PF3D7_0527200 | ubiquitin carboxyl-terminal hydrolase 14

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0527200OTHER0.9998770.0000310.000092
No Results

  • Fasta :-

    >PF3D7_0527200 MTLVNITVKWKNQVFNNIELDVSEPLILLKTQLWQLTNVPPEKQKLMYKGLLKDDVDLSL LNIKENDKIMLVGSAESLVEKPKDIIFEEDLTNEEKQKIHTKENIIFEEQGIVNLGNTCY FNAVLQFLTSFDDLGNFLRSYKSKESKLIKTNKDILFDSFIEFAHSFEKSSEPYVPVTLL KSFRDVYPKFKSVNLRTKQYAQQDAEECMNAILTCLNEQTDNKIIDKLFSFQIISNMKFV ETVEQHEQKEKKDEKKDEKKDEKKDEKKEEKKEEIKNINITSNNNNIDNNNDNNDNNNNN NNNSVQQNDHNNKDISHNNIFETTQEFNNKLICYMGTPNTPVNHLHEGIRLSLHEKIRKN RNEDNKECIYEKKSEINSLPPYLIVHFLRFESKKIVESNNSGVSVVTAKICRKVSFPDTF DMYDFCSEKIKEELKIARDIIMKRKDKETSLSPQKENIQNIEQNNINNQYNQNNSNDNPK HVQEHTNQINKEELIELPTGEYELISVITHKGRNEESGHYIAWKKMKKFFSSNSNIDQNE SSNKKTKNANDSLWLKMDDDKVSTHKFSSIDFYGGCSDYNIAVLLLYKRKNISCTPDEMN MDIKE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0527200.fa Sequence name : PF3D7_0527200 Sequence length : 605 VALUES OF COMPUTED PARAMETERS Coef20 : 4.077 CoefTot : -0.795 ChDiff : -12 ZoneTo : 18 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.900 1.047 -0.008 0.472 MesoH : -1.135 0.000 -0.575 0.119 MuHd_075 : 7.934 12.930 3.505 3.160 MuHd_095 : 25.809 22.785 9.047 6.573 MuHd_100 : 24.281 23.477 8.406 6.406 MuHd_105 : 19.067 18.862 6.100 4.910 Hmax_075 : 11.550 13.500 -0.709 5.098 Hmax_095 : 9.712 14.900 0.384 4.777 Hmax_100 : 9.900 15.300 0.482 4.980 Hmax_105 : 9.100 15.050 0.541 4.366 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7440 0.2560 DFMC : 0.8219 0.1781
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 605 PF3D7_0527200 MTLVNITVKWKNQVFNNIELDVSEPLILLKTQLWQLTNVPPEKQKLMYKGLLKDDVDLSLLNIKENDKIMLVGSAESLVE 80 KPKDIIFEEDLTNEEKQKIHTKENIIFEEQGIVNLGNTCYFNAVLQFLTSFDDLGNFLRSYKSKESKLIKTNKDILFDSF 160 IEFAHSFEKSSEPYVPVTLLKSFRDVYPKFKSVNLRTKQYAQQDAEECMNAILTCLNEQTDNKIIDKLFSFQIISNMKFV 240 ETVEQHEQKEKKDEKKDEKKDEKKDEKKEEKKEEIKNINITSNNNNIDNNNDNNDNNNNNNNNSVQQNDHNNKDISHNNI 320 FETTQEFNNKLICYMGTPNTPVNHLHEGIRLSLHEKIRKNRNEDNKECIYEKKSEINSLPPYLIVHFLRFESKKIVESNN 400 SGVSVVTAKICRKVSFPDTFDMYDFCSEKIKEELKIARDIIMKRKDKETSLSPQKENIQNIEQNNINNQYNQNNSNDNPK 480 HVQEHTNQINKEELIELPTGEYELISVITHKGRNEESGHYIAWKKMKKFFSSNSNIDQNESSNKKTKNANDSLWLKMDDD 560 KVSTHKFSSIDFYGGCSDYNIAVLLLYKRKNISCTPDEMNMDIKE 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............................................