PF3D7_0816600 | chaperone protein ClpB1

UniProt_ID: Q8IB03

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0005524
Computed_GO_Functions: ATP binding
Computed_GO_Process_IDs: GO:0019538
Computed_GO_Processes: protein metabolic process
Curated_GO_Component_IDs: GO:0020011 GO:0005634
Curated_GO_Components: apicoplast nucleus
Curated_GO_Function_IDs: GO:0016887
Curated_GO_Functions: ATPase activity
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PF3D7_0816600	SP	0.093560	0.906267	0.000173	CS pos: 23-24. TYS-KK. Pr: 0.9419

No Results

Fasta :-
>PF3D7_0816600 MVNSFFFCFVIIGLIYVWDITYSKKAKIFFNKNDIFSIKNTHWDIYDKKKYFFIGNNHLK NEESFLPEVRKDYKSQIKEYKNSTNGIIYHNNKNRLSYTINDQVNYDNNMTSGINKKRKV KDSSIHMNNSYEKNRNKNKFALFMSDEEYTINSDDYTEKAWEAISSLNKIGEKYDSAYVE AEMLLLALLNDSPDGLAERILKESGIDTQLLVQEIDDYLKKQPKMPSGFGEQKILGRTLQ TVLSTSKRLKKEFNDEYISIEHLLLSIISEDSKFTRPWLLKYNVNYEKVKKAVEKIRGKK KVTSKTPEMTYQALEKYSRDLTALARAGKLDPVIGRDNEIRRAIQILSRRTKNNPILLGD PGVGKTAIVEGLAIKIVQGDVPDSLKGRKLVSLDMSSLIAGAKYRGDFEERLKSILKEVQ DAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLARGELRCIGATTVSEYRQFIEKD KALERRFQQILVEQPSVDETISILRGLKERYEVHHGVRILDSALVQAAVLSDRYISYRFL PDKAIDLIDEAASNLKIQLSSKPIQLENIEKQLIQLEMEKISILGDKQKNLFNYSSVANT HNNNNNSSISSNNSSSYGNAEETEATVDYTKSPNFLKKRINEKEIDRLKMIDRIMSELRK EQRKILDSWSTEKSYVDNIRAIKERIDVVKIEIEKAERYFDLNRAAELRFETLPDLEKQL KKAEENYLNDIPEKSRILKDEVTSEDIVNIVSMSTGIRLNKLLKSEKEKILNLENELHKQ IIGQDDAVKVVTKAVQRSRVGMNNPKRPIASLMFLGPTGVGKTELSKVLADVLFDTPEAV IHFDMSEYMEKHSISKLIGAAPGYVGYEQGGLLTDAVRKKPYSIILFDEIEKAHPDVYNL LLRVIDEGKLSDTKGNVANFRNTIIIFTSNLGSQSILDLANDPNKKEKIKEQVMKSVRET FRPEFYNRIDDHVIFDSLSKKELKEIANIEIRKVANRLFDKNFKITIDDAVFSYIVDKAY DPSFGARPLKRVIQSEIETEIAVRILDETFVENDTINISLKDQKLHFSKS
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0816600.fa Sequence name : PF3D7_0816600 Sequence length : 1070 VALUES OF COMPUTED PARAMETERS Coef20 : 4.448 CoefTot : -1.169 ChDiff : 6 ZoneTo : 33 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.129 2.324 0.413 0.858 MesoH : -0.523 0.306 -0.401 0.250 MuHd_075 : 17.929 15.141 5.792 3.967 MuHd_095 : 21.783 11.060 4.655 4.337 MuHd_100 : 15.556 8.529 3.812 3.605 MuHd_105 : 15.153 11.074 4.269 2.652 Hmax_075 : 15.750 22.400 3.720 8.003 Hmax_095 : 6.500 9.800 -1.472 4.979 Hmax_100 : 6.500 18.400 -0.716 4.590 Hmax_105 : 19.500 21.933 -1.333 4.970 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9455 0.0545 DFMC : 0.9498 0.0502

