PF3D7_0907400 | ATP-dependent protease ATPase subunit ClpY

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0907400OTHER0.9965070.0000520.003441
No Results

  • Fasta :-

    >PF3D7_0907400 MKNLDANKCIKLINGLKQKKNYPYFSLQCLKNISNEKEKIHDKLLTFIPNNSRKIINSGT KSNYDSRFDKLIQNNKNNKNYNNINYKVIDHNKSNEECNVKNNFSINNKNVHISDINVKQ KDKGDDLVIHIKYEPDNNKNGKKNEGQQILYNYDEMNYGNEDKTKLYIMNNYDEVGTKCN YKEYVSYNMNPHEYGKREDVNINGNNINNINNINSMNNINNINSINSINNNNINNSYNSY NNCKYINNNNNNDYNNFSRHGEKQKKYTMFLKKDDISKNIDQKEHINNLNSINNLDNMNE TCDDTTSCTHSKNTRSDKKTDASISGKDDIVRDSYSSDKKKENMENFAKVKITKENIINI NEIKEEDVKKVKKVMGHKKETNEYNIKDEKNDNIYDIKVDIKKEEKDNIYDIKVDIKNEE LPKSTIASEVPNHNSNVLKNDNIGKKNYFSSGSMKSGNVLKEEIKSDDSKINFQMKNGKS SKKCLYPHEIVEYLNKYIIGQSEAKKVVANALRQRWRRIQVSDDMKKDIIPKNILMIGPT GVGKTEIARRISMFVDAPFIKVEATKFTEVGFHGKDVDQIIKDLVEIAVKRQKTKFEIEI REQAEETVENIILYSLLGNIKEEEKNIWRKYLKDGSLDDKVISIDIPNYINNNIFSNDSV ENAVKEALSNHQNIKSVKIIHQNINKQSDKKTMTIREARQKLLQLEIDSSINQDTILKTA INSVEEEGIVFIDEIDKICSKSNSSYNGPDASAEGVQRDLLPLIEGCVINTKYGNINTNY ILFIASGAFQRVKPNDMLNELQGRLPVHVTLSSLTIKDFIDILTKTHNNLLQQNIALLKT EGIDLKFTDDAIETIANAAHDMNFYVENIGVRRLHTIIEKIMEDINYDVYNYVNQSIVID KDKVNKSLEGFIKQYDLKKYII
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0907400.fa Sequence name : PF3D7_0907400 Sequence length : 922 VALUES OF COMPUTED PARAMETERS Coef20 : 3.504 CoefTot : -1.985 ChDiff : 7 ZoneTo : 35 KR : 7 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.629 1.118 -0.100 0.462 MesoH : -0.790 0.249 -0.443 0.179 MuHd_075 : 20.756 14.239 8.577 4.395 MuHd_095 : 27.925 19.879 10.009 5.359 MuHd_100 : 27.061 22.386 9.883 5.582 MuHd_105 : 29.629 26.750 11.361 6.947 Hmax_075 : -5.250 -1.700 -0.853 1.855 Hmax_095 : 7.000 11.287 1.215 2.660 Hmax_100 : 3.100 10.900 -0.552 3.140 Hmax_105 : 3.300 15.400 1.078 3.130 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8456 0.1544 DFMC : 0.8365 0.1635
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 922 PF3D7_0907400 MKNLDANKCIKLINGLKQKKNYPYFSLQCLKNISNEKEKIHDKLLTFIPNNSRKIINSGTKSNYDSRFDKLIQNNKNNKN 80 YNNINYKVIDHNKSNEECNVKNNFSINNKNVHISDINVKQKDKGDDLVIHIKYEPDNNKNGKKNEGQQILYNYDEMNYGN 160 EDKTKLYIMNNYDEVGTKCNYKEYVSYNMNPHEYGKREDVNINGNNINNINNINSMNNINNINSINSINNNNINNSYNSY 240 NNCKYINNNNNNDYNNFSRHGEKQKKYTMFLKKDDISKNIDQKEHINNLNSINNLDNMNETCDDTTSCTHSKNTRSDKKT 320 DASISGKDDIVRDSYSSDKKKENMENFAKVKITKENIININEIKEEDVKKVKKVMGHKKETNEYNIKDEKNDNIYDIKVD 400 IKKEEKDNIYDIKVDIKNEELPKSTIASEVPNHNSNVLKNDNIGKKNYFSSGSMKSGNVLKEEIKSDDSKINFQMKNGKS 480 