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0527200 9 LVNITVK|WK 0.074 . PF3D7_0527200 11 NITVKWK|NQ 0.055 . PF3D7_0527200 30 EPLILLK|TQ 0.059 . PF3D7_0527200 43 TNVPPEK|QK 0.062 . PF3D7_0527200 45 VPPEKQK|LM 0.066 . PF3D7_0527200 49 KQKLMYK|GL 0.064 . PF3D7_0527200 53 MYKGLLK|DD 0.056 . PF3D7_0527200 64 LSLLNIK|EN 0.062 . PF3D7_0527200 68 NIKENDK|IM 0.054 . PF3D7_0527200 81 AESLVEK|PK 0.074 . PF3D7_0527200 83 SLVEKPK|DI 0.095 . PF3D7_0527200 96 DLTNEEK|QK 0.059 . PF3D7_0527200 98 TNEEKQK|IH 0.070 . PF3D7_0527200 102 KQKIHTK|EN 0.078 . PF3D7_0527200 139 DLGNFLR|SY 0.127 . PF3D7_0527200 142 NFLRSYK|SK 0.181 . PF3D7_0527200 144 LRSYKSK|ES 0.087 . PF3D7_0527200 147 YKSKESK|LI 0.078 . PF3D7_0527200 150 KESKLIK|TN 0.084 . PF3D7_0527200 153 KLIKTNK|DI 0.069 . PF3D7_0527200 169 FAHSFEK|SS 0.096 . PF3D7_0527200 181 VPVTLLK|SF 0.090 . PF3D7_0527200 184 TLLKSFR|DV 0.277 . PF3D7_0527200 189 FRDVYPK|FK 0.085 . PF3D7_0527200 191 DVYPKFK|SV 0.095 . PF3D7_0527200 196 FKSVNLR|TK 0.114 . PF3D7_0527200 198 SVNLRTK|QY 0.075 . PF3D7_0527200 223 NEQTDNK|II 0.067 . PF3D7_0527200 227 DNKIIDK|LF 0.062 . PF3D7_0527200 238 QIISNMK|FV 0.114 . PF3D7_0527200 249 VEQHEQK|EK 0.071 . PF3D7_0527200 251 QHEQKEK|KD 0.066 . PF3D7_0527200 252 HEQKEKK|DE 0.152 . PF3D7_0527200 255 KEKKDEK|KD 0.065 . PF3D7_0527200 256 EKKDEKK|DE 0.122 . PF3D7_0527200 259 DEKKDEK|KD 0.061 . PF3D7_0527200 260 EKKDEKK|DE 0.116 . PF3D7_0527200 263 DEKKDEK|KD 0.066 . PF3D7_0527200 264 EKKDEKK|DE 0.134 . PF3D7_0527200 267 DEKKDEK|KE 0.066 . PF3D7_0527200 268 EKKDEKK|EE 0.095 . PF3D7_0527200 271 DEKKEEK|KE 0.063 . PF3D7_0527200 272 EKKEEKK|EE 0.095 . PF3D7_0527200 276 EKKEEIK|NI 0.059 . PF3D7_0527200 313 QNDHNNK|DI 0.083 . PF3D7_0527200 330 TQEFNNK|LI 0.069 . PF3D7_0527200 350 HLHEGIR|LS 0.073 . PF3D7_0527200 356 RLSLHEK|IR 0.062 . PF3D7_0527200 358 SLHEKIR|KN 0.101 . PF3D7_0527200 359 LHEKIRK|NR 0.068 . PF3D7_0527200 361 EKIRKNR|NE 0.340 . PF3D7_0527200 366 NRNEDNK|EC 0.072 . PF3D7_0527200 372 KECIYEK|KS 0.057 . PF3D7_0527200 373 ECIYEKK|SE 0.135 . PF3D7_0527200 389 LIVHFLR|FE 0.136 . PF3D7_0527200 393 FLRFESK|KI 0.068 . PF3D7_0527200 394 LRFESKK|IV 0.197 . PF3D7_0527200 409 VSVVTAK|IC 0.067 . PF3D7_0527200 412 VTAKICR|KV 0.098 . PF3D7_0527200 413 TAKICRK|VS 0.083 . PF3D7_0527200 429 YDFCSEK|IK 0.059 . PF3D7_0527200 431 FCSEKIK|EE 0.072 . PF3D7_0527200 435 KIKEELK|IA 0.070 . PF3D7_0527200 438 EELKIAR|DI 0.126 . PF3D7_0527200 443 ARDIIMK|RK 0.063 . PF3D7_0527200 444 RDIIMKR|KD 0.115 . PF3D7_0527200 445 DIIMKRK|DK 0.138 . PF3D7_0527200 447 IMKRKDK|ET 0.143 . PF3D7_0527200 455 TSLSPQK|EN 0.065 . PF3D7_0527200 480 NSNDNPK|HV 0.102 . PF3D7_0527200 491 HTNQINK|EE 0.063 . PF3D7_0527200 511 