PF3D7_0804400 | methionine aminopeptidase 1c, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0804400SP0.0107830.9891270.000090CS pos: 18-19. ICA-IH. Pr: 0.5927
No Results

  • Fasta :-

    >PF3D7_0804400 MNISIFFFLFLYSGSICAIHLWRHSEWRGRNVLGGGKCRNNDNMLWLDLIKKNKKVNKKK NKNNNNNIISSSCCCCCCCCIYNDKYCFLFVNKKIDNNYKRIKKKEKHNCKKRLKSLNNE GGFSNTYHNDVKKNTLDYCEERLPSYHRYIDNLKTRKIIHPSIRIRNLDKKFMKCKESYN KLYSHLKENDLFENFSYVGRQKKGILSPTYRLPKYIERPNYHKTGIPIYVPYDKEKKNNK TNSDHNNKYDHYNCNYDYNYYDNIKSDKDIQIIKENCKFARELMDDVSYIICEGITTNDI DIYILNKCINNGFYPSPLNYHNFPKSSCISINEILCHGIPDNNLLYLNDVVKIDISLFRN GYHADMCESFIVPKLSKNEKKKRKKFYDFIYLNNSFKTKYTKYILKYHYDLTKNKVVRRG KSFVTKKIKYAAPNSKEQNDDLCNNDFDDNTTNVMNTSQKYCFNDIYEDKIPSHTNMHTN MHTNTQTHTNMHTHTHNRNNSYYPNNQMHNNEKNTFNMSNNVLQQEDDELEYFHKYYDQK IIFNKENNEIYEDIQKFIYQKSLNKTIGKKRFDFFDNTKMSTNDIKNFMYQKNLDLIKTA YECTMAGISVCKDGTPFNKIAEAMDNYIKQVNKKNNKTYSIVPHLCGHNIGKNFHEEPYI IHTLNNDQRKMCSNMVFTIEPIISESSTNFILWPDNWTISNTKYHFSAQFEHTILIQKNG AQILTDKRDISPKYLWQQIN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0804400.fa Sequence name : PF3D7_0804400 Sequence length : 740 VALUES OF COMPUTED PARAMETERS Coef20 : 4.447 CoefTot : -1.150 ChDiff : 35 ZoneTo : 41 KR : 5 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.265 2.176 0.744 0.806 MesoH : -0.788 0.174 -0.389 0.213 MuHd_075 : 20.982 14.881 5.763 5.895 MuHd_095 : 26.051 18.016 8.992 5.319 MuHd_100 : 32.370 19.504 9.971 6.637 MuHd_105 : 32.200 17.400 10.513 6.299 Hmax_075 : 8.050 1.400 -2.554 4.401 Hmax_095 : 13.387 12.250 2.805 4.655 Hmax_100 : 12.700 9.300 1.293 4.890 Hmax_105 : 9.450 3.267 0.242 3.768 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6440 0.3560 DFMC : 0.8380 0.1620
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 740 PF3D7_0804400 MNISIFFFLFLYSGSICAIHLWRHSEWRGRNVLGGGKCRNNDNMLWLDLIKKNKKVNKKKNKNNNNNIISSSCCCCCCCC 80 IYNDKYCFLFVNKKIDNNYKRIKKKEKHNCKKRLKSLNNEGGFSNTYHNDVKKNTLDYCEERLPSYHRYIDNLKTRKIIH 160 PSIRIRNLDKKFMKCKESYNKLYSHLKENDLFENFSYVGRQKKGILSPTYRLPKYIERPNYHKTGIPIYVPYDKEKKNNK 240 