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1070 PF3D7_0816600 MVNSFFFCFVIIGLIYVWDITYSKKAKIFFNKNDIFSIKNTHWDIYDKKKYFFIGNNHLKNEESFLPEVRKDYKSQIKEY 80 KNSTNGIIYHNNKNRLSYTINDQVNYDNNMTSGINKKRKVKDSSIHMNNSYEKNRNKNKFALFMSDEEYTINSDDYTEKA 160 WEAISSLNKIGEKYDSAYVEAEMLLLALLNDSPDGLAERILKESGIDTQLLVQEIDDYLKKQPKMPSGFGEQKILGRTLQ 240 TVLSTSKRLKKEFNDEYISIEHLLLSIISEDSKFTRPWLLKYNVNYEKVKKAVEKIRGKKKVTSKTPEMTYQALEKYSRD 320 LTALARAGKLDPVIGRDNEIRRAIQILSRRTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKLVSLDMSSLIA 400 GAKYRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLARGELRCIGATTVSEYRQFIEKD 480 KALERRFQQILVEQPSVDETISILRGLKERYEVHHGVRILDSALVQAAVLSDRYISYRFLPDKAIDLIDEAASNLKIQLS 560 SKPIQLENIEKQLIQLEMEKISILGDKQKNLFNYSSVANTHNNNNNSSISSNNSSSYGNAEETEATVDYTKSPNFLKKRI 640 NEKEIDRLKMIDRIMSELRKEQRKILDSWSTEKSYVDNIRAIKERIDVVKIEIEKAERYFDLNRAAELRFETLPDLEKQL 720 KKAEENYLNDIPEKSRILKDEVTSEDIVNIVSMSTGIRLNKLLKSEKEKILNLENELHKQIIGQDDAVKVVTKAVQRSRV 800 GMNNPKRPIASLMFLGPTGVGKTELSKVLADVLFDTPEAVIHFDMSEYMEKHSISKLIGAAPGYVGYEQGGLLTDAVRKK 880 PYSIILFDEIEKAHPDVYNLLLRVIDEGKLSDTKGNVANFRNTIIIFTSNLGSQSILDLANDPNKKEKIKEQVMKSVRET 960 FRPEFYNRIDDHVIFDSLSKKELKEIANIEIRKVANRLFDKNFKITIDDAVFSYIVDKAYDPSFGARPLKRVIQSEIETE 1040 IAVRILDETFVENDTINISLKDQKLHFSKS 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 .............................. 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0816600 24 WDITYSK|KA 0.058 . PF3D7_0816600 25 DITYSKK|AK 0.080 . PF3D7_0816600 27 TYSKKAK|IF 0.095 . PF3D7_0816600 32 AKIFFNK|ND 0.068 . PF3D7_0816600 39 NDIFSIK|NT 0.070 . PF3D7_0816600 48 HWDIYDK|KK 0.056 . PF3D7_0816600 49 WDIYDKK|KY 0.107 . PF3D7_0816600 50 DIYDKKK|YF 0.161 . PF3D7_0816600 60 IGNNHLK|NE 0.074 . PF3D7_0816600 70 SFLPEVR|KD 0.077 . PF3D7_0816600 71 FLPEVRK|DY 0.103 . PF3D7_0816600 74 EVRKDYK|SQ 0.083 . PF3D7_0816600 78 DYKSQIK|EY 0.062 . PF3D7_0816600 81 SQIKEYK|NS 0.071 . PF3D7_0816600 93 IIYHNNK|NR 0.054 . PF3D7_0816600 95 YHNNKNR|LS 0.137 . PF3D7_0816600 116 MTSGINK|KR 0.063 . PF3D7_0816600 117 TSGINKK|RK 0.082 . PF3D7_0816600 118 SGINKKR|KV 0.336 . PF3D7_0816600 119 GINKKRK|VK 0.150 . PF3D7_0816600 121 NKKRKVK|DS 0.243 . PF3D7_0816600 133 MNNSYEK|NR 0.064 . PF3D7_0816600 135 NSYEKNR|NK 0.089 . PF3D7_0816600 137 YEKNRNK|NK 0.067 . PF3D7_0816600 139 KNRNKNK|FA 0.079 . PF3D7_0816600 159 SDDYTEK|AW 0.070 . PF3D7_0816600 169 AISSLNK|IG 0.064 . PF3D7_0816600 173 LNKIGEK|YD 0.070 . PF3D7_0816600 199 PDGLAER|IL 0.083 . PF3D7_0816600 202 LAERILK|ES 0.112 . PF3D7_0816600 220 EIDDYLK|KQ 0.053 . PF3D7_0816600 221 IDDYLKK|QP 0.068 . PF3D7_0816600 224 YLKKQPK|MP 0.076 . PF3D7_0816600 233 SGFGEQK|IL 0.078 . PF3D7_0816600 237 EQKILGR|TL 0.103 . PF3D7_0816600 247 TVLSTSK|RL 0.058 . PF3D7_0816600 248 VLSTSKR|LK 0.169 . PF3D7_0816600 250 STSKRLK|KE 0.070 . PF3D7_0816600 251 TSKRLKK|EF 0.358 . PF3D7_0816600 273 IISEDSK|FT 0.074 . PF3D7_0816600 276 EDSKFTR|PW 0.099 . PF3D7_0816600 281 TRPWLLK|YN 0.073 . PF3D7_0816600 288 YNVNYEK|VK 0.062 . PF3D7_0816600 290 VNYEKVK|KA 0.074 . PF3D7_0816600 291 NYEKVKK|AV 0.197 . PF3D7_0816600 295 VKKAVEK|IR 0.083 . PF3D7_0816600 297 KAVEKIR|GK 0.115 . PF3D7_0816600 299 VEKIRGK|KK 0.058 . PF3D7_0816600 300 EKIRGKK|KV 0.416 . PF3D7_0816600 301 KIRGKKK|VT 0.161 . PF3D7_0816600 305 KKKVTSK|TP 0.064 . PF3D7_0816600 316 TYQALEK|YS 0.068 . PF3D7_0816600 319 ALEKYSR|DL 0.101 . PF3D7_0816600 326 DLTALAR|AG 0.068 . PF3D7_0816600 329 ALARAGK|LD 0.107 . PF3D7_0816600 336 LDPVIGR|DN 0.108 . PF3D7_0816600 341 GRDNEIR|RA 0.131 . PF3D7_0816600 342 RDNEIRR|AI 0.140 . PF3D7_0816600 349 AIQILSR|RT 0.071 . PF3D7_0816600 350 IQILSRR|TK 0.093 . PF3D7_0816600 352 ILSRRTK|NN 0.155 . PF3D7_0816600 365 GDPGVGK|TA 0.071 . PF3D7_0816600 375 VEGLAIK|IV 0.068 . PF3D7_0816600 386 DVPDSLK|GR 0.053 . PF3D7_0816600 388 PDSLKGR|KL 0.102 . PF3D7_0816600 389 DSLKGRK|LV 0.089 . PF3D7_0816600 403 SLIAGAK|YR 0.079 . PF3D7_0816600 405 IAGAKYR|GD 0.115 . PF3D7_0816600 411 RGDFEER|LK 0.077 . PF3D7_0816600 413 DFEERLK|SI 0.071 . PF3D7_0816600 417 RLKSILK|EV 0.091 . PF3D7_0816600 454 DAGNILK|PM 0.059 . PF3D7_0816600 459 LKPMLAR|GE 0.089 . PF3D7_0816600 463 LARGELR|CI 0.135 . PF3D7_0816600 474 TTVSEYR|QF 0.086 . PF3D7_0816600 479 YRQFIEK|DK 0.069 . PF3D7_0816600 481 QFIEKDK|AL 0.074 . PF3D7_0816600 485 KDKALER|RF 0.087 . PF3D7_0816600 486 DKALERR|FQ 0.175 . PF3D7_0816600 505 ETISILR|GL 0.071 . PF3D7_0816600 508 SILRGLK|ER 0.092 . PF3D7_0816600 510 LRGLKER|YE 0.102 . PF3D7_0816600 518 EVHHGVR|IL 0.106 . PF3D7_0816600 533 AAVLSDR|YI 0.090 . PF3D7_0816600 538 DRYISYR|FL 0.122 . PF3D7_0816600 543 YRFLPDK|AI 0.076 . PF3D7_0816600 556 EAASNLK|IQ 0.055 . PF3D7_0816600 562 KIQLSSK|PI 0.064 . PF3D7_0816600 571 QLENIEK|QL 0.072 . PF3D7_0816600 580 IQLEMEK|IS 0.058 . PF3D7_0816600 587 ISILGDK|QK 0.062 . PF3D7_0816600 589 ILGDKQK|NL 0.068 . PF3D7_0816600 631 ATVDYTK|SP 0.061 . PF3D7_0816600 637 KSPNFLK|KR 0.058 . PF3D7_0816600 638 SPNFLKK|RI 0.197 . PF3D7_0816600 639 PNFLKKR|IN 0.252 . PF3D7_0816600 643 KKRINEK|EI 0.069 . PF3D7_0816600 647 NEKEIDR|LK 0.071 . PF3D7_0816600 649 KEIDRLK|MI 0.069 . PF3D7_0816600 653 RLKMIDR|IM 0.094 . PF3D7_0816600 