PF3D7_0523100 | mitochondrial-processing peptidase subunit alpha, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0523100OTHER0.8986020.0002300.101168
No Results

  • Fasta :-

    >PF3D7_0523100 MKKNIQCLNIFYKTKWRNIHNSSIVRSKENLNLQKIYTGEKQNFNKVSFKKEKIEDVIKE VKFDYYYFNEGKKNKYKDIPLNISIINESDFPPFKAVDEKLHFSVLENDLKIISTNRNNS VCSIGLYVKCGSRYEEINDKVNEQGMSVMLENMAFHSTAHLSHLRTIKSLEKIGATVSCN AFREHMVYSCECLKEYLPIVTNLIIGNVLFPRFLSWEMKNNVNRLNLMREKLFENNELYI TELLHNTAWYNNTLGNKLYVYESSIENYTSENLRNFMLKHFSPKNMTLIGVNVEHDELTK WTSRAFQDYVPIPYTNQKEVTPKYTGGFISVEDKNVKKTNIAIAYETQGGWKSSDMITLT VLQTLMGGGGSFSTGGPGKGMYSRLFLNVLNSYNFIESCMAFSTQHSDTGLFGLYFTGEP SNTSDIIKAMALEFQKMNRVTDEELNRAKKSLKSFMWMSLEYKSILMEDLARQMMILNRI LTGKQLSDAIDSITKEDIQRVVHNFLKTKPTVVVYGNINYSPHYDEICNILGHK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0523100.fa Sequence name : PF3D7_0523100 Sequence length : 534 VALUES OF COMPUTED PARAMETERS Coef20 : 3.938 CoefTot : -0.924 ChDiff : 8 ZoneTo : 28 KR : 7 DE : 0 CleavSite : 27 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.688 1.406 0.160 0.561 MesoH : 0.272 0.337 -0.213 0.270 MuHd_075 : 30.547 23.828 7.745 8.419 MuHd_095 : 31.963 21.141 10.350 7.061 MuHd_100 : 27.857 17.575 8.433 7.062 MuHd_105 : 23.063 14.764 7.247 5.910 Hmax_075 : 0.467 9.917 0.844 3.722 Hmax_095 : 4.025 5.950 0.181 2.958 Hmax_100 : -1.300 9.600 -0.974 3.080 Hmax_105 : 3.500 6.900 -1.404 3.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2038 0.7962 DFMC : 0.2061 0.7939 This protein is probably imported in mitochondria. f(Ser) = 0.1071 f(Arg) = 0.0714 CMi = 0.63025 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 534 PF3D7_0523100 MKKNIQCLNIFYKTKWRNIHNSSIVRSKENLNLQKIYTGEKQNFNKVSFKKEKIEDVIKEVKFDYYYFNEGKKNKYKDIP 80 LNISIINESDFPPFKAVDEKLHFSVLENDLKIISTNRNNSVCSIGLYVKCGSRYEEINDKVNEQGMSVMLENMAFHSTAH 160 LSHLRTIKSLEKIGATVSCNAFREHMVYSCECLKEYLPIVTNLIIGNVLFPRFLSWEMKNNVNRLNLMREKLFENNELYI 240 TELLHNTAWYNNTLGNKLYVYESSIENYTSENLRNFMLKHFSPKNMTLIGVNVEHDELTKWTSRAFQDYVPIPYTNQKEV 320 TPKYTGGFISVEDKNVKKTNIAIAYETQGGWKSSDMITLTVLQTLMGGGGSFSTGGPGKGMYSRLFLNVLNSYNFIESCM 400 AFSTQHSDTGLFGLYFTGEPSNTSDIIKAMALEFQKMNRVTDEELNRAKKSLKSFMWMSLEYKSILMEDLARQMMILNRI 480 LTGKQLSDAIDSITKEDIQRVVHNFLKTKPTVVVYGNINYSPHYDEICNILGHK 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0523100 2 -----MK|KN 0.074 . PF3D7_0523100 3 ----MKK|NI 0.087 . PF3D7_0523100 13 CLNIFYK|TK 0.074 . PF3D7_0523100 15 NIFYKTK|WR 0.068 . PF3D7_0523100 17 FYKTKWR|NI 0.091 . PF3D7_0523100 26 HNSSIVR|SK 0.152 . PF3D7_0523100 28 SSIVRSK|EN 0.065 . PF3D7_0523100 35 ENLNLQK|IY 0.061 . PF3D7_0523100 41 KIYTGEK|QN 0.059 . PF3D7_0523100 46 EKQNFNK|VS 0.079 . PF3D7_0523100 50 FNKVSFK|KE 0.065 . PF3D7_0523100 51 NKVSFKK|EK 0.092 . PF3D7_0523100 53 VSFKKEK|IE 0.070 . PF3D7_0523100 59 KIEDVIK|EV 0.064 . PF3D7_0523100 62 DVIKEVK|FD 0.061 . PF3D7_0523100 72 YYFNEGK|KN 0.055 . PF3D7_0523100 73 YFNEGKK|NK 0.081 . PF3D7_0523100 75 NEGKKNK|YK 0.079 . PF3D7_0523100 77 GKKNKYK|DI 0.086 . PF3D7_0523100 95 SDFPPFK|AV 0.104 . PF3D7_0523100 100 FKAVDEK|LH 0.068 . PF3D7_0523100 111 VLENDLK|II 0.068 . PF3D7_0523100 117 KIISTNR|NN 0.079 . PF3D7_0523100 129 SIGLYVK|CG 0.062 . PF3D7_0523100 133 YVKCGSR|YE 0.073 . PF3D7_0523100 140 YEEINDK|VN 0.067 . PF3D7_0523100 