TNSDHNNKYDHYNCNYDYNYYDNIKSDKDIQIIKENCKFARELMDDVSYIICEGITTNDIDIYILNKCINNGFYPSPLNY 320 HNFPKSSCISINEILCHGIPDNNLLYLNDVVKIDISLFRNGYHADMCESFIVPKLSKNEKKKRKKFYDFIYLNNSFKTKY 400 TKYILKYHYDLTKNKVVRRGKSFVTKKIKYAAPNSKEQNDDLCNNDFDDNTTNVMNTSQKYCFNDIYEDKIPSHTNMHTN 480 MHTNTQTHTNMHTHTHNRNNSYYPNNQMHNNEKNTFNMSNNVLQQEDDELEYFHKYYDQKIIFNKENNEIYEDIQKFIYQ 560 KSLNKTIGKKRFDFFDNTKMSTNDIKNFMYQKNLDLIKTAYECTMAGISVCKDGTPFNKIAEAMDNYIKQVNKKNNKTYS 640 IVPHLCGHNIGKNFHEEPYIIHTLNNDQRKMCSNMVFTIEPIISESSTNFILWPDNWTISNTKYHFSAQFEHTILIQKNG 720 AQILTDKRDISPKYLWQQIN 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0804400 23 CAIHLWR|HS 0.108 . PF3D7_0804400 28 WRHSEWR|GR 0.123 . PF3D7_0804400 30 HSEWRGR|NV 0.158 . PF3D7_0804400 37 NVLGGGK|CR 0.051 . PF3D7_0804400 39 LGGGKCR|NN 0.098 . PF3D7_0804400 51 LWLDLIK|KN 0.057 . PF3D7_0804400 52 WLDLIKK|NK 0.067 . PF3D7_0804400 54 DLIKKNK|KV 0.082 . PF3D7_0804400 55 LIKKNKK|VN 0.087 . PF3D7_0804400 58 KNKKVNK|KK 0.075 . PF3D7_0804400 59 NKKVNKK|KN 0.096 . PF3D7_0804400 60 KKVNKKK|NK 0.115 . PF3D7_0804400 62 VNKKKNK|NN 0.072 . PF3D7_0804400 85 CCIYNDK|YC 0.059 . PF3D7_0804400 93 CFLFVNK|KI 0.060 . PF3D7_0804400 94 FLFVNKK|ID 0.075 . PF3D7_0804400 100 KIDNNYK|RI 0.072 . PF3D7_0804400 101 IDNNYKR|IK 0.231 . PF3D7_0804400 103 NNYKRIK|KK 0.069 . PF3D7_0804400 104 NYKRIKK|KE 0.155 . PF3D7_0804400 105 YKRIKKK|EK 0.129 . PF3D7_0804400 107 RIKKKEK|HN 0.080 . PF3D7_0804400 111 KEKHNCK|KR 0.063 . PF3D7_0804400 112 EKHNCKK|RL 0.094 . PF3D7_0804400 113 KHNCKKR|LK 0.210 . PF3D7_0804400 115 NCKKRLK|SL 0.083 . PF3D7_0804400 132 TYHNDVK|KN 0.060 . PF3D7_0804400 133 YHNDVKK|NT 0.106 . PF3D7_0804400 142 LDYCEER|LP 0.078 . PF3D7_0804400 148 RLPSYHR|YI 0.096 . PF3D7_0804400 154 RYIDNLK|TR 0.056 . PF3D7_0804400 156 IDNLKTR|KI 0.092 . PF3D7_0804400 157 DNLKTRK|II 0.096 . PF3D7_0804400 164 IIHPSIR|IR 0.080 . PF3D7_0804400 166 HPSIRIR|NL 0.174 . PF3D7_0804400 170 RIRNLDK|KF 0.066 . PF3D7_0804400 171 IRNLDKK|FM 0.147 . PF3D7_0804400 174 LDKKFMK|CK 0.072 . PF3D7_0804400 176 KKFMKCK|ES 0.076 . PF3D7_0804400 181 CKESYNK|LY 0.059 . PF3D7_0804400 187 KLYSHLK|EN 0.065 . PF3D7_0804400 200 NFSYVGR|QK 0.107 . PF3D7_0804400 202 SYVGRQK|KG 0.057 . PF3D7_0804400 203 YVGRQKK|GI 0.244 . PF3D7_0804400 211 ILSPTYR|LP 0.096 . PF3D7_0804400 214 PTYRLPK|YI 0.135 . PF3D7_0804400 218 LPKYIER|PN 0.090 . PF3D7_0804400 223 ERPNYHK|TG 0.060 . PF3D7_0804400 234 IYVPYDK|EK 0.057 . PF3D7_0804400 236 VPYDKEK|KN 0.072 . PF3D7_0804400 237 PYDKEKK|NN 0.077 . PF3D7_0804400 240 KEKKNNK|TN 0.068 . PF3D7_0804400 248 NSDHNNK|YD 0.060 . PF3D7_0804400 265 NYYDNIK|SD 0.075 . PF3D7_0804400 268 DNIKSDK|DI 0.081 . PF3D7_0804400 274 KDIQIIK|EN 0.060 . PF3D7_0804400 278 IIKENCK|FA 0.075 . PF3D7_0804400 281 ENCKFAR|EL 0.131 . PF3D7_0804400 307 DIYILNK|CI 0.062 . PF3D7_0804400 325 NYHNFPK|SS 0.117 . PF3D7_0804400 352 YLNDVVK|ID 0.064 . PF3D7_0804400 359 IDISLFR|NG 0.091 . PF3D7_0804400 374 ESFIVPK|LS 0.060 . PF3D7_0804400 377 IVPKLSK|NE 0.057 . PF3D7_0804400 380 KLSKNEK|KK 0.076 . PF3D7_0804400 381 LSKNEKK|KR 0.105 . PF3D7_0804400 382 SKNEKKK|RK 0.113 . PF3D7_0804400 383 KNEKKKR|KK 0.183 . PF3D7_0804400 384 NEKKKRK|KF 0.096 . PF3D7_0804400 385 EKKKRKK|FY 0.136 . PF3D7_0804400 397 YLNNSFK|TK 0.069 . PF3D7_0804400 399 NNSFKTK|YT 0.105 . PF3D7_0804400 402 FKTKYTK|YI 0.066 . PF3D7_0804400 406 YTKYILK|YH 0.062 . PF3D7_0804400 413 YHYDLTK|NK 0.056 . PF3D7_0804400 415 YDLTKNK|VV 0.071 . PF3D7_0804400 418 TKNKVVR|RG 0.089 . PF3D7_0804400 419 KNKVVRR|GK 0.221 . PF3D7_0804400 421 KVVRRGK|SF 0.171 . PF3D7_0804400 426 GKSFVTK|KI 0.089 . PF3D7_0804400 427 KSFVTKK|IK 0.122 . PF3D7_0804400 429 FVTKKIK|YA 0.069 . PF3D7_0804400 436 YAAPNSK|EQ 0.065 . PF3D7_0804400 460 VMNTSQK|YC 0.067 . PF3D7_0804400 470 NDIYEDK|IP 0.066 . PF3D7_0804400 498 HTHTHNR|NN 0.117 . PF3D7_0804400 513 QMHNNEK|NT 0.067 . PF3D7_0804400 535 ELEYFHK|YY 0.076 . PF3D7_0804400 540 HKYYDQK|II 0.085 . PF3D7_0804400 545 QKIIFNK|EN 0.070 . PF3D7_0804400 556 IYEDIQK|FI 0.063 . PF3D7_0804400 561 QKFIYQK|SL 0.081 . PF3D7_0804400 565 YQKSLNK|TI 0.074 . PF3D7_0804400 569 LNKTIGK|KR 0.065 . PF3D7_0804400 570 