SKKCLYPHEIVEYLNKYIIGQSEAKKVVANALRQRWRRIQVSDDMKKDIIPKNILMIGPTGVGKTEIARRISMFVDAPFI 560 KVEATKFTEVGFHGKDVDQIIKDLVEIAVKRQKTKFEIEIREQAEETVENIILYSLLGNIKEEEKNIWRKYLKDGSLDDK 640 VISIDIPNYINNNIFSNDSVENAVKEALSNHQNIKSVKIIHQNINKQSDKKTMTIREARQKLLQLEIDSSINQDTILKTA 720 INSVEEEGIVFIDEIDKICSKSNSSYNGPDASAEGVQRDLLPLIEGCVINTKYGNINTNYILFIASGAFQRVKPNDMLNE 800 LQGRLPVHVTLSSLTIKDFIDILTKTHNNLLQQNIALLKTEGIDLKFTDDAIETIANAAHDMNFYVENIGVRRLHTIIEK 880 IMEDINYDVYNYVNQSIVIDKDKVNKSLEGFIKQYDLKKYII 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 .......................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0907400 2 -----MK|NL 0.071 . PF3D7_0907400 8 KNLDANK|CI 0.059 . PF3D7_0907400 11 DANKCIK|LI 0.065 . PF3D7_0907400 17 KLINGLK|QK 0.055 . PF3D7_0907400 19 INGLKQK|KN 0.069 . PF3D7_0907400 20 NGLKQKK|NY 0.073 . PF3D7_0907400 31 FSLQCLK|NI 0.061 . PF3D7_0907400 37 KNISNEK|EK 0.057 . PF3D7_0907400 39 ISNEKEK|IH 0.079 . PF3D7_0907400 43 KEKIHDK|LL 0.065 . PF3D7_0907400 53 FIPNNSR|KI 0.075 . PF3D7_0907400 54 IPNNSRK|II 0.141 . PF3D7_0907400 61 IINSGTK|SN 0.093 . PF3D7_0907400 67 KSNYDSR|FD 0.105 . PF3D7_0907400 70 YDSRFDK|LI 0.155 . PF3D7_0907400 76 KLIQNNK|NN 0.056 . PF3D7_0907400 79 QNNKNNK|NY 0.065 . PF3D7_0907400 87 YNNINYK|VI 0.074 . PF3D7_0907400 93 KVIDHNK|SN 0.083 . PF3D7_0907400 101 NEECNVK|NN 0.058 . PF3D7_0907400 109 NFSINNK|NV 0.081 . PF3D7_0907400 119 ISDINVK|QK 0.071 . PF3D7_0907400 121 DINVKQK|DK 0.111 . PF3D7_0907400 123 NVKQKDK|GD 0.068 . PF3D7_0907400 132 DLVIHIK|YE 0.063 . PF3D7_0907400 139 YEPDNNK|NG 0.060 . PF3D7_0907400 142 DNNKNGK|KN 0.086 . PF3D7_0907400 143 NNKNGKK|NE 0.125 . PF3D7_0907400 163 NYGNEDK|TK 0.059 . PF3D7_0907400 165 GNEDKTK|LY 0.071 . PF3D7_0907400 178 YDEVGTK|CN 0.065 . PF3D7_0907400 182 GTKCNYK|EY 0.061 . PF3D7_0907400 196 NPHEYGK|RE 0.065 . PF3D7_0907400 197 PHEYGKR|ED 0.110 . PF3D7_0907400 244 NSYNNCK|YI 0.071 . PF3D7_0907400 259 DYNNFSR|HG 0.108 . PF3D7_0907400 263 FSRHGEK|QK 0.062 . PF3D7_0907400 265 RHGEKQK|KY 0.067 . PF3D7_0907400 266 HGEKQKK|YT 0.106 . PF3D7_0907400 272 KYTMFLK|KD 0.062 . PF3D7_0907400 273 YTMFLKK|DD 0.112 . PF3D7_0907400 278 KKDDISK|NI 0.083 . PF3D7_0907400 283 SKNIDQK|EH 0.070 . PF3D7_0907400 312 TSCTHSK|NT 0.071 . PF3D7_0907400 315 THSKNTR|SD 0.175 . PF3D7_0907400 318 KNTRSDK|KT 0.216 . PF3D7_0907400 319 NTRSDKK|TD 0.076 . PF3D7_0907400 327 DASISGK|DD 0.073 . PF3D7_0907400 332 GKDDIVR|DS 0.092 . PF3D7_0907400 339 DSYSSDK|KK 0.067 . PF3D7_0907400 340 SYSSDKK|KE 0.091 . PF3D7_0907400 341 YSSDKKK|EN 0.156 . PF3D7_0907400 349 NMENFAK|VK 0.069 . PF3D7_0907400 351 ENFAKVK|IT 0.067 . PF3D7_0907400 354 AKVKITK|EN 0.069 . PF3D7_0907400 364 ININEIK|EE 0.061 . PF3D7_0907400 369 IKEEDVK|KV 0.075 . PF3D7_0907400 370 KEEDVKK|VK 0.097 . PF3D7_0907400 372 EDVKKVK|KV 0.076 . PF3D7_0907400 373 DVKKVKK|VM 0.121 . PF3D7_0907400 378 KKVMGHK|KE 0.058 . PF3D7_0907400 379 KVMGHKK|ET 0.107 . PF3D7_0907400 387 TNEYNIK|DE 0.060 . PF3D7_0907400 390 YNIKDEK|ND 0.055 . PF3D7_0907400 398 DNIYDIK|VD 0.060 . PF3D7_0907400 402 DIKVDIK|KE 0.058 . PF3D7_0907400 403 IKVDIKK|EE 0.088 . PF3D7_0907400 406 DIKKEEK|DN 0.064 . PF3D7_0907400 413 DNIYDIK|VD 0.066 . PF3D7_0907400 417 DIKVDIK|NE 0.058 . PF3D7_0907400 423 KNEELPK|ST 0.093 . PF3D7_0907400 439 HNSNVLK|ND 0.082 . PF3D7_0907400 445 KNDNIGK|KN 0.061 . PF3D7_0907400 446 NDNIGKK|NY 0.118 . PF3D7_0907400 455 FSSGSMK|SG 0.089 . PF3D7_0907400 461 KSGNVLK|EE 0.069 . PF3D7_0907400 465 VLKEEIK|SD 0.075 . PF3D7_0907400 470 IKSDDSK|IN 0.082 . PF3D7_0907400 476 KINFQMK|NG 0.067 . PF3D7_0907400 479 FQMKNGK|SS 0.086 . PF3D7_0907400 482 KNGKSSK|KC 0.058 . PF3D7_0907400 483 NGKSSKK|CL 0.126 . PF3D7_0907400 496 IVEYLNK|YI 0.066 . PF3D7_0907400 505 IGQSEAK|KV 0.075 . PF3D7_0907400 506 GQSEAKK|VV 0.180 . PF3D7_0907400 513 VVANALR|QR 0.074 . PF3D7_0907400 515 ANALRQR|WR 0.094 . PF3D7_0907400 517 ALRQRWR|RI 0.111 . PF3D7_0907400 518 LRQRWRR|IQ 0.351 . PF3D7_0907400 526 QVSDDMK|KD 0.059 . PF3D7_0907400 527 VSDDMKK|DI 0.124 . PF3D7_0907400 532 KKDIIPK|NI 0.071 . PF3D7_0907400 544 GPTGVGK|TE 0.062 . PF3D7_0907400 549 GKTEIAR|RI 0.092 . PF3D7_0907400 550 KTEIARR|IS 0.127 . PF3D7_0907400 561 VDAPFIK|VE 0.061 . PF3D7_0907400 566 IKVEATK|FT 0.103 . PF3D7_0907400 575 EVGFHGK|DV 0.148 . PF3D7_0907400 582 DVDQIIK|DL 0.057 . PF3D7_0907400 590 LVEIAVK|RQ 0.057 . PF3D7_0907400 591 VEIAVKR|QK 0.183 . PF3D7_0907400 593 IAVKRQK|TK 0.067 . PF3D7_0907400 595 VKRQKTK|FE 0.090 . PF3D7_0907400 601 KFEIEIR|EQ 0.072 . PF3D7_0907400 621 SLLGNIK|EE 0.059 . PF3D7_0907400 625 NIKEEEK|NI 0.058 . PF3D7_0907400 629 EEKNIWR|KY 0.071 . PF3D7_0907400 630 EKNIWRK|YL 0.116 . PF3D7_0907400 633 IWRKYLK|DG 0.071 . PF3D7_0907400 640 DGSLDDK|VI 0.071 . PF3D7_0907400 665 SVENAVK|EA 0.058 . PF3D7_0907400 675 SNHQNIK|SV 0.148 . PF3D7_0907400 678 QNIKSVK|II 0.083 . PF3D7_0907400 686 IHQNINK|QS 0.075 . PF3D7_0907400 690 INKQSDK|KT 0.076 . PF3D7_0907400 