_IDPredictionOTHERSPmTPCS_Position
PF3D7_0629300SP0.2051770.7933920.001431CS pos: 21-22. SGT-SY. Pr: 0.3035
No Results
  • Fasta :-

    >PF3D7_0629300 MSSILLFFVVFQYLLISFSGTSYKRFVVDGASIFLRNPYKITLGKSEKKGKVFSEFSEEE DSIVRRDTEKKKKWFGKGNDVNKKVKEKKNVILEEKQIGKEENNLVGQQNDSVGQQNDSV GQQNDSVGQQNDPVGQQNDSVGQQNDPVGQQNDPVGQQNDYVGQQNDSVGQQNDYVGQQN DYVGQQNDPVGQQNDSVGQQNDYVGQQNDPVGQQNDPVGQQNDPVGQQNDSVGQQNDYVG QQNDPVGQQNDYVGQQNDYVGQQNDPVGQQNDPVGQQNDPVEQEDNVGIVKKEKKEKIIV EKENEIGVIERENISGVEVINKDSEEDIYNSNVDKNFPADDNNRDEILVRRKKVSNKDSL FMNDIIRGENEDNDDDNEEEEEKVSKNLENVKLGELSKLQYIFGTNITDNDDDSEIRSES EIDDIDELDEEEYDWTEHVYNYKPTTYLLPGLGGSTLIAEYKNATIHSCSRYLLNSKPFR IWISLSRLLSIQSNIYCTFDTIRLKYDEKKNIYYNQPGVFIDVEKFGNLKGIEYLDYFNN TGIGITKYFNVVGQYFTSHGYVDGESIIGAPYDWRYPLSQQNYKILKEHIEYIYEKRNGT KVNLIGHSLGGLYLNFFLSRVVSKKWKQKHLSKIIFISTPFKGSVKTIRALIQSRKDFIS FRITKLIKLSIPESMMKALGNSLGSLFDILPYREYYKRDQVVILINMSNTPIDEDHVQYL VTLCGIYKPECYRNRADVNLKVYTLKNWHELLDDKLKAKYENYKLYRERYYNKDHGVPIY CLYSTINKKETEYLLYFETQNTREEPTIYYGTGDGTVGTESLQACSNFYNTVLTHHFSDT SHVGILYTNETAKYIYDIVESPN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0629300.fa Sequence name : PF3D7_0629300 Sequence length : 863 VALUES OF COMPUTED PARAMETERS Coef20 : 4.665 CoefTot : -0.413 ChDiff : -37 ZoneTo : 46 KR : 5 DE : 1 CleavSite : 27 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.047 2.176 0.312 0.808 MesoH : -0.693 0.292 -0.409 0.182 MuHd_075 : 31.811 18.892 7.232 5.833 MuHd_095 : 49.035 21.476 11.716 10.380 MuHd_100 : 47.112 22.522 11.106 9.914 MuHd_105 : 34.135 19.309 8.153 7.477 Hmax_075 : 13.400 28.350 2.216 4.165 Hmax_095 : 15.500 14.100 2.522 6.120 Hmax_100 : 14.800 14.900 2.475 6.000 Hmax_105 : 16.200 19.700 3.279 6.640 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6658 0.3342 DFMC : 0.5115 0.4885
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 863 PF3D7_0629300 MSSILLFFVVFQYLLISFSGTSYKRFVVDGASIFLRNPYKITLGKSEKKGKVFSEFSEEEDSIVRRDTEKKKKWFGKGND 80 VNKKVKEKKNVILEEKQIGKEENNLVGQQNDSVGQQNDSVGQQNDSVGQQNDPVGQQNDSVGQQNDPVGQQNDPVGQQND 160 YVGQQNDSVGQQNDYVGQQNDYVGQQNDPVGQQNDSVGQQNDYVGQQNDPVGQQNDPVGQQNDPVGQQNDSVGQQNDYVG 240 