NKTIGKK|RF 0.078 . PF3D7_0804400 571 KTIGKKR|FD 0.162 . PF3D7_0804400 579 DFFDNTK|MS 0.059 . PF3D7_0804400 586 MSTNDIK|NF 0.061 . PF3D7_0804400 592 KNFMYQK|NL 0.063 . PF3D7_0804400 598 KNLDLIK|TA 0.066 . PF3D7_0804400 612 AGISVCK|DG 0.069 . PF3D7_0804400 619 DGTPFNK|IA 0.073 . PF3D7_0804400 629 AMDNYIK|QV 0.070 . PF3D7_0804400 633 YIKQVNK|KN 0.062 . PF3D7_0804400 634 IKQVNKK|NN 0.100 . PF3D7_0804400 637 VNKKNNK|TY 0.070 . PF3D7_0804400 652 CGHNIGK|NF 0.069 . PF3D7_0804400 669 TLNNDQR|KM 0.092 . PF3D7_0804400 670 LNNDQRK|MC 0.145 . PF3D7_0804400 703 WTISNTK|YH 0.066 . PF3D7_0804400 718 HTILIQK|NG 0.060 . PF3D7_0804400 727 AQILTDK|RD 0.054 . PF3D7_0804400 728 QILTDKR|DI 0.234 . PF3D7_0804400 733 KRDISPK|YL 0.104 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0804400 ATGAATATCTCTATTTTTTTTTTTTTGTTTTTGTATAGTGGTAGTATATGTGCTATTCAT TTATGGAGACATTCGGAATGGAGAGGACGGAATGTGTTAGGTGGTGGGAAATGTAGGAAT AATGATAATATGTTATGGTTAGATTTAATAAAAAAAAATAAAAAAGTAAATAAAAAAAAA AATAAAAATAATAATAATAATATTATTAGTAGTAGTTGTTGTTGTTGTTGTTGTTGTTGT ATATATAATGATAAGTACTGTTTCCTTTTTGTGAATAAGAAGATAGATAATAATTATAAG AGGATAAAAAAGAAAGAGAAGCATAATTGTAAGAAAAGATTAAAGAGTTTAAATAACGAA GGTGGTTTTTCTAATACATATCATAATGATGTAAAAAAAAATACATTAGATTATTGTGAA GAAAGATTACCATCATATCATAGATATATAGATAATTTAAAAACTCGTAAAATTATTCAT CCAAGTATAAGAATCCGAAATTTAGATAAGAAGTTTATGAAATGTAAAGAAAGTTATAAT AAATTATATTCTCATTTAAAAGAAAATGATTTGTTTGAAAATTTTTCATATGTTGGTAGA CAAAAAAAAGGAATATTATCTCCTACATATCGTTTACCTAAATATATTGAGAGACCTAAT TATCATAAGACAGGTATTCCAATATATGTACCATATGATAAGGAAAAAAAAAATAATAAA ACCAATAGTGATCATAATAATAAATATGATCATTACAATTGTAATTATGATTACAATTAT TATGATAATATAAAGAGTGATAAAGATATCCAAATTATTAAAGAAAATTGTAAATTTGCT AGAGAACTAATGGATGATGTATCTTATATAATATGTGAAGGGATAACAACAAATGACATA GATATATATATTTTAAACAAATGTATTAATAATGGATTTTATCCATCACCTTTAAATTAT CATAATTTTCCAAAAAGTTCTTGTATTTCCATTAACGAAATTTTATGTCATGGTATACCA GATAATAATTTACTATATTTAAACGATGTTGTTAAAATAGATATTAGTTTATTTAGGAAT GGATATCATGCAGATATGTGTGAGAGTTTTATTGTACCCAAATTAAGTAAAAACGAAAAA AAAAAAAGAAAAAAATTTTATGATTTTATTTATTTAAATAATTCATTCAAAACAAAATAT