PF3D7_0807800 | 26S proteasome regulatory subunit RPN10, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005634      

  • Curated_GO_Components:  nucleus      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0807800OTHER0.9999830.0000160.000001
No Results

  • Fasta :-

    >PF3D7_0807800 MSNIEATIICIDNSDYNRNEDIVPNRFLSQIDCVNVLCCNKTSLHYKNNIGILMMAGDKI KVKVSLTNDIGQLLSCIHDIKLDGTCDIIRSLLIAQLALKHRVDKNLDQKIILFIGSPFH VNEKQLINTGKQLKKNNISVDIISFGNIDKNRDKLMMLFESVNNNDNCRFIECPEYENNL SKFVLNSFLNNNDFNIGNIQDDDQLLNAMQLSLEESQHMDKNLNTTNNINTGSNHHTNNI TTNNNDLPTIEEIENMKDIDNELKEALILSLREYTEKNKLENKDTTSNNNNNNNESNNNN NESNNNNNESNNNNNESNNNNNESNNNNNESNNNNNESNNNNNGNTCGNNNNNSLNFYKK DDNFALVNESYKNNFDKNDENKLETSKEKKENESYEKVFKIDKEENMEDTSKDIINEHIY KDIQHNDENNNVINQGEEKEQSASSLIQDPSYISNILGKINPNVNVFDKKEGDSDKEKNK E
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0807800.fa Sequence name : PF3D7_0807800 Sequence length : 481 VALUES OF COMPUTED PARAMETERS Coef20 : 3.708 CoefTot : -0.022 ChDiff : -30 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.088 1.076 -0.070 0.438 MesoH : -0.832 0.482 -0.360 0.175 MuHd_075 : 15.731 11.472 5.891 3.380 MuHd_095 : 3.666 8.970 1.396 4.446 MuHd_100 : 4.412 8.504 1.423 2.931 MuHd_105 : 15.809 7.890 3.656 0.582 Hmax_075 : -4.200 5.483 -1.302 1.528 Hmax_095 : -5.400 7.100 -1.762 3.460 Hmax_100 : -3.000 6.700 -1.191 2.300 Hmax_105 : 2.200 9.400 0.098 2.110 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9449 0.0551 DFMC : 0.9586 0.0414
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 481 PF3D7_0807800 MSNIEATIICIDNSDYNRNEDIVPNRFLSQIDCVNVLCCNKTSLHYKNNIGILMMAGDKIKVKVSLTNDIGQLLSCIHDI 80 KLDGTCDIIRSLLIAQLALKHRVDKNLDQKIILFIGSPFHVNEKQLINTGKQLKKNNISVDIISFGNIDKNRDKLMMLFE 160 SVNNNDNCRFIECPEYENNLSKFVLNSFLNNNDFNIGNIQDDDQLLNAMQLSLEESQHMDKNLNTTNNINTGSNHHTNNI 240 TTNNNDLPTIEEIENMKDIDNELKEALILSLREYTEKNKLENKDTTSNNNNNNNESNNNNNESNNNNNESNNNNNESNNN 320 NNESNNNNNESNNNNNESNNNNNGNTCGNNNNNSLNFYKKDDNFALVNESYKNNFDKNDENKLETSKEKKENESYEKVFK 400 IDKEENMEDTSKDIINEHIYKDIQHNDENNNVINQGEEKEQSASSLIQDPSYISNILGKINPNVNVFDKKEGDSDKEKNK 480 E 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 . 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0807800 18 DNSDYNR|NE 0.096 . PF3D7_0807800 26 EDIVPNR|FL 0.136 . PF3D7_0807800 41 NVLCCNK|TS 0.051 . PF3D7_0807800 47 KTSLHYK|NN 0.104 . PF3D7_0807800 59 LMMAGDK|IK 0.055 . PF3D7_0807800 61 MAGDKIK|VK 0.059 . PF3D7_0807800 63 GDKIKVK|VS 0.064 . PF3D7_0807800 81 SCIHDIK|LD 0.064 . PF3D7_0807800 90 GTCDIIR|SL 0.115 . PF3D7_0807800 100 IAQLALK|HR 0.057 . PF3D7_0807800 102 QLALKHR|VD 0.075 . PF3D7_0807800 105 LKHRVDK|NL 0.270 . PF3D7_0807800 110 DKNLDQK|II 0.064 . PF3D7_0807800 124 PFHVNEK|QL 0.068 . PF3D7_0807800 131 QLINTGK|QL 0.076 . PF3D7_0807800 134 NTGKQLK|KN 0.064 . PF3D7_0807800 135 TGKQLKK|NN 0.093 . PF3D7_0807800 150 SFGNIDK|NR 0.061 . PF3D7_0807800 152 GNIDKNR|DK 0.129 . PF3D7_0807800 154 IDKNRDK|LM 0.059 . PF3D7_0807800 169 NNNDNCR|FI 0.126 . PF3D7_0807800 182 YENNLSK|FV 0.085 . PF3D7_0807800 221 ESQHMDK|NL 0.062 . PF3D7_0807800 257 EEIENMK|DI 0.081 . PF3D7_0807800 264 DIDNELK|EA 0.054 . PF3D7_0807800 272 ALILSLR|EY 0.074 . PF3D7_0807800 277 LREYTEK|NK 0.064 . PF3D7_0807800 279 EYTEKNK|LE 0.055 . PF3D7_0807800 283 KNKLENK|DT 0.071 . PF3D7_0807800 359 NSLNFYK|KD 0.060 . PF3D7_0807800 360 SLNFYKK|DD 0.159 . PF3D7_0807800 372 LVNESYK|NN 0.070 . PF3D7_0807800 377 YKNNFDK|ND 0.097 . PF3D7_0807800 382 DKNDENK|LE 0.067 . PF3D7_0807800 387 NKLETSK|EK 0.058 . PF3D7_0807800 389 LETSKEK|KE 0.059 . PF3D7_0807800 390 ETSKEKK|EN 0.151 . PF3D7_0807800 397 ENESYEK|VF 0.053 . PF3D7_0807800 400 SYEKVFK|ID 0.060 . PF3D7_0807800 403 KVFKIDK|EE 0.056 . PF3D7_0807800 412 NMEDTSK|DI 0.069 . PF3D7_0807800 421 INEHIYK|DI 0.076 . PF3D7_0807800 439 INQGEEK|EQ 0.065 . PF3D7_0807800 459 ISNILGK|IN 0.067 . PF3D7_0807800 469 NVNVFDK|KE 0.077 . PF3D7_0807800 470 VNVFDKK|EG 0.080 . PF3D7_0807800 476 KEGDSDK|EK 0.068 . PF3D7_0807800 478 GDSDKEK|NK 0.079 . PF3D7_0807800 480 SDKEKNK|E- 0.071 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0807800 ATGAGCAATATCGAAGCTACAATAATATGTATAGATAATAGTGATTATAATAGAAATGAA GATATAGTCCCTAACAGATTTTTATCACAGATCGATTGTGTGAATGTTCTGTGTTGTAAT AAAACGAGCTTACACTACAAAAACAACATAGGCATATTAATGATGGCCGGGGATAAAATA AAAGTGAAGGTGTCTTTAACGAATGATATAGGTCAATTACTTTCTTGTATTCATGATATA AAACTAGATGGTACATGTGATATAATAAGAAGTTTGTTAATAGCCCAGCTAGCTTTAAAG CATAGAGTAGATAAGAATTTAGATCAGAAGATAATATTATTTATAGGTAGTCCGTTTCAT GTTAATGAAAAGCAATTAATAAATACTGGGAAGCAATTAAAAAAGAACAACATATCTGTA GATATAATAAGTTTTGGTAATATAGATAAGAATAGAGATAAATTAATGATGTTATTTGAG AGTGTAAATAATAATGATAATTGTAGATTTATTGAATGTCCAGAATATGAGAATAATTTA AGTAAATTTGTTTTGAATTCATTTTTAAATAATAATGATTTTAATATAGGAAATATTCAA GATGATGATCAGCTACTGAATGCTATGCAATTATCTTTGGAAGAAAGTCAGCATATGGAT AAAAATTTGAATACTACTAATAACATAAACACAGGTAGTAATCATCATACTAATAATATT ACAACTAATAATAATGACTTACCCACCATTGAAGAAATCGAAAATATGAAAGATATAGAT AATGAGTTAAAGGAGGCATTAATATTGTCTTTAAGGGAATATACAGAAAAGAATAAATTA GAAAATAAAGACACAACAAGTAATAATAATAATAATAATAATGAAAGTAATAATAACAAT AATGAAAGCAACAACAATAATAATGAAAGCAACAACAATAATAATGAAAGCAACAACAAT AATAATGAAAGCAACAACAATAATAATGAAAGCAACAACAATAATAATGAAAGCAACAAC AATAATAATGGTAACACGTGTGGTAATAATAATAATAATTCTCTTAATTTTTATAAAAAA GATGACAATTTTGCTCTTGTGAATGAAAGTTATAAAAATAATTTTGATAAAAATGACGAG AATAAATTAGAAACATCCAAGGAGAAAAAAGAAAATGAAAGTTATGAAAAAGTATTTAAA ATTGATAAAGAAGAAAATATGGAAGATACTTCCAAAGATATTATTAATGAACATATTTAT AAGGACATTCAACACAATGATGAAAATAATAATGTAATAAACCAAGGTGAAGAAAAGGAG CAATCGGCATCTTCATTAATACAAGATCCTAGTTATATATCCAACATCTTAGGAAAAATA AATCCAAATGTTAATGTTTTTGATAAAAAGGAGGGAGACAGCGACAAAGAAAAAAATAAA GAATAA 123 3 0.0000 0.0000 0.0000 0.0000
  • Download Fasta