QQNDPVGQQNDYVGQQNDYVGQQNDPVGQQNDPVGQQNDPVEQEDNVGIVKKEKKEKIIVEKENEIGVIERENISGVEVI 320 NKDSEEDIYNSNVDKNFPADDNNRDEILVRRKKVSNKDSLFMNDIIRGENEDNDDDNEEEEEKVSKNLENVKLGELSKLQ 400 YIFGTNITDNDDDSEIRSESEIDDIDELDEEEYDWTEHVYNYKPTTYLLPGLGGSTLIAEYKNATIHSCSRYLLNSKPFR 480 IWISLSRLLSIQSNIYCTFDTIRLKYDEKKNIYYNQPGVFIDVEKFGNLKGIEYLDYFNNTGIGITKYFNVVGQYFTSHG 560 YVDGESIIGAPYDWRYPLSQQNYKILKEHIEYIYEKRNGTKVNLIGHSLGGLYLNFFLSRVVSKKWKQKHLSKIIFISTP 640 FKGSVKTIRALIQSRKDFISFRITKLIKLSIPESMMKALGNSLGSLFDILPYREYYKRDQVVILINMSNTPIDEDHVQYL 720 VTLCGIYKPECYRNRADVNLKVYTLKNWHELLDDKLKAKYENYKLYRERYYNKDHGVPIYCLYSTINKKETEYLLYFETQ 800 NTREEPTIYYGTGDGTVGTESLQACSNFYNTVLTHHFSDTSHVGILYTNETAKYIYDIVESPN 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ............................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0629300 24 FSGTSYK|RF 0.061 . PF3D7_0629300 25 SGTSYKR|FV 0.291 . PF3D7_0629300 36 GASIFLR|NP 0.115 . PF3D7_0629300 40 FLRNPYK|IT 0.064 . PF3D7_0629300 45 YKITLGK|SE 0.078 . PF3D7_0629300 48 TLGKSEK|KG 0.058 . PF3D7_0629300 49 LGKSEKK|GK 0.105 . PF3D7_0629300 51 KSEKKGK|VF 0.070 . PF3D7_0629300 65 EEDSIVR|RD 0.061 . PF3D7_0629300 66 EDSIVRR|DT 0.427 . PF3D7_0629300 70 VRRDTEK|KK 0.067 . PF3D7_0629300 71 RRDTEKK|KK 0.099 . PF3D7_0629300 72 RDTEKKK|KW 0.127 . PF3D7_0629300 73 DTEKKKK|WF 0.165 . PF3D7_0629300 77 KKKWFGK|GN 0.091 . PF3D7_0629300 83 KGNDVNK|KV 0.084 . PF3D7_0629300 84 GNDVNKK|VK 0.110 . PF3D7_0629300 86 DVNKKVK|EK 0.068 . PF3D7_0629300 88 NKKVKEK|KN 0.067 . PF3D7_0629300 89 KKVKEKK|NV 0.207 . PF3D7_0629300 96 NVILEEK|QI 0.082 . PF3D7_0629300 100 EEKQIGK|EE 0.058 . PF3D7_0629300 291 DNVGIVK|KE 0.055 . PF3D7_0629300 292 NVGIVKK|EK 0.111 . PF3D7_0629300 294 GIVKKEK|KE 0.063 . PF3D7_0629300 295 IVKKEKK|EK 0.121 . PF3D7_0629300 297 KKEKKEK|II 0.087 . PF3D7_0629300 302 EKIIVEK|EN 0.074 . PF3D7_0629300 311 EIGVIER|EN 0.089 . PF3D7_0629300 322 GVEVINK|DS 0.072 . PF3D7_0629300 335 YNSNVDK|NF 0.068 . PF3D7_0629300 344 PADDNNR|DE 0.082 . PF3D7_0629300 350 RDEILVR|RK 0.078 . PF3D7_0629300 351 DEILVRR|KK 0.100 . PF3D7_0629300 352 EILVRRK|KV 0.098 . PF3D7_0629300 353 ILVRRKK|VS 0.186 . PF3D7_0629300 357 RKKVSNK|DS 0.076 . PF3D7_0629300 367 FMNDIIR|GE 