ACCAAATATATTTTAAAATATCATTATGATTTAACAAAAAATAAAGTTGTCAGAAGAGGA AAATCATTTGTCACAAAAAAAATTAAATATGCTGCTCCAAACTCAAAAGAACAAAATGAT GATCTATGTAATAACGACTTTGATGATAACACAACAAATGTAATGAACACATCTCAAAAA TATTGTTTTAATGATATCTATGAAGATAAAATACCATCACATACAAATATGCATACAAAT ATGCATACAAATACACAGACCCATACAAATATGCATACCCATACCCATAATAGGAACAAT TCTTATTATCCAAATAATCAAATGCACAATAATGAAAAGAATACATTTAATATGTCGAAT AATGTTTTGCAACAAGAAGACGATGAGCTTGAATATTTCCATAAATATTATGACCAAAAA ATCATTTTTAATAAAGAAAATAATGAAATTTATGAAGACATCCAGAAATTTATATATCAA AAAAGTTTAAATAAAACAATTGGAAAAAAAAGATTCGATTTTTTCGATAATACAAAAATG AGTACAAATGATATCAAAAATTTCATGTATCAAAAAAATTTGGATTTAATAAAAACAGCA TATGAATGTACAATGGCAGGAATTAGTGTATGTAAAGATGGAACACCTTTTAACAAAATA GCAGAAGCTATGGATAATTATATTAAACAAGTAAATAAAAAAAATAATAAAACATATTCT ATAGTACCACATTTATGTGGTCATAATATAGGAAAAAATTTTCATGAAGAACCATATATT ATACATACATTAAATAATGATCAAAGAAAAATGTGTTCAAATATGGTATTTACAATAGAA CCAATCATATCAGAATCTTCTACCAATTTTATTCTTTGGCCAGATAACTGGACTATCTCA AATACAAAATATCATTTTTCTGCTCAATTCGAACATACTATTTTAATACAAAAAAACGGA GCACAAATTCTAACAGACAAAAGAGATATATCTCCAAAATATTTGTGGCAGCAAATAAAT TAA
  • Download Fasta

  • Fasta :-

    MNISIFFFLFLYSGSICAIHLWRHSEWRGRNVLGGGKCRNNDNMLWLDLIKKNKKVNKKK NKNNNNNIISSSCCCCCCCCIYNDKYCFLFVNKKIDNNYKRIKKKEKHNCKKRLKSLNNE GGFSNTYHNDVKKNTLDYCEERLPSYHRYIDNLKTRKIIHPSIRIRNLDKKFMKCKESYN KLYSHLKENDLFENFSYVGRQKKGILSPTYRLPKYIERPNYHKTGIPIYVPYDKEKKNNK TNSDHNNKYDHYNCNYDYNYYDNIKSDKDIQIIKENCKFARELMDDVSYIICEGITTNDI DIYILNKCINNGFYPSPLNYHNFPKSSCISINEILCHGIPDNNLLYLNDVVKIDISLFRN GYHADMCESFIVPKLSKNEKKKRKKFYDFIYLNNSFKTKYTKYILKYHYDLTKNKVVRRG KSFVTKKIKYAAPNSKEQNDDLCNNDFDDNTTNVMNTSQKYCFNDIYEDKIPSHTNMHTN MHTNTQTHTNMHTHTHNRNNSYYPNNQMHNNEKNTFNMSNNVLQQEDDELEYFHKYYDQK IIFNKENNEIYEDIQKFIYQKSLNKTIGKKRFDFFDNTKMSTNDIKNFMYQKNLDLIKTA YECTMAGISVCKDGTPFNKIAEAMDNYIKQVNKKNNKTYSIVPHLCGHNIGKNFHEEPYI IHTLNNDQRKMCSNMVFTIEPIISESSTNFILWPDNWTISNTKYHFSAQFEHTILIQKNG AQILTDKRDISPKYLWQQIN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0804400581 SNTKMSTNDI0.995unspPF3D7_0804400731 SKRDISPKYL0.995unsp

MAL8P1.140      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India