659 RIMSELR|KE 0.078 . PF3D7_0816600 660 IMSELRK|EQ 0.101 . PF3D7_0816600 663 ELRKEQR|KI 0.110 . PF3D7_0816600 664 LRKEQRK|IL 0.100 . PF3D7_0816600 673 DSWSTEK|SY 0.079 . PF3D7_0816600 680 SYVDNIR|AI 0.105 . PF3D7_0816600 683 DNIRAIK|ER 0.107 . PF3D7_0816600 685 IRAIKER|ID 0.114 . PF3D7_0816600 690 ERIDVVK|IE 0.067 . PF3D7_0816600 695 VKIEIEK|AE 0.055 . PF3D7_0816600 698 EIEKAER|YF 0.081 . PF3D7_0816600 704 RYFDLNR|AA 0.096 . PF3D7_0816600 709 NRAAELR|FE 0.083 . PF3D7_0816600 718 TLPDLEK|QL 0.066 . PF3D7_0816600 721 DLEKQLK|KA 0.066 . PF3D7_0816600 722 LEKQLKK|AE 0.125 . PF3D7_0816600 734 LNDIPEK|SR 0.069 . PF3D7_0816600 736 DIPEKSR|IL 0.092 . PF3D7_0816600 739 EKSRILK|DE 0.237 . PF3D7_0816600 758 SMSTGIR|LN 0.072 . PF3D7_0816600 761 TGIRLNK|LL 0.100 . PF3D7_0816600 764 RLNKLLK|SE 0.078 . PF3D7_0816600 767 KLLKSEK|EK 0.060 . PF3D7_0816600 769 LKSEKEK|IL 0.074 . PF3D7_0816600 779 LENELHK|QI 0.074 . PF3D7_0816600 789 GQDDAVK|VV 0.070 . PF3D7_0816600 793 AVKVVTK|AV 0.088 . PF3D7_0816600 797 VTKAVQR|SR 0.091 . PF3D7_0816600 799 KAVQRSR|VG 0.073 . PF3D7_0816600 806 VGMNNPK|RP 0.063 . PF3D7_0816600 807 GMNNPKR|PI 0.193 . PF3D7_0816600 822 GPTGVGK|TE 0.059 . PF3D7_0816600 827 GKTELSK|VL 0.067 . PF3D7_0816600 851 MSEYMEK|HS 0.069 . PF3D7_0816600 856 EKHSISK|LI 0.081 . PF3D7_0816600 878 LLTDAVR|KK 0.069 . PF3D7_0816600 879 LTDAVRK|KP 0.069 . PF3D7_0816600 880 TDAVRKK|PY 0.187 . PF3D7_0816600 892 LFDEIEK|AH 0.055 . PF3D7_0816600 903 VYNLLLR|VI 0.090 . PF3D7_0816600 909 RVIDEGK|LS 0.066 . PF3D7_0816600 914 GKLSDTK|GN 0.060 . PF3D7_0816600 921 GNVANFR|NT 0.120 . PF3D7_0816600 945 LANDPNK|KE 0.066 . PF3D7_0816600 946 ANDPNKK|EK 0.106 . PF3D7_0816600 948 DPNKKEK|IK 0.108 . PF3D7_0816600 950 NKKEKIK|EQ 0.061 . PF3D7_0816600 955 IKEQVMK|SV 0.148 . PF3D7_0816600 958 QVMKSVR|ET 0.089 . PF3D7_0816600 962 SVRETFR|PE 0.085 . PF3D7_0816600 968 RPEFYNR|ID 0.128 . PF3D7_0816600 980 IFDSLSK|KE 0.053 . PF3D7_0816600 981 FDSLSKK|EL 0.130 . PF3D7_0816600 984 LSKKELK|EI 0.069 . PF3D7_0816600 992 IANIEIR|KV 0.114 . PF3D7_0816600 993 ANIEIRK|VA 0.080 . PF3D7_0816600 997 IRKVANR|LF 0.122 . PF3D7_0816600 1001 ANRLFDK|NF 0.063 . PF3D7_0816600 1004 LFDKNFK|IT 0.059 . PF3D7_0816600 1018 FSYIVDK|AY 0.077 . PF3D7_0816600 1027 DPSFGAR|PL 0.147 . PF3D7_0816600 1030 FGARPLK|RV 0.244 . PF3D7_0816600 1031 GARPLKR|VI 0.261 . PF3D7_0816600 1044 ETEIAVR|IL 0.079 . PF3D7_0816600 1061 TINISLK|DQ 0.071 . PF3D7_0816600 1064 ISLKDQK|LH 0.057 . PF3D7_0816600 1069 QKLHFSK|S- 0.086 . ____________________________^_________________