0.081 . PF3D7_0629300 383 NEEEEEK|VS 0.055 . PF3D7_0629300 386 EEEKVSK|NL 0.071 . PF3D7_0629300 392 KNLENVK|LG 0.059 . PF3D7_0629300 398 KLGELSK|LQ 0.060 . PF3D7_0629300 417 DDDSEIR|SE 0.103 . PF3D7_0629300 443 EHVYNYK|PT 0.069 . PF3D7_0629300 462 TLIAEYK|NA 0.069 . PF3D7_0629300 471 TIHSCSR|YL 0.090 . PF3D7_0629300 477 RYLLNSK|PF 0.056 . PF3D7_0629300 480 LNSKPFR|IW 0.106 . PF3D7_0629300 487 IWISLSR|LL 0.084 . PF3D7_0629300 503 CTFDTIR|LK 0.078 . PF3D7_0629300 505 FDTIRLK|YD 0.062 . PF3D7_0629300 509 RLKYDEK|KN 0.058 . PF3D7_0629300 510 LKYDEKK|NI 0.130 . PF3D7_0629300 525 VFIDVEK|FG 0.062 . PF3D7_0629300 530 EKFGNLK|GI 0.061 . PF3D7_0629300 547 TGIGITK|YF 0.074 . PF3D7_0629300 575 GAPYDWR|YP 0.081 . PF3D7_0629300 584 LSQQNYK|IL 0.069 . PF3D7_0629300 587 QNYKILK|EH 0.059 . PF3D7_0629300 596 IEYIYEK|RN 0.072 . PF3D7_0629300 597 EYIYEKR|NG 0.133 . PF3D7_0629300 601 EKRNGTK|VN 0.062 . PF3D7_0629300 620 LNFFLSR|VV 0.144 . PF3D7_0629300 624 LSRVVSK|KW 0.080 . PF3D7_0629300 625 SRVVSKK|WK 0.162 . PF3D7_0629300 627 VVSKKWK|QK 0.076 . PF3D7_0629300 629 SKKWKQK|HL 0.114 . PF3D7_0629300 633 KQKHLSK|II 0.071 . PF3D7_0629300 642 FISTPFK|GS 0.073 . PF3D7_0629300 646 PFKGSVK|TI 0.064 . PF3D7_0629300 649 GSVKTIR|AL 0.147 . PF3D7_0629300 655 RALIQSR|KD 0.083 . PF3D7_0629300 656 ALIQSRK|DF 0.096 . PF3D7_0629300 662 KDFISFR|IT 0.088 . PF3D7_0629300 665 ISFRITK|LI 0.121 . PF3D7_0629300 668 RITKLIK|LS 0.060 . PF3D7_0629300 677 IPESMMK|AL 0.085 . PF3D7_0629300 693 FDILPYR|EY 0.078 . PF3D7_0629300 697 PYREYYK|RD 0.058 . PF3D7_0629300 698 YREYYKR|DQ 0.223 . PF3D7_0629300 728 TLCGIYK|PE 0.058 . PF3D7_0629300 733 YKPECYR|NR 0.072 . PF3D7_0629300 735 PECYRNR|AD 0.075 . PF3D7_0629300 741 RADVNLK|VY 0.057 . PF3D7_0629300 746 LKVYTLK|NW 0.072 . PF3D7_0629300 755 HELLDDK|LK 0.057 . PF3D7_0629300 757 LLDDKLK|AK 0.062 . PF3D7_0629300 759 DDKLKAK|YE 0.069 . PF3D7_0629300 764 AKYENYK|LY 0.060 . PF3D7_0629300 767 ENYKLYR|ER 0.081 . PF3D7_0629300 769 YKLYRER|YY 0.094 . PF3D7_0629300 773 RERYYNK|DH 0.076 . PF3D7_0629300 788 LYSTINK|KE 0.060 . PF3D7_0629300 789 YSTINKK|ET 0.093 . PF3D7_0629300 803 FETQNTR|EE 0.067 . PF3D7_0629300 853 YTNETAK|YI 0.095 . ____________________________^_________________