165 AHLSHLR|TI 0.079 . PF3D7_0523100 168 SHLRTIK|SL 0.333 . PF3D7_0523100 172 TIKSLEK|IG 0.057 . PF3D7_0523100 183 VSCNAFR|EH 0.077 . PF3D7_0523100 194 YSCECLK|EY 0.059 . PF3D7_0523100 212 GNVLFPR|FL 0.133 . PF3D7_0523100 219 FLSWEMK|NN 0.069 . PF3D7_0523100 224 MKNNVNR|LN 0.099 . PF3D7_0523100 229 NRLNLMR|EK 0.076 . PF3D7_0523100 231 LNLMREK|LF 0.064 . PF3D7_0523100 257 NNTLGNK|LY 0.052 . PF3D7_0523100 274 YTSENLR|NF 0.085 . PF3D7_0523100 279 LRNFMLK|HF 0.115 . PF3D7_0523100 284 LKHFSPK|NM 0.075 . PF3D7_0523100 300 EHDELTK|WT 0.068 . PF3D7_0523100 304 LTKWTSR|AF 0.092 . PF3D7_0523100 318 IPYTNQK|EV 0.090 . PF3D7_0523100 323 QKEVTPK|YT 0.100 . PF3D7_0523100 334 FISVEDK|NV 0.079 . PF3D7_0523100 337 VEDKNVK|KT 0.063 . PF3D7_0523100 338 EDKNVKK|TN 0.099 . PF3D7_0523100 352 ETQGGWK|SS 0.083 . PF3D7_0523100 379 STGGPGK|GM 0.067 . PF3D7_0523100 384 GKGMYSR|LF 0.101 . PF3D7_0523100 428 NTSDIIK|AM 0.066 . PF3D7_0523100 436 MALEFQK|MN 0.059 . PF3D7_0523100 439 EFQKMNR|VT 0.103 . PF3D7_0523100 447 TDEELNR|AK 0.073 . PF3D7_0523100 449 EELNRAK|KS 0.064 . PF3D7_0523100 450 ELNRAKK|SL 0.483 . PF3D7_0523100 453 RAKKSLK|SF 0.078 . PF3D7_0523100 463 WMSLEYK|SI 0.081 . PF3D7_0523100 472 LMEDLAR|QM 0.080 . PF3D7_0523100 479 QMMILNR|IL 0.097 . PF3D7_0523100 484 NRILTGK|QL 0.105 . PF3D7_0523100 495 AIDSITK|ED 0.056 . PF3D7_0523100 500 TKEDIQR|VV 0.132 . PF3D7_0523100 507 VVHNFLK|TK 0.062 . PF3D7_0523100 509 HNFLKTK|PT 0.070 . PF3D7_0523100 534 CNILGHK|-- 0.061 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0523100 ATGAAGAAAAATATACAATGCTTGAATATTTTTTATAAAACCAAATGGAGAAATATACAC AACAGTAGTATTGTGAGGTCAAAAGAAAATTTGAACCTTCAAAAAATATATACAGGAGAA AAACAAAATTTTAACAAAGTATCCTTTAAAAAAGAGAAAATAGAAGATGTCATTAAAGAA GTGAAGTTTGATTACTATTATTTTAATGAAGGAAAAAAAAATAAATACAAAGATATCCCA TTAAATATATCCATAATTAATGAATCGGACTTTCCGCCATTTAAGGCAGTTGATGAAAAA CTGCATTTCTCAGTATTAGAAAATGATTTGAAAATTATATCAACCAATAGAAACAATAGT GTGTGTTCGATAGGTTTATATGTAAAGTGCGGATCCAGATACGAAGAAATAAACGACAAA GTAAATGAACAAGGTATGAGCGTAATGCTTGAAAATATGGCTTTTCATAGTACGGCACAT TTATCTCATTTAAGAACCATAAAATCACTCGAAAAAATAGGAGCTACTGTTAGTTGTAAT GCATTTCGTGAACATATGGTTTATAGTTGTGAATGCTTAAAAGAATATTTACCTATTGTT ACTAATTTAATAATAGGTAATGTTTTATTTCCAAGATTTTTATCATGGGAAATGAAAAAT AATGTAAACCGTTTAAATTTAATGCGTGAGAAATTATTTGAAAATAATGAATTATATATA ACCGAATTATTACATAATACTGCATGGTATAATAATACCTTAGGTAATAAATTATATGTA TATGAATCCAGTATTGAAAATTATACATCAGAAAATTTAAGGAATTTTATGTTGAAACAT TTCTCACCAAAAAATATGACATTGATAGGTGTCAATGTAGAACATGATGAACTAACCAAA TGGACTTCTAGAGCTTTTCAAGATTATGTTCCTATACCTTATACTAATCAAAAAGAAGTA ACTCCAAAATATACAGGTGGATTTATTAGTGTAGAAGATAAAAATGTGAAGAAAACTAAT ATTGCCATCGCTTATGAAACACAAGGGGGTTGGAAAAGTTCTGATATGATCACCTTAACA GTATTACAAACATTAATGGGTGGTGGTGGCTCCTTTTCCACTGGTGGACCTGGAAAGGGT ATGTATTCAAGATTATTCTTAAATGTTTTAAATAGCTATAATTTTATTGAATCATGTATG GCCTTTAGTACTCAGCATTCAGATACTGGTCTTTTTGGATTATACTTTACGGGAGAACCA TCGAATACCTCTGATATAATAAAAGCTATGGCATTAGAATTTCAAAAAATGAATAGAGTT ACTGATGAAGAACTTAATAGAGCAAAGAAAAGCTTAAAAAGCTTTATGTGGATGAGTTTA GAATATAAATCAATATTAATGGAAGATTTAGCTAGACAAATGATGATTTTAAATAGAATA TTAACAGGAAAACAATTATCAGACGCTATCGATTCTATAACAAAGGAAGATATTCAAAGG GTTGTTCATAATTTCTTGAAAACAAAACCAACTGTTGTTGTTTATGGAAATATAAATTAT TCACCTCATTATGATGAAATATGTAACATATTAGGACACAAATAA
  • Download Fasta