Fasta :-
>PF3D7_0816600 ATGGTTAATAGTTTTTTTTTTTGTTTTGTGATAATTGGTCTTATTTATGTATGGGACATC ACGTACAGTAAAAAAGCTAAAATATTTTTTAATAAAAATGATATCTTTAGTATAAAAAAT ACGCACTGGGATATTTATGATAAGAAGAAATATTTTTTTATTGGAAATAATCATTTAAAA AATGAAGAAAGTTTTTTACCAGAAGTAAGAAAGGATTATAAATCACAAATAAAAGAATAT AAGAATTCAACGAATGGTATTATATATCATAATAATAAAAACAGATTAAGTTATACAATA AATGATCAAGTAAATTATGATAATAATATGACAAGTGGTATTAATAAAAAAAGAAAAGTT AAAGATAGTAGTATACACATGAATAATTCTTATGAAAAAAATAGAAACAAAAATAAATTT GCTTTATTTATGAGTGATGAAGAATATACCATTAATTCAGATGATTATACCGAAAAAGCT TGGGAAGCTATTAGCTCCTTAAATAAAATTGGAGAAAAATATGATTCGGCATATGTAGAA GCTGAAATGTTATTATTAGCTCTACTAAATGATTCACCCGATGGTTTAGCTGAAAGAATA TTAAAAGAAAGTGGTATAGATACCCAATTATTAGTTCAAGAAATTGATGATTATTTAAAA AAACAACCTAAGATGCCTAGTGGTTTTGGAGAACAGAAAATATTAGGTAGAACTTTACAA ACTGTATTAAGTACTAGTAAAAGATTAAAAAAAGAATTTAATGATGAATATATTTCCATA GAACACCTATTACTAAGTATCATTTCAGAAGATTCTAAATTTACTAGACCCTGGTTATTA AAATATAATGTAAATTATGAAAAAGTAAAAAAAGCTGTAGAAAAAATTCGAGGAAAAAAA AAAGTTACTTCTAAAACACCAGAAATGACTTATCAAGCTCTAGAAAAATATAGTAGAGAT CTAACAGCTTTGGCAAGAGCAGGAAAATTAGATCCTGTTATAGGTAGAGATAATGAAATT AGAAGAGCCATACAAATTTTATCCAGAAGAACTAAAAATAATCCTATCTTATTAGGAGAT CCTGGTGTTGGGAAAACAGCTATTGTTGAAGGGTTAGCCATAAAAATCGTACAAGGAGAT GTACCTGACTCATTAAAAGGAAGGAAATTAGTATCTTTAGATATGTCTTCTCTTATAGCT GGTGCAAAATATAGAGGTGATTTTGAAGAAAGGCTAAAATCAATTCTGAAAGAAGTACAA GATGCTGAAGGTCAAGTTGTTATGTTTATAGATGAAATCCATACTGTTGTGGGAGCTGGA GCGGTCGCAGAAGGTGCATTAGATGCTGGTAATATATTAAAACCTATGTTAGCTAGAGGT GAATTACGTTGTATTGGTGCTACGACGGTTAGTGAATATAGACAATTTATAGAAAAGGAT AAAGCATTAGAAAGAAGATTTCAACAAATTCTTGTTGAACAACCAAGTGTTGATGAAACT ATTAGTATATTAAGAGGTCTAAAAGAAAGATATGAAGTTCATCATGGTGTACGTATATTA GATTCTGCATTAGTACAAGCTGCTGTTTTATCAGATCGTTATATTAGTTATAGATTCTTA