  • Fasta :-

    >PF3D7_0629300 ATGTCCTCCATATTACTTTTTTTCGTAGTTTTTCAATATTTGTTAATTTCGTTTTCTGGT ACGTCTTACAAAAGGTTTGTAGTAGATGGAGCTTCAATTTTTTTAAGAAATCCCTACAAA ATAACTTTGGGGAAATCAGAAAAAAAGGGAAAAGTTTTTAGCGAGTTTTCGGAGGAGGAA GATTCAATAGTTCGTCGCGACACAGAAAAAAAAAAAAAGTGGTTTGGAAAAGGGAATGAT GTAAATAAAAAGGTAAAGGAGAAGAAGAATGTTATTCTAGAAGAAAAACAAATTGGTAAG GAGGAAAATAATTTGGTTGGACAACAAAACGATTCGGTTGGACAACAAAACGATTCGGTT GGACAACAAAACGATTCGGTTGGACAACAAAACGATCCGGTTGGACAACAAAACGATTCG GTTGGACAACAAAACGATCCGGTTGGACAACAAAACGATCCGGTTGGACAACAAAATGAT TATGTTGGACAACAAAACGATTCGGTTGGACAACAAAATGATTATGTTGGACAACAAAAT GATTATGTTGGACAACAAAACGATCCGGTTGGACAACAAAACGATTCGGTTGGACAACAA AATGATTATGTTGGACAACAAAACGATCCGGTTGGACAACAAAACGATCCGGTTGGACAA CAAAACGATCCGGTTGGACAACAAAACGATTCGGTTGGACAACAAAATGATTATGTTGGA CAACAAAACGATCCGGTTGGACAACAAAATGATTATGTTGGACAACAAAATGATTATGTT GGACAACAAAATGATCCGGTTGGACAACAAAACGATCCGGTTGGACAACAAAACGATCCG GTTGAACAAGAAGACAACGTTGGTATTGTAAAAAAGGAAAAAAAAGAAAAAATTATTGTA GAGAAAGAAAACGAAATAGGAGTAATTGAAAGAGAAAATATTTCTGGTGTAGAAGTAATT AATAAAGATAGTGAAGAAGATATTTATAATTCAAATGTGGATAAGAATTTCCCCGCTGAT GATAATAATAGAGATGAAATTTTGGTAAGGAGAAAAAAGGTTTCTAATAAAGATAGCTTA TTTATGAATGATATAATACGAGGAGAAAACGAAGATAATGATGATGATAATGAGGAGGAG GAAGAAAAAGTAAGTAAAAATTTGGAAAATGTAAAATTAGGTGAATTATCTAAATTACAA TATATTTTTGGAACAAATATTACAGATAATGATGATGATAGTGAGATTCGTAGTGAAAGT GAAATAGATGATATAGATGAATTAGATGAAGAAGAATATGATTGGACGGAGCATGTATAT AATTATAAGCCTACCACTTATTTATTACCTGGGTTGGGAGGAAGTACATTAATAGCAGAA TATAAGAATGCAACAATTCATAGTTGTAGTAGGTATTTATTGAATTCGAAACCTTTTCGT ATTTGGATAAGTTTAAGTAGATTACTTTCTATTCAATCGAATATATATTGTACGTTTGAT ACAATACGTTTAAAATATGATGAGAAAAAGAATATATATTATAATCAACCAGGAGTATTT ATAGATGTCGAGAAGTTTGGTAATCTTAAGGGTATAGAATATTTAGATTATTTTAATAAT ACAGGTATAGGAATAACAAAATATTTTAATGTGGTTGGACAATATTTTACATCTCATGGA TATGTGGATGGAGAAAGTATTATAGGAGCTCCATATGATTGGAGATATCCATTAAGTCAA CAAAATTATAAAATTCTTAAAGAACATATAGAATATATATATGAGAAGAGAAATGGTACA AAGGTTAATTTAATAGGACATAGTTTGGGAGGTTTATATTTAAATTTCTTCTTAAGTCGT GTAGTAAGCAAAAAATGGAAGCAAAAACATCTGAGTAAAATTATATTTATTAGTACACCT TTTAAAGGATCTGTTAAAACAATAAGGGCATTAATTCAAAGTAGGAAAGATTTCATATCA