  • Fasta :-

    MSNIEATIICIDNSDYNRNEDIVPNRFLSQIDCVNVLCCNKTSLHYKNNIGILMMAGDKI KVKVSLTNDIGQLLSCIHDIKLDGTCDIIRSLLIAQLALKHRVDKNLDQKIILFIGSPFH VNEKQLINTGKQLKKNNISVDIISFGNIDKNRDKLMMLFESVNNNDNCRFIECPEYENNL SKFVLNSFLNNNDFNIGNIQDDDQLLNAMQLSLEESQHMDKNLNTTNNINTGSNHHTNNI TTNNNDLPTIEEIENMKDIDNELKEALILSLREYTEKNKLENKDTTSNNNNNNNESNNNN NESNNNNNESNNNNNESNNNNNESNNNNNESNNNNNESNNNNNGNTCGNNNNNSLNFYKK DDNFALVNESYKNNFDKNDENKLETSKEKKENESYEKVFKIDKEENMEDTSKDIINEHIY KDIQHNDENNNVINQGEEKEQSASSLIQDPSYISNILGKINPNVNVFDKKEGDSDKEKNK E

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0807800474 SKEGDSDKEK0.996unspPF3D7_0807800474 SKEGDSDKEK0.996unspPF3D7_0807800474 SKEGDSDKEK0.996unspPF3D7_080780029 SNRFLSQIDC0.993unspPF3D7_0807800176 YECPEYENNL0.99unsp

PF08_0109      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India