ISVITHK|GR 0.067 . PF3D7_0527200 513 VITHKGR|NE 0.090 . PF3D7_0527200 524 GHYIAWK|KM 0.066 . PF3D7_0527200 525 HYIAWKK|MK 0.077 . PF3D7_0527200 527 IAWKKMK|KF 0.078 . PF3D7_0527200 528 AWKKMKK|FF 0.109 . PF3D7_0527200 544 QNESSNK|KT 0.069 . PF3D7_0527200 545 NESSNKK|TK 0.093 . PF3D7_0527200 547 SSNKKTK|NA 0.123 . PF3D7_0527200 556 NDSLWLK|MD 0.076 . PF3D7_0527200 561 LKMDDDK|VS 0.065 . PF3D7_0527200 566 DKVSTHK|FS 0.071 . PF3D7_0527200 588 AVLLLYK|RK 0.051 . PF3D7_0527200 589 VLLLYKR|KN 0.106 . PF3D7_0527200 590 LLLYKRK|NI 0.096 . PF3D7_0527200 604 EMNMDIK|E- 0.069 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0527200 ATGACATTGGTTAATATAACGGTAAAATGGAAAAATCAGGTTTTCAATAACATAGAGCTT GATGTATCTGAGCCGCTTATTTTATTAAAAACTCAGTTGTGGCAACTGACGAATGTCCCG CCAGAAAAACAGAAATTAATGTACAAAGGATTATTGAAAGATGATGTTGATTTATCTTTA TTAAACATAAAAGAAAACGACAAGATTATGCTTGTAGGTTCCGCAGAATCATTAGTTGAG AAACCAAAAGATATAATATTTGAAGAAGATTTAACAAATGAAGAAAAACAAAAAATTCAT ACAAAAGAAAATATTATATTTGAAGAACAGGGTATTGTTAATCTTGGAAACACATGTTAT TTTAATGCGGTATTACAATTTTTAACATCTTTTGATGATTTAGGAAATTTTCTTAGAAGC TATAAATCAAAAGAAAGTAAATTAATTAAAACAAATAAAGATATATTATTTGATTCTTTT ATAGAATTTGCTCATTCATTTGAGAAATCATCAGAACCATATGTTCCTGTAACTTTGTTA AAATCTTTTAGAGATGTATATCCAAAATTTAAAAGTGTTAATTTAAGAACGAAACAATAT GCACAACAAGATGCTGAGGAATGTATGAATGCAATTTTAACTTGTTTAAATGAACAAACG GATAATAAAATTATCGACAAATTGTTTTCTTTTCAAATTATTAGTAATATGAAATTTGTG GAAACTGTTGAACAACATGAACAAAAAGAAAAGAAGGATGAAAAGAAGGATGAAAAGAAG GATGAAAAGAAGGATGAAAAAAAGGAAGAAAAAAAGGAAGAAATCAAAAATATAAATATT ACAAGTAATAATAATAATATCGACAACAATAATGACAATAATGACAATAATAATAATAAT AATAATAATAGTGTACAGCAAAATGATCATAATAATAAAGATATATCCCATAACAATATT TTTGAAACTACACAAGAATTTAATAACAAACTAATATGTTATATGGGTACACCTAATACA CCCGTAAATCATCTACATGAAGGTATACGGTTATCATTACATGAGAAAATAAGAAAAAAT AGAAATGAAGATAATAAGGAATGTATATATGAAAAAAAGTCAGAAATTAATTCCTTACCT CCTTATTTAATTGTACATTTCTTACGATTTGAATCGAAAAAAATTGTAGAATCCAATAAT AGCGGAGTGTCTGTTGTTACAGCCAAAATTTGTAGAAAAGTTTCATTTCCTGATACTTTT GATATGTATGATTTCTGTTCAGAAAAAATTAAAGAGGAACTAAAAATTGCCAGAGATATC ATTATGAAAAGAAAGGATAAAGAAACTTCATTATCTCCTCAAAAGGAAAATATACAAAAT ATAGAACAAAATAATATCAACAATCAATACAATCAAAATAACTCTAATGATAACCCAAAA CATGTACAGGAACATACAAACCAAATAAATAAAGAAGAACTTATTGAACTACCTACAGGA GAATATGAACTTATTTCGGTAATTACACATAAAGGTAGAAATGAAGAAAGTGGTCATTAT ATTGCTTGGAAAAAAATGAAAAAATTTTTTTCTTCAAATTCTAACATAGATCAAAATGAA TCAAGTAATAAAAAAACTAAAAATGCAAATGATTCTTTATGGTTAAAAATGGATGATGAT AAAGTCAGCACTCATAAATTCTCTTCCATAGATTTCTATGGAGGATGTAGTGATTACAAT ATCGCAGTCTTATTGTTATATAAGAGAAAAAATATATCATGTACACCAGATGAAATGAAT ATGGATATTAAGGAATAA
  • Download Fasta