  • Fasta :-

    MKKNIQCLNIFYKTKWRNIHNSSIVRSKENLNLQKIYTGEKQNFNKVSFKKEKIEDVIKE VKFDYYYFNEGKKNKYKDIPLNISIINESDFPPFKAVDEKLHFSVLENDLKIISTNRNNS VCSIGLYVKCGSRYEEINDKVNEQGMSVMLENMAFHSTAHLSHLRTIKSLEKIGATVSCN AFREHMVYSCECLKEYLPIVTNLIIGNVLFPRFLSWEMKNNVNRLNLMREKLFENNELYI TELLHNTAWYNNTLGNKLYVYESSIENYTSENLRNFMLKHFSPKNMTLIGVNVEHDELTK WTSRAFQDYVPIPYTNQKEVTPKYTGGFISVEDKNVKKTNIAIAYETQGGWKSSDMITLT VLQTLMGGGGSFSTGGPGKGMYSRLFLNVLNSYNFIESCMAFSTQHSDTGLFGLYFTGEP SNTSDIIKAMALEFQKMNRVTDEELNRAKKSLKSFMWMSLEYKSILMEDLARQMMILNRI LTGKQLSDAIDSITKEDIQRVVHNFLKTKPTVVVYGNINYSPHYDEICNILGHK

No Results
No Results
IDSitePeptideScoreMethod
PF3D7_0523100282 SLKHFSPKNM0.991unsp

MAL5P1.231      PFE1155c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India