TTTAGAATTACAAAGTTGATAAAATTATCCATACCAGAAAGTATGATGAAAGCATTAGGT AATTCATTAGGTTCGTTATTCGATATTTTACCTTATAGGGAATATTATAAAAGAGATCAA GTTGTGATATTAATAAATATGAGTAATACACCTATTGATGAAGATCATGTTCAATATCTA GTTACATTATGTGGTATTTATAAACCTGAATGTTATCGTAATAGAGCAGATGTAAATTTA AAAGTCTATACATTAAAAAATTGGCATGAATTATTAGATGATAAATTAAAAGCCAAATAT GAAAATTATAAATTATATAGAGAAAGATATTATAATAAAGACCATGGAGTACCTATATAT TGTCTATATAGTACTATTAATAAAAAAGAAACTGAATACTTATTATATTTTGAAACACAA AATACACGTGAAGAACCTACTATATATTATGGTACAGGAGATGGTACTGTAGGTACGGAA AGTTTACAAGCATGTAGTAATTTTTACAATACTGTATTAACTCATCACTTTTCTGATACT AGTCACGTTGGAATATTGTATACTAATGAAACGGCTAAGTATATATACGACATTGTAGAA AGTCCAAATTAA
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  • Fasta :-

    MSSILLFFVVFQYLLISFSGTSYKRFVVDGASIFLRNPYKITLGKSEKKGKVFSEFSEEE DSIVRRDTEKKKKWFGKGNDVNKKVKEKKNVILEEKQIGKEENNLVGQQNDSVGQQNDSV GQQNDSVGQQNDPVGQQNDSVGQQNDPVGQQNDPVGQQNDYVGQQNDSVGQQNDYVGQQN DYVGQQNDPVGQQNDSVGQQNDYVGQQNDPVGQQNDPVGQQNDPVGQQNDSVGQQNDYVG QQNDPVGQQNDYVGQQNDYVGQQNDPVGQQNDPVGQQNDPVEQEDNVGIVKKEKKEKIIV EKENEIGVIERENISGVEVINKDSEEDIYNSNVDKNFPADDNNRDEILVRRKKVSNKDSL FMNDIIRGENEDNDDDNEEEEEKVSKNLENVKLGELSKLQYIFGTNITDNDDDSEIRSES EIDDIDELDEEEYDWTEHVYNYKPTTYLLPGLGGSTLIAEYKNATIHSCSRYLLNSKPFR IWISLSRLLSIQSNIYCTFDTIRLKYDEKKNIYYNQPGVFIDVEKFGNLKGIEYLDYFNN TGIGITKYFNVVGQYFTSHGYVDGESIIGAPYDWRYPLSQQNYKILKEHIEYIYEKRNGT KVNLIGHSLGGLYLNFFLSRVVSKKWKQKHLSKIIFISTPFKGSVKTIRALIQSRKDFIS FRITKLIKLSIPESMMKALGNSLGSLFDILPYREYYKRDQVVILINMSNTPIDEDHVQYL VTLCGIYKPECYRNRADVNLKVYTLKNWHELLDDKLKAKYENYKLYRERYYNKDHGVPIY CLYSTINKKETEYLLYFETQNTREEPTIYYGTGDGTVGTESLQACSNFYNTVLTHHFSDT SHVGILYTNETAKYIYDIVESPN

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_062930057 SFSEFSEEED0.991unspPF3D7_062930057 SFSEFSEEED0.991unspPF3D7_062930057 SFSEFSEEED0.991unspPF3D7_062930068 TVRRDTEKKK0.996unspPF3D7_0629300324 SINKDSEEDI0.995unspPF3D7_0629300355 SRKKVSNKDS0.998unspPF3D7_0629300414 SNDDDSEIRS0.996unspPF3D7_0629300418 SSEIRSESEI0.993unspPF3D7_0629300420 SIRSESEIDD0.997unspPF3D7_062930022 SFSGTSYKRF0.994unspPF3D7_062930046 STLGKSEKKG0.996unsp

2270.t00181      MAL6P1.135      PFF1420w      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India