  • Fasta :-

    MTLVNITVKWKNQVFNNIELDVSEPLILLKTQLWQLTNVPPEKQKLMYKGLLKDDVDLSL LNIKENDKIMLVGSAESLVEKPKDIIFEEDLTNEEKQKIHTKENIIFEEQGIVNLGNTCY FNAVLQFLTSFDDLGNFLRSYKSKESKLIKTNKDILFDSFIEFAHSFEKSSEPYVPVTLL KSFRDVYPKFKSVNLRTKQYAQQDAEECMNAILTCLNEQTDNKIIDKLFSFQIISNMKFV ETVEQHEQKEKKDEKKDEKKDEKKDEKKEEKKEEIKNINITSNNNNIDNNNDNNDNNNNN NNNSVQQNDHNNKDISHNNIFETTQEFNNKLICYMGTPNTPVNHLHEGIRLSLHEKIRKN RNEDNKECIYEKKSEINSLPPYLIVHFLRFESKKIVESNNSGVSVVTAKICRKVSFPDTF DMYDFCSEKIKEELKIARDIIMKRKDKETSLSPQKENIQNIEQNNINNQYNQNNSNDNPK HVQEHTNQINKEELIELPTGEYELISVITHKGRNEESGHYIAWKKMKKFFSSNSNIDQNE SSNKKTKNANDSLWLKMDDDKVSTHKFSSIDFYGGCSDYNIAVLLLYKRKNISCTPDEMN MDIKE

  • title: Active Site
  • coordinates: N114,C119,H519,D559
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0527200415 SCRKVSFPDT0.997unspPF3D7_0527200415 SCRKVSFPDT0.997unspPF3D7_0527200415 SCRKVSFPDT0.997unspPF3D7_0527200568 STHKFSSIDF0.991unspPF3D7_0527200166 SEFAHSFEKS0.993unspPF3D7_0527200374 SYEKKSEINS0.99unsp

MAL5P1.271      PFE1355c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India