PF3D7_0702200 | lysophospholipase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:  GO:0016787      

  • Curated_GO_Functions:  hydrolase activity      

  • Curated_GO_Processes:  phospholipid metabolic process      

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0702200OTHER0.9998430.0001430.000014
No Results

  • Fasta :-

    >PF3D7_0702200 MVSNELNCEPYKRNNTKLDGTTSINSFYNRDGLLLRTYSWIVKGAIGIFVLVHGLNSHIR FEFLRHNADIVSNDKVIIKDLDDYYIYKDSWIEKLNEKGYSVYGLDLQGHGESEGWENLR TNVKDFDDLVYDFIQYINIINDSVQSENEDNNSSLNMIENCTGDIGVYEHNTKESHLFEN VKDVNGVSECDTIQVHSCENSVTKNNKHCPVPIYIMGLSMGGNIVLRALELLEKEIHPKK YMNIKGCISLSGMIMLEKLSSVNSIKFKGVYDIMKFVGNHFPKNRLFKRFKFSKHPYIND LIYYDKLRYQKWITGQFAFQIFKAIENLREDINFIPKNIPLLFVHSKDDSVCSFEGAMEF YNDLDMNNKEFYPLDIMEHMLPMEPGNEQVLGKILDWISNLNNNDNTSEYNTIGDVTKVE EYIE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0702200.fa Sequence name : PF3D7_0702200 Sequence length : 424 VALUES OF COMPUTED PARAMETERS Coef20 : 3.217 CoefTot : -0.022 ChDiff : -18 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.447 1.665 0.244 0.688 MesoH : -0.611 0.387 -0.411 0.219 MuHd_075 : 22.529 9.667 3.901 4.818 MuHd_095 : 20.587 7.213 4.561 3.528 MuHd_100 : 13.113 1.408 2.274 1.701 MuHd_105 : 8.475 8.296 2.223 2.702 Hmax_075 : -8.983 -2.975 -5.259 0.700 Hmax_095 : -1.487 0.962 -2.594 1.698 Hmax_100 : -6.900 -3.000 -3.785 -0.050 Hmax_105 : -6.900 -1.750 -3.785 -0.050 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8958 0.1042 DFMC : 0.9150 0.0850
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 424 PF3D7_0702200 MVSNELNCEPYKRNNTKLDGTTSINSFYNRDGLLLRTYSWIVKGAIGIFVLVHGLNSHIRFEFLRHNADIVSNDKVIIKD 80 LDDYYIYKDSWIEKLNEKGYSVYGLDLQGHGESEGWENLRTNVKDFDDLVYDFIQYINIINDSVQSENEDNNSSLNMIEN 160 CTGDIGVYEHNTKESHLFENVKDVNGVSECDTIQVHSCENSVTKNNKHCPVPIYIMGLSMGGNIVLRALELLEKEIHPKK 240 YMNIKGCISLSGMIMLEKLSSVNSIKFKGVYDIMKFVGNHFPKNRLFKRFKFSKHPYINDLIYYDKLRYQKWITGQFAFQ 320 IFKAIENLREDINFIPKNIPLLFVHSKDDSVCSFEGAMEFYNDLDMNNKEFYPLDIMEHMLPMEPGNEQVLGKILDWISN 400 LNNNDNTSEYNTIGDVTKVEEYIE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0702200 12 LNCEPYK|RN 0.072 . PF3D7_0702200 13 NCEPYKR|NN 0.171 . PF3D7_0702200 17 YKRNNTK|LD 0.074 . PF3D7_0702200 30 INSFYNR|DG 0.101 . PF3D7_0702200 36 RDGLLLR|TY 0.106 . PF3D7_0702200 43 TYSWIVK|GA 0.087 . PF3D7_0702200 60 GLNSHIR|FE 0.099 . PF3D7_0702200 65 IRFEFLR|HN 0.111 . PF3D7_0702200 75 DIVSNDK|VI 0.059 . PF3D7_0702200 79 NDKVIIK|DL 0.078 . PF3D7_0702200 88 DDYYIYK|DS 0.070 . PF3D7_0702200 94 KDSWIEK|LN 0.080 . PF3D7_0702200 98 IEKLNEK|GY 0.068 . PF3D7_0702200 120 EGWENLR|TN 0.075 . PF3D7_0702200 124 NLRTNVK|DF 0.077 . PF3D7_0702200 173 VYEHNTK|ES 0.060 . PF3D7_0702200 182 HLFENVK|DV 0.087 . PF3D7_0702200 204 CENSVTK|NN 0.065 . PF3D7_0702200 207 SVTKNNK|HC 0.061 . PF3D7_0702200 227 GGNIVLR|AL 0.113 . PF3D7_0702200 234 ALELLEK|EI 0.062 . PF3D7_0702200 239 EKEIHPK|KY 0.072 . PF3D7_0702200 240 KEIHPKK|YM 0.114 . PF3D7_0702200 245 KKYMNIK|GC 0.070 . PF3D7_0702200 258 GMIMLEK|LS 0.058 . PF3D7_0702200 266 SSVNSIK|FK 0.086 . PF3D7_0702200 268 VNSIKFK|GV 0.144 . PF3D7_0702200 275 GVYDIMK|FV 0.104 . PF3D7_0702200 283 VGNHFPK|NR 0.064 . PF3D7_0702200 285 NHFPKNR|LF 0.085 . PF3D7_0702200 288 PKNRLFK|RF 0.135 . PF3D7_0702200 289 KNRLFKR|FK 0.279 . PF3D7_0702200 291 RLFKRFK|FS 0.066 . PF3D7_0702200 294 KRFKFSK|HP 0.072 . PF3D7_0702200 306 DLIYYDK|LR 0.060 . PF3D7_0702200 308 IYYDKLR|YQ 0.108 . PF3D7_0702200 311 DKLRYQK|WI 0.142 . PF3D7_0702200 323 FAFQIFK|AI 0.066 . PF3D7_0702200 329 KAIENLR|ED 0.074 . PF3D7_0702200 337 DINFIPK|NI 0.061 . PF3D7_0702200 347 LLFVHSK|DD 0.079 . PF3D7_0702200 369 DLDMNNK|EF 0.059 . PF3D7_0702200 393 NEQVLGK|IL 0.071 . PF3D7_0702200 418 TIGDVTK|VE 0.071 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0702200 ATGGTATCTAATGAATTAAATTGTGAACCGTACAAAAGAAATAATACCAAATTAGATGGC ACAACAAGTATAAATTCCTTTTATAATAGAGATGGTTTATTATTAAGAACATATTCATGG ATAGTAAAAGGAGCTATCGGTATATTTGTATTAGTACATGGTTTAAATTCACATATAAGG TTCGAATTTTTAAGACACAATGCAGATATAGTTAGTAATGATAAGGTAATAATAAAAGAC TTAGATGATTATTATATATACAAAGATAGTTGGATAGAAAAATTAAATGAGAAAGGTTAT TCAGTCTATGGTTTAGATTTACAAGGGCATGGAGAATCTGAAGGATGGGAAAATTTAAGA ACGAATGTAAAAGATTTTGATGATTTAGTATATGATTTTATACAATATATTAATATAATT AATGATTCTGTACAATCTGAAAATGAGGATAATAATTCTTCATTAAATATGATTGAAAAT TGTACGGGTGATATTGGTGTATATGAACATAATACTAAAGAAAGTCATTTATTTGAAAAT GTTAAGGACGTAAATGGTGTATCAGAATGTGATACTATACAAGTTCATTCATGTGAGAAT AGTGTAACTAAAAATAATAAACATTGCCCTGTTCCAATATATATCATGGGGTTATCTATG GGAGGAAATATAGTTTTAAGAGCTCTAGAATTATTAGAAAAAGAAATACACCCGAAGAAA TATATGAATATAAAAGGTTGTATATCTTTATCTGGAATGATAATGCTTGAAAAATTATCG TCAGTCAATTCTATTAAATTTAAAGGTGTGTATGATATAATGAAATTTGTGGGTAATCAT TTTCCGAAAAATAGACTTTTTAAAAGATTCAAATTTTCTAAACATCCATATATTAATGAT CTTATATATTATGATAAATTAAGATATCAAAAATGGATAACTGGTCAGTTTGCTTTTCAG ATATTTAAAGCAATTGAAAATTTAAGAGAAGATATAAATTTTATACCAAAAAATATACCA TTATTATTTGTTCATTCAAAAGATGATTCTGTATGTTCCTTTGAAGGGGCTATGGAATTT TACAATGATCTTGATATGAATAATAAAGAATTTTATCCTCTAGATATTATGGAACATATG TTACCTATGGAACCTGGAAATGAACAAGTGTTAGGGAAAATCTTAGACTGGATATCTAAT TTGAATAATAACGATAACACCAGTGAATACAATACAATTGGTGATGTCACAAAAGTAGAA GAATATATTGAATAA
  • Download Fasta

  • Fasta :-

    MVSNELNCEPYKRNNTKLDGTTSINSFYNRDGLLLRTYSWIVKGAIGIFVLVHGLNSHIR FEFLRHNADIVSNDKVIIKDLDDYYIYKDSWIEKLNEKGYSVYGLDLQGHGESEGWENLR TNVKDFDDLVYDFIQYINIINDSVQSENEDNNSSLNMIENCTGDIGVYEHNTKESHLFEN VKDVNGVSECDTIQVHSCENSVTKNNKHCPVPIYIMGLSMGGNIVLRALELLEKEIHPKK YMNIKGCISLSGMIMLEKLSSVNSIKFKGVYDIMKFVGNHFPKNRLFKRFKFSKHPYIND LIYYDKLRYQKWITGQFAFQIFKAIENLREDINFIPKNIPLLFVHSKDDSVCSFEGAMEF YNDLDMNNKEFYPLDIMEHMLPMEPGNEQVLGKILDWISNLNNNDNTSEYNTIGDVTKVE EYIE

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0702200188 SVNGVSECDT0.991unspPF3D7_0702200197 SIQVHSCENS0.991unsp

PF07_0005      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India