691 NKQSDKK|TM 0.090 . PF3D7_0907400 696 KKTMTIR|EA 0.140 . PF3D7_0907400 699 MTIREAR|QK 0.238 . PF3D7_0907400 701 IREARQK|LL 0.070 . PF3D7_0907400 718 NQDTILK|TA 0.059 . PF3D7_0907400 737 FIDEIDK|IC 0.059 . PF3D7_0907400 741 IDKICSK|SN 0.072 . PF3D7_0907400 758 SAEGVQR|DL 0.110 . PF3D7_0907400 772 GCVINTK|YG 0.062 . PF3D7_0907400 791 ASGAFQR|VK 0.073 . PF3D7_0907400 793 GAFQRVK|PN 0.064 . PF3D7_0907400 804 LNELQGR|LP 0.076 . PF3D7_0907400 817 LSSLTIK|DF 0.100 . PF3D7_0907400 825 FIDILTK|TH 0.056 . PF3D7_0907400 839 QNIALLK|TE 0.062 . PF3D7_0907400 846 TEGIDLK|FT 0.098 . PF3D7_0907400 872 VENIGVR|RL 0.087 . PF3D7_0907400 873 ENIGVRR|LH 0.134 . PF3D7_0907400 880 LHTIIEK|IM 0.062 . PF3D7_0907400 901 QSIVIDK|DK 0.065 . PF3D7_0907400 903 IVIDKDK|VN 0.062 . PF3D7_0907400 906 DKDKVNK|SL 0.102 . PF3D7_0907400 913 SLEGFIK|QY 0.069 . PF3D7_0907400 918 IKQYDLK|KY 0.067 . PF3D7_0907400 919 KQYDLKK|YI 0.119 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0907400 ATGAAAAACCTTGACGCAAACAAATGTATTAAGCTTATTAACGGTTTGAAGCAAAAGAAG AATTATCCTTATTTCTCCTTACAATGTTTAAAAAATATAAGTAATGAGAAGGAGAAGATT CATGATAAGCTTTTAACATTTATTCCAAATAATAGTAGGAAAATAATAAACTCAGGTACC AAGAGTAATTATGACAGTAGGTTTGATAAGTTAATTCAAAATAATAAGAATAATAAGAAT TATAATAATATTAATTATAAAGTTATTGATCATAATAAGTCTAATGAGGAATGTAATGTA AAAAACAATTTTTCAATAAATAATAAAAATGTACATATATCTGATATAAATGTAAAGCAA AAAGATAAGGGGGATGATTTAGTAATACATATAAAATATGAACCTGATAATAATAAAAAT GGAAAAAAAAATGAAGGTCAACAAATATTATATAATTATGATGAAATGAATTATGGTAAT GAGGATAAGACCAAATTATATATTATGAATAATTATGATGAAGTAGGAACAAAATGTAAT TATAAGGAGTATGTGTCTTATAATATGAATCCACATGAATATGGAAAAAGGGAAGATGTG AACATTAATGGTAATAATATAAACAATATAAATAATATAAATAGTATGAATAATATAAAT AATATAAATAGTATAAATAGTATAAATAATAATAATATTAATAATTCTTATAATAGTTAT AATAATTGTAAATATATAAATAATAATAATAATAATGATTATAATAATTTTAGTCGACAT GGAGAAAAACAAAAGAAGTATACAATGTTTTTAAAGAAAGATGATATATCAAAAAATATA GATCAAAAAGAACATATTAATAATTTAAATAGTATAAATAATTTAGATAATATGAATGAA ACATGTGATGATACTACTTCTTGTACACATAGTAAGAACACAAGAAGTGATAAAAAGACA GATGCGTCAATTTCAGGAAAGGATGATATCGTGAGAGATAGTTATTCATCGGATAAAAAA AAGGAGAACATGGAAAATTTTGCCAAGGTTAAAATAACGAAGGAAAATATTATTAATATT AACGAAATAAAAGAAGAAGATGTTAAGAAAGTTAAAAAGGTTATGGGACATAAAAAGGAA ACAAACGAATATAATATAAAAGATGAAAAAAATGATAATATATATGATATTAAGGTAGAT ATAAAAAAGGAAGAGAAGGATAACATATATGATATTAAGGTAGATATAAAAAATGAAGAA CTACCCAAAAGTACCATTGCAAGTGAGGTACCAAACCATAATTCTAATGTTTTAAAAAAT GATAATATTGGAAAGAAGAATTATTTTAGTAGTGGTAGTATGAAAAGTGGTAATGTGCTT AAAGAGGAAATAAAATCAGATGATAGTAAAATAAATTTTCAAATGