 TNMCMYK|NY 0.065 . PF3D7_0515100 198 VINNIIR|NK 0.084 . PF3D7_0515100 200 NNIIRNK|LK 0.061 . PF3D7_0515100 202 IIRNKLK|WT 0.073 . PF3D7_0515100 208 KWTNIEK|CL 0.060 . PF3D7_0515100 211 NIEKCLK|NI 0.056 . PF3D7_0515100 214 KCLKNIR|FN 0.087 . PF3D7_0515100 219 IRFNYNK|RN 0.060 . PF3D7_0515100 220 RFNYNKR|NI 0.189 . PF3D7_0515100 227 NIFLFEK|IS 0.058 . PF3D7_0515100 233 KISSLYK|NK 0.070 . PF3D7_0515100 235 SSLYKNK|SN 0.087 . PF3D7_0515100 240 NKSNIHK|NI 0.087 . PF3D7_0515100 250 INENINK|YT 0.072 . PF3D7_0515100 256 KYTIYYK|NI 0.058 . PF3D7_0515100 264 IFLYHYK|LS 0.058 . PF3D7_0515100 290 NIAEPSR|NS 0.073 . PF3D7_0515100 302 YYINNFK|HN 0.061 . PF3D7_0515100 309 HNNYNNK|NK 0.070 . PF3D7_0515100 311 NYNNKNK|YT 0.109 . PF3D7_0515100 324 STDTMYK|YF 0.069 . PF3D7_0515100 334 CSLQNLK|EK 0.051 . PF3D7_0515100 336 LQNLKEK|KL 0.073 . PF3D7_0515100 337 QNLKEKK|LY 0.090 . PF3D7_0515100 370 IGTALEK|II 0.057 . PF3D7_0515100 375 EKIIQSR|NF 0.088 . PF3D7_0515100 397 IQILYHK|NN 0.058 . PF3D7_0515100 457 YCVLSNR|QD 0.088 . PF3D7_0515100 482 YYYFFIK|RG 0.055 . PF3D7_0515100 483 YYFFIKR|GR 0.101 . PF3D7_0515100 485 FFIKRGR|LL 0.084 . PF3D7_0515100 488 KRGRLLR|-- 0.320 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0515100 ATGGTGTGGGGGAAAAGGAATTATTTTATTTCTCCTGATTCGTTCAGGAGCTTTCGTTAT TATTTTCCTAAGAATTTTGAAAGAAGAACGAAAGAAGAGAGGAATGTATTTTACTTAAGC GGAAGGAAGAATTCAAATGATTCCTTATTTAATAAAATAAGAATAAATGAAAAAAGGGAA AAGAATTTTTGTAATTATAATTTACACCAAAGGACTTTTTGTAGATATTCACAAGAAAAT ATATTTAATAAACAAAAAAAAAAGAAAAAAGAAAAAATCAATATGATAAATAGAAATGGA GATGGAGATGGACAAACAAATGTTTTCTCTTCATTATCTTGGTTAAACGTTAAATATGAT ATATTAGAAATGTATAAAAAAAAGAATATTTATAATATGGTGATAAGAAAAAAATATTTG AATAATATATATATATATTGTAATGATTTAAAAAATAAATATGTAAAAATTTATAAGATA TATTATAAAAAATATTTATATATGGAAATAAAAGAAAAAACATTTTCAAACATTACAAAG ATATTTACAAATATGTGTATGTATAAAAATTATGTAATAAATAATATTATAAGAAATAAA TTAAAATGGACAAATATTGAAAAGTGTTTAAAGAATATTCGATTTAATTATAATAAAAGG AATATTTTTTTATTTGAAAAAATATCTTCTCTATATAAAAACAAATCAAATATACATAAA AATATAAATATAAATGAAAACATAAATAAATATACAATATATTATAAAAATATATTTTTA TATCATTATAAATTATCACCAGTAACATATACTTTAATTTTATTACATATATTTGTATAT TTCTTATGGAATATTGCAGAACCTTCAAGAAACTCTTATAATTATTATTATATAAATAAC TTCAAACATAATAATTATAATAATAAAAACAAATATACATCTCCCTTATTAAGTACAGAT ACAATGTATAAGTATTTCTCTTGTAGTTTACAAAATTTAAAAGAAAAAAAATTATATACC TTAGTAACAAATTTAATTAGCCATAATACTATACAATCATTTTTATTAAATACCATATCT TTATATTATATAGGAACAGCTTTAGAAAAAATTATTCAATCCAGAAATTTTTTTATAACA TATTTAATCAGTGGTGTTCTTTCATCATATATACAAATATTATATCATAAAAATAATTAT AATAATATTTATGTATTCGGAGCTAGCGGAAGCATAAGTTCCATATTATCAACATACACT TTTATGTACCCTTCTCAAAACATATACCTCTACGGGGTATTAGCCCTTCCCTTGGCATTA TTTTCAAGTTTGTATTTCCTCAACGAAATATACTGTGTCCTTTCTAACAGACAAGATAAC ACTGGTCATATTGCTCACTTGACCGGCATGGGACTCGGTTTGATTTACTATTATTTCTTT ATTAAAAGGGGGAGATTACTACGATAA
  • Download Fasta

  • Fasta :-

    MVWGKRNYFISPDSFRSFRYYFPKNFERRTKEERNVFYLSGRKNSNDSLFNKIRINEKRE KNFCNYNLHQRTFCRYSQENIFNKQKKKKKEKINMINRNGDGDGQTNVFSSLSWLNVKYD ILEMYKKKNIYNMVIRKKYLNNIYIYCNDLKNKYVKIYKIYYKKYLYMEIKEKTFSNITK IFTNMCMYKNYVINNIIRNKLKWTNIEKCLKNIRFNYNKRNIFLFEKISSLYKNKSNIHK NININENINKYTIYYKNIFLYHYKLSPVTYTLILLHIFVYFLWNIAEPSRNSYNYYYINN FKHNNYNNKNKYTSPLLSTDTMYKYFSCSLQNLKEKKLYTLVTNLISHNTIQSFLLNTIS LYYIGTALEKIIQSRNFFITYLISGVLSSYIQILYHKNNYNNIYVFGASGSISSILSTYT FMYPSQNIYLYGVLALPLALFSSLYFLNEIYCVLSNRQDNTGHIAHLTGMGLGLIYYYFF IKRGRLLR

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PF3D7_051510077 SFCRYSQENI0.994unsp

MAL5P1.151      PFE0755c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India