CCAGATAAAGCGATTGATCTTATTGACGAAGCTGCATCTAATCTTAAAATACAACTATCT AGTAAACCTATTCAATTAGAAAATATAGAAAAACAACTTATACAATTAGAAATGGAAAAA ATATCCATATTAGGAGATAAACAAAAGAATCTATTTAATTATTCTAGTGTAGCTAACACA CACAATAATAATAATAATAGTAGTATTAGTAGCAATAACTCGTCATCATATGGTAACGCT GAAGAAACTGAAGCAACTGTTGATTATACTAAAAGCCCCAATTTTTTAAAAAAAAGAATT AATGAAAAAGAAATTGATAGATTAAAAATGATCGATCGAATCATGAGCGAATTAAGAAAA GAACAAAGAAAAATCCTAGATTCTTGGTCCACCGAAAAAAGCTATGTAGATAATATCAGA GCTATTAAAGAAAGAATAGATGTTGTTAAAATAGAAATTGAAAAAGCTGAAAGATATTTT GATTTAAATAGAGCAGCTGAATTGAGATTTGAAACATTACCTGATTTAGAAAAACAATTA AAAAAAGCAGAAGAAAATTATCTAAATGATATCCCTGAAAAAAGTAGAATATTAAAAGAT GAAGTTACAAGTGAAGATATTGTTAATATTGTAAGTATGTCTACCGGTATCAGATTAAAT AAATTACTAAAATCTGAAAAAGAAAAAATACTTAATCTTGAAAATGAATTACATAAACAA ATTATCGGTCAAGATGATGCCGTAAAAGTTGTAACCAAAGCTGTTCAAAGATCTAGGGTT GGAATGAATAACCCTAAAAGACCAATAGCATCTTTAATGTTTTTAGGACCAACAGGAGTA GGAAAAACGGAATTATCTAAGGTATTGGCAGATGTATTATTTGACACACCAGAAGCAGTA ATTCATTTTGATATGTCTGAATATATGGAGAAGCATTCAATTAGTAAATTAATAGGTGCC GCACCAGGTTATGTGGGATATGAACAAGGAGGATTATTAACAGATGCAGTACGTAAAAAA CCATATTCTATCATTTTATTTGATGAAATAGAAAAAGCACATCCTGATGTATATAATTTA TTATTAAGAGTTATAGATGAGGGAAAATTATCTGATACCAAAGGAAATGTAGCTAATTTT AGAAATACAATTATTATATTTACATCCAATTTAGGAAGTCAAAGTATACTAGATCTAGCT AATGATCCAAATAAAAAAGAAAAAATCAAAGAACAGGTAATGAAATCAGTGAGAGAAACA TTTAGACCTGAATTTTATAACAGAATTGATGATCATGTTATATTTGATAGCTTATCAAAA AAAGAATTAAAAGAAATTGCAAATATTGAAATTAGAAAAGTAGCTAATCGTCTATTTGAT AAAAATTTTAAAATAACTATAGACGATGCTGTCTTTTCATATATAGTAGATAAAGCCTAT GATCCTTCTTTTGGTGCTAGACCTCTTAAAAGAGTTATACAATCTGAAATAGAAACGGAA ATTGCTGTAAGAATATTAGATGAAACCTTTGTAGAAAATGATACTATTAATATATCTCTC AAGGATCAGAAGTTGCACTTTTCAAAAAGTTAA
Download Fasta

