PF3D7_0818600 | BEM46-like protein, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0818600SP0.2214140.7783390.000247CS pos: 20-21. VCA-LN. Pr: 0.6327
No Results

  • Fasta :-

    >PF3D7_0818600 MRIIKYIFFAFIILALFVCALNTYIYLKQDSFVFSNEFPTVEEKNQTLGENYEIVTLTTK DNHKFTCWYIKTKDSENKPIMLYFQGNGGYLEKYMNLFNLIIERVDVNIFSCSNRGCGSN IAKPSEEYFYKDAHVYIEYVKTKNPKHLFIFGSSMGAAVAIDTALKQHDHISGLIVQNAF TSLKELSRYSHPFLNYFLFDYDMIIRSKMDNETKIKNITVPTLFTLSEMDEKVPTSHTRT LFQLSASTNKQLYLSKGGTHPNILKNDDGSYHKAMKKFIVTAISIREKNIQKAVERNPNT PN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0818600.fa Sequence name : PF3D7_0818600 Sequence length : 302 VALUES OF COMPUTED PARAMETERS Coef20 : 5.073 CoefTot : 0.060 ChDiff : 6 ZoneTo : 29 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.253 2.729 0.456 0.905 MesoH : -0.648 0.212 -0.467 0.212 MuHd_075 : 19.905 19.816 5.830 6.067 MuHd_095 : 23.263 16.590 7.821 5.296 MuHd_100 : 24.185 16.349 6.790 5.911 MuHd_105 : 26.564 17.084 7.069 6.409 Hmax_075 : 23.000 27.800 6.052 9.100 Hmax_095 : 20.475 25.025 5.960 7.796 Hmax_100 : 20.600 26.100 4.951 8.220 Hmax_105 : 22.400 25.550 4.935 8.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6773 0.3227 DFMC : 0.8455 0.1545
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 302 PF3D7_0818600 MRIIKYIFFAFIILALFVCALNTYIYLKQDSFVFSNEFPTVEEKNQTLGENYEIVTLTTKDNHKFTCWYIKTKDSENKPI 80 MLYFQGNGGYLEKYMNLFNLIIERVDVNIFSCSNRGCGSNIAKPSEEYFYKDAHVYIEYVKTKNPKHLFIFGSSMGAAVA 160 IDTALKQHDHISGLIVQNAFTSLKELSRYSHPFLNYFLFDYDMIIRSKMDNETKIKNITVPTLFTLSEMDEKVPTSHTRT 240 LFQLSASTNKQLYLSKGGTHPNILKNDDGSYHKAMKKFIVTAISIREKNIQKAVERNPNTPN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0818600 2 -----MR|II 0.119 . PF3D7_0818600 5 --MRIIK|YI 0.155 . PF3D7_0818600 28 NTYIYLK|QD 0.068 . PF3D7_0818600 44 FPTVEEK|NQ 0.061 . PF3D7_0818600 60 IVTLTTK|DN 0.065 . PF3D7_0818600 64 TTKDNHK|FT 0.082 . PF3D7_0818600 71 FTCWYIK|TK 0.062 . PF3D7_0818600 73 CWYIKTK|DS 0.086 . PF3D7_0818600 78 TKDSENK|PI 0.073 . PF3D7_0818600 93 NGGYLEK|YM 0.059 . PF3D7_0818600 104 FNLIIER|VD 0.069 . PF3D7_0818600 115 IFSCSNR|GC 0.140 . PF3D7_0818600 123 CGSNIAK|PS 0.073 . PF3D7_0818600 131 SEEYFYK|DA 0.098 . PF3D7_0818600 141 VYIEYVK|TK 0.056 . PF3D7_0818600 143 IEYVKTK|NP 0.064 . PF3D7_0818600 146 VKTKNPK|HL 0.077 . PF3D7_0818600 166 AIDTALK|QH 0.058 . PF3D7_0818600 184 NAFTSLK|EL 0.062 . PF3D7_0818600 188 SLKELSR|YS 0.108 . PF3D7_0818600 206 DYDMIIR|SK 0.109 . PF3D7_0818600 208 DMIIRSK|MD 0.055 . PF3D7_0818600 214 KMDNETK|IK 0.066 . PF3D7_0818600 216 DNETKIK|NI 0.059 . PF3D7_0818600 232 LSEMDEK|VP 0.058 . PF3D7_0818600 239 VPTSHTR|TL 0.099 . PF3D7_0818600 250 LSASTNK|QL 0.066 . PF3D7_0818600 256 KQLYLSK|GG 0.056 . PF3D7_0818600 265 THPNILK|ND 0.061 . PF3D7_0818600 273 DDGSYHK|AM 0.059 . PF3D7_0818600 276 SYHKAMK|KF 0.064 . PF3D7_0818600 277 YHKAMKK|FI 0.117 . PF3D7_0818600 286 VTAISIR|EK 0.087 . PF3D7_0818600 288 AISIREK|NI 0.072 . PF3D7_0818600 292 REKNIQK|AV 0.086 . PF3D7_0818600 296 IQKAVER|NP 0.076 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0818600 ATGAGAATAATAAAATATATATTTTTTGCATTCATCATATTAGCCCTCTTCGTATGTGCC CTAAATACTTATATATATCTCAAACAAGACAGTTTTGTATTCTCAAATGAATTCCCTACT GTTGAAGAGAAAAACCAAACACTGGGAGAGAACTATGAAATCGTTACATTAACAACGAAG GATAATCATAAATTCACATGTTGGTATATTAAGACCAAAGATTCTGAGAACAAACCAATT ATGCTTTATTTTCAAGGAAACGGAGGATATTTAGAAAAATACATGAACTTATTTAATTTA ATTATAGAGAGAGTTGATGTCAACATATTTTCATGTTCAAACAGAGGTTGCGGATCTAAT ATTGCTAAACCATCAGAAGAATATTTTTATAAAGATGCTCATGTGTATATAGAATATGTG AAGACAAAAAATCCAAAGCATTTATTTATATTTGGAAGTTCAATGGGAGCCGCAGTTGCA ATTGACACGGCATTAAAACAGCACGATCATATAAGTGGATTAATTGTTCAGAATGCATTT ACAAGTTTAAAGGAGCTCTCGAGATATTCTCATCCATTCCTTAATTATTTCTTATTTGAT TATGACATGATAATAAGAAGTAAAATGGATAATGAAACAAAAATTAAAAATATTACAGTA CCAACCTTATTTACCTTATCTGAAATGGATGAAAAAGTACCAACAAGCCATACAAGAACA TTGTTTCAGTTAAGTGCAAGTACCAACAAACAATTATATTTATCTAAGGGAGGAACTCAT CCAAACATTCTGAAAAATGATGATGGTTCTTATCATAAAGCTATGAAGAAATTTATTGTT ACTGCTATTTCCATAAGGGAAAAAAATATTCAAAAGGCAGTAGAAAGAAATCCAAATACA CCTAATTAA
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  • Fasta :-

    MRIIKYIFFAFIILALFVCALNTYIYLKQDSFVFSNEFPTVEEKNQTLGENYEIVTLTTK DNHKFTCWYIKTKDSENKPIMLYFQGNGGYLEKYMNLFNLIIERVDVNIFSCSNRGCGSN IAKPSEEYFYKDAHVYIEYVKTKNPKHLFIFGSSMGAAVAIDTALKQHDHISGLIVQNAF TSLKELSRYSHPFLNYFLFDYDMIIRSKMDNETKIKNITVPTLFTLSEMDEKVPTSHTRT LFQLSASTNKQLYLSKGGTHPNILKNDDGSYHKAMKKFIVTAISIREKNIQKAVERNPNT PN

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0818600227 SLFTLSEMDE0.992unspPF3D7_0818600236 SKVPTSHTRT0.994unsp

MAL8P1.66      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India