PF3D7_0718700 | conserved Plasmodium membrane protein, unknown function

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_IDPredictionOTHERSPmTPCS_Position
PF3D7_0718700OTHER0.9608530.0000380.039109
No Results

  • Fasta :-

    >PF3D7_0718700 MLYELKKKRNLLNNFFRKNVLVEKGLNIRYFHFNRSPEEKNDFNFLKKYNFHLFKNDGIY QKKNITYCTNPKGQYKEFVKEKNNHYEKKEKVSDVLNYPESKSFPYASISIIIGMIGISG LLKFLIYNLKNCDNEKSIRLQVDKIIHHLDKYFILHNTEKRKGMDINNKIFNIKYITCAF YINENILQCSIQLLTFFLSSCFLEKYYGPIKYISLFLCGSIFSNLISLQFFKFLKQVESL RMVDFVLIHPSGSMAFICALCSLYFKKWAIWKNIPIHCSVLMVPYLISTFYGISSLYKIK KHNTINANKVTNDELKNYQKEMLQNNKGVLNNKSDHNDMINNINDNINIHNNTQEINKNP INMKDCRMVDTNNTLNTLKNYLIINACDSVIQKRKRENVFFNKKLQNLKKEAQECINEIN DKSEKMFFALSSAFTDMFGILLATAACCFMKCVKYIK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0718700.fa Sequence name : PF3D7_0718700 Sequence length : 457 VALUES OF COMPUTED PARAMETERS Coef20 : 4.081 CoefTot : -1.507 ChDiff : 28 ZoneTo : 37 KR : 9 DE : 2 CleavSite : 19 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.959 2.141 0.433 0.798 MesoH : 0.486 0.995 -0.065 0.404 MuHd_075 : 58.243 38.207 16.981 12.338 MuHd_095 : 30.221 21.139 8.319 7.410 MuHd_100 : 34.864 25.736 9.650 8.245 MuHd_105 : 37.868 26.813 10.811 8.428 Hmax_075 : 19.367 21.800 3.706 7.280 Hmax_095 : 2.000 5.688 -2.163 4.180 Hmax_100 : -0.600 8.700 -2.305 4.180 Hmax_105 : 12.600 14.583 0.972 5.740 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1953 0.8047 DFMC : 0.4965 0.5035 This protein is probably imported in mitochondria. f(Ser) = 0.0270 f(Arg) = 0.1081 CMi = 0.12210 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 457 PF3D7_0718700 MLYELKKKRNLLNNFFRKNVLVEKGLNIRYFHFNRSPEEKNDFNFLKKYNFHLFKNDGIYQKKNITYCTNPKGQYKEFVK 80 EKNNHYEKKEKVSDVLNYPESKSFPYASISIIIGMIGISGLLKFLIYNLKNCDNEKSIRLQVDKIIHHLDKYFILHNTEK 160 RKGMDINNKIFNIKYITCAFYINENILQCSIQLLTFFLSSCFLEKYYGPIKYISLFLCGSIFSNLISLQFFKFLKQVESL 240 RMVDFVLIHPSGSMAFICALCSLYFKKWAIWKNIPIHCSVLMVPYLISTFYGISSLYKIKKHNTINANKVTNDELKNYQK 320 EMLQNNKGVLNNKSDHNDMINNINDNINIHNNTQEINKNPINMKDCRMVDTNNTLNTLKNYLIINACDSVIQKRKRENVF 400 FNKKLQNLKKEAQECINEINDKSEKMFFALSSAFTDMFGILLATAACCFMKCVKYIK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0718700 6 -MLYELK|KK 0.057 . PF3D7_0718700 7 MLYELKK|KR 0.074 . PF3D7_0718700 8 LYELKKK|RN 0.070 . PF3D7_0718700 9 YELKKKR|NL 0.148 . PF3D7_0718700 17 LLNNFFR|KN 0.110 . PF3D7_0718700 18 LNNFFRK|NV 0.124 . PF3D7_0718700 24 KNVLVEK|GL 0.069 . PF3D7_0718700 29 EKGLNIR|YF 0.084 . PF3D7_0718700 35 RYFHFNR|SP 0.131 . PF3D7_0718700 40 NRSPEEK|ND 0.078 . PF3D7_0718700 47 NDFNFLK|KY 0.068 . PF3D7_0718700 48 DFNFLKK|YN 0.111 . PF3D7_0718700 55 YNFHLFK|ND 0.069 . PF3D7_0718700 62 NDGIYQK|KN 0.060 . PF3D7_0718700 63 DGIYQKK|NI 0.092 . PF3D7_0718700 72 TYCTNPK|GQ 0.067 . PF3D7_0718700 76 NPKGQYK|EF 0.070 . PF3D7_0718700 80 QYKEFVK|EK 0.058 . PF3D7_0718700 82 KEFVKEK|NN 0.071 . PF3D7_0718700 88 KNNHYEK|KE 0.059 . PF3D7_0718700 89 NNHYEKK|EK 0.103 . PF3D7_0718700 91 HYEKKEK|VS 0.061 . PF3D7_0718700 102 LNYPESK|SF 0.071 . PF3D7_0718700 123 GISGLLK|FL 0.075 . PF3D7_0718700 130 FLIYNLK|NC 0.057 . PF3D7_0718700 136 KNCDNEK|SI 0.085 . PF3D7_0718700 139 DNEKSIR|LQ 0.084 . PF3D7_0718700 144 IRLQVDK|II 0.073 . PF3D7_0718700 151 IIHHLDK|YF 0.069 . PF3D7_0718700 160 ILHNTEK|RK 0.069 . PF3D7_0718700 161 LHNTEKR|KG 0.177 . PF3D7_0718700 162 HNTEKRK|GM 0.104 . PF3D7_0718700 169 GMDINNK|IF 0.062 . PF3D7_0718700 174 NKIFNIK|YI 0.073 . PF3D7_0718700 205 SSCFLEK|YY 0.082 . PF3D7_0718700 211 KYYGPIK|YI 0.071 . PF3D7_0718700 232 ISLQFFK|FL 0.082 . PF3D7_0718700 235 QFFKFLK|QV 0.080 . PF3D7_0718700 241 KQVESLR|MV 0.142 . PF3D7_0718700 266 LCSLYFK|KW 0.061 . PF3D7_0718700 267 CSLYFKK|WA 0.118 . PF3D7_0718700 272 KKWAIWK|NI 0.063 . PF3D7_0718700 298 GISSLYK|IK 0.065 . PF3D7_0718700 300 SSLYKIK|KH 0.066 . PF3D7_0718700 301 SLYKIKK|HN 0.111 . PF3D7_0718700 309 NTINANK|VT 0.066 . PF3D7_0718700 316 VTNDELK|NY 0.069 . PF3D7_0718700 320 ELKNYQK|EM 0.060 . PF3D7_0718700 327 EMLQNNK|GV 0.065 . PF3D7_0718700 333 KGVLNNK|SD 0.070 . PF3D7_0718700 358 NTQEINK|NP 0.057 . PF3D7_0718700 364 KNPINMK|DC 0.072 . PF3D7_0718700 367 INMKDCR|MV 0.207 . PF3D7_0718700 379 NTLNTLK|NY 0.055 . PF3D7_0718700 393 CDSVIQK|RK 0.062 . PF3D7_0718700 394 DSVIQKR|KR 0.192 . PF3D7_0718700 395 SVIQKRK|RE 0.074 . PF3D7_0718700 396 VIQKRKR|EN 0.131 . PF3D7_0718700 403 ENVFFNK|KL 0.062 . PF3D7_0718700 404 NVFFNKK|LQ 0.069 . PF3D7_0718700 409 KKLQNLK|KE 0.055 . PF3D7_0718700 410 KLQNLKK|EA 0.144 . PF3D7_0718700 422 INEINDK|SE 0.070 . PF3D7_0718700 425 INDKSEK|MF 0.065 . PF3D7_0718700 451 AACCFMK|CV 0.083 . PF3D7_0718700 454 CFMKCVK|YI 0.067 . PF3D7_0718700 457 KCVKYIK|-- 0.065 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0718700 ATGTTATATGAGTTAAAAAAAAAGAGAAATCTTCTGAATAATTTTTTTCGTAAAAATGTT TTAGTTGAAAAAGGTTTGAATATAAGATATTTTCATTTCAATAGGAGTCCAGAAGAAAAA AATGATTTTAATTTTTTGAAAAAATATAATTTTCATTTATTTAAAAATGATGGCATTTAC CAAAAAAAAAATATAACGTACTGTACGAATCCTAAAGGACAATATAAAGAATTTGTAAAA GAGAAGAATAATCATTATGAAAAGAAAGAAAAAGTATCAGATGTTCTTAATTACCCAGAA AGTAAATCATTTCCATATGCATCTATTTCTATTATTATAGGTATGATAGGTATATCAGGA TTATTAAAATTTTTAATATATAATTTAAAAAATTGTGATAATGAAAAGAGTATTAGATTA CAGGTAGATAAAATAATACATCATTTAGATAAATATTTTATTTTACATAATACTGAAAAA CGAAAAGGAATGGATATAAATAATAAAATTTTTAATATAAAATATATAACATGTGCATTT TATATCAATGAAAATATATTGCAGTGTTCAATTCAATTATTGACTTTTTTTTTATCTTCA TGTTTTCTTGAAAAATATTATGGACCTATAAAATATATTTCTTTATTTTTATGTGGATCT ATATTTTCTAATCTGATAAGTTTACAGTTCTTTAAATTTTTAAAACAAGTTGAATCTTTA AGGATGGTTGATTTTGTACTTATACATCCATCAGGGTCTATGGCTTTTATATGTGCTTTG TGTTCTTTATATTTTAAGAAATGGGCTATTTGGAAAAATATACCTATACACTGTTCTGTT TTAATGGTACCATATTTAATTTCTACCTTTTACGGAATATCATCGTTATATAAAATTAAA AAACACAATACAATCAATGCAAATAAAGTAACAAATGATGAATTAAAGAATTATCAAAAA GAAATGTTACAAAATAATAAAGGTGTTTTAAACAATAAATCAGACCATAACGATATGATA AATAATATTAATGATAATATAAATATACATAATAATACACAAGAGATAAATAAGAATCCT ATAAATATGAAAGACTGTCGAATGGTTGATACAAACAATACCTTAAATACATTAAAAAAT TATTTAATTATTAATGCGTGTGATTCTGTTATACAGAAGAGGAAAAGGGAAAATGTGTTT TTTAATAAAAAATTACAAAATTTAAAGAAAGAAGCACAAGAATGTATTAACGAAATAAAT GATAAGTCAGAAAAAATGTTTTTTGCTCTTTCATCTGCCTTTACTGATATGTTTGGTATA CTTCTAGCCACAGCAGCTTGCTGTTTTATGAAATGTGTTAAATATATAAAATGA
  • Download Fasta

  • Fasta :-

    MLYELKKKRNLLNNFFRKNVLVEKGLNIRYFHFNRSPEEKNDFNFLKKYNFHLFKNDGIY QKKNITYCTNPKGQYKEFVKEKNNHYEKKEKVSDVLNYPESKSFPYASISIIIGMIGISG LLKFLIYNLKNCDNEKSIRLQVDKIIHHLDKYFILHNTEKRKGMDINNKIFNIKYITCAF YINENILQCSIQLLTFFLSSCFLEKYYGPIKYISLFLCGSIFSNLISLQFFKFLKQVESL RMVDFVLIHPSGSMAFICALCSLYFKKWAIWKNIPIHCSVLMVPYLISTFYGISSLYKIK KHNTINANKVTNDELKNYQKEMLQNNKGVLNNKSDHNDMINNINDNINIHNNTQEINKNP INMKDCRMVDTNNTLNTLKNYLIINACDSVIQKRKRENVFFNKKLQNLKKEAQECINEIN DKSEKMFFALSSAFTDMFGILLATAACCFMKCVKYIK

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PF3D7_071870036 SHFNRSPEEK0.992unsp

PF07_0075      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India