Fasta :-

MVNSFFFCFVIIGLIYVWDITYSKKAKIFFNKNDIFSIKNTHWDIYDKKKYFFIGNNHLK NEESFLPEVRKDYKSQIKEYKNSTNGIIYHNNKNRLSYTINDQVNYDNNMTSGINKKRKV KDSSIHMNNSYEKNRNKNKFALFMSDEEYTINSDDYTEKAWEAISSLNKIGEKYDSAYVE AEMLLLALLNDSPDGLAERILKESGIDTQLLVQEIDDYLKKQPKMPSGFGEQKILGRTLQ TVLSTSKRLKKEFNDEYISIEHLLLSIISEDSKFTRPWLLKYNVNYEKVKKAVEKIRGKK KVTSKTPEMTYQALEKYSRDLTALARAGKLDPVIGRDNEIRRAIQILSRRTKNNPILLGD PGVGKTAIVEGLAIKIVQGDVPDSLKGRKLVSLDMSSLIAGAKYRGDFEERLKSILKEVQ DAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLARGELRCIGATTVSEYRQFIEKD KALERRFQQILVEQPSVDETISILRGLKERYEVHHGVRILDSALVQAAVLSDRYISYRFL PDKAIDLIDEAASNLKIQLSSKPIQLENIEKQLIQLEMEKISILGDKQKNLFNYSSVANT HNNNNNSSISSNNSSSYGNAEETEATVDYTKSPNFLKKRINEKEIDRLKMIDRIMSELRK EQRKILDSWSTEKSYVDNIRAIKERIDVVKIEIEKAERYFDLNRAAELRFETLPDLEKQL KKAEENYLNDIPEKSRILKDEVTSEDIVNIVSMSTGIRLNKLLKSEKEKILNLENELHKQ IIGQDDAVKVVTKAVQRSRVGMNNPKRPIASLMFLGPTGVGKTELSKVLADVLFDTPEAV IHFDMSEYMEKHSISKLIGAAPGYVGYEQGGLLTDAVRKKPYSIILFDEIEKAHPDVYNL LLRVIDEGKLSDTKGNVANFRNTIIIFTSNLGSQSILDLANDPNKKEKIKEQVMKSVRET FRPEFYNRIDDHVIFDSLSKKELKEIANIEIRKVANRLFDKNFKITIDDAVFSYIVDKAY DPSFGARPLKRVIQSEIETEIAVRILDETFVENDTINISLKDQKLHFSKS

Double Clp-N motif

title: ATP binding site
coordinates: D360,P361,G362,V363,G364,K365,T366,A367,D431,T469

PF3D7_0816600.pdb

PF3D7_0816600_site1.pdb

PF3D7_0816600_site2.pdb

PF3D7_0816600_site3.pdb

PF3D7_0816600_site4.pdb

PF3D7_0816600_site5.pdb

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PF3D7_0816600	384 S	DVPDSLKGR	0.991	unsp	PF3D7_0816600	384 S	DVPDSLKGR	0.991	unsp	PF3D7_0816600	384 S	DVPDSLKGR	0.991	unsp	PF3D7_0816600	536 S	DRYISYRFL	0.993	unsp	PF3D7_0816600	765 S	KLLKSEKEK	0.993	unsp	PF3D7_0816600	956 S	QVMKSVRET	0.997	unsp	PF3D7_0816600	979 S	FDSLSKKEL	0.997	unsp	PF3D7_0816600	1035 S	RVIQSEIET	0.991	unsp	PF3D7_0816600	1059 S	TINISLKDQ	0.997	unsp	PF3D7_0816600	37 S	NDIFSIKNT	0.991	unsp	PF3D7_0816600	204 S	ILKESGIDT	0.995	unsp

PF3D7_0816600 | chaperone protein ClpB1

ID's

UniProt_ID: Q8IB03

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0005524

Computed_GO_Functions: ATP binding

Computed_GO_Process_IDs: GO:0019538

Computed_GO_Processes: protein metabolic process

Curated_GO_Component_IDs: GO:0020011 GO:0005634

Curated_GO_Components: apicoplast nucleus

Curated_GO_Function_IDs: GO:0016887

Curated_GO_Functions: ATPase activity

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Double Clp-N motif

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

PF08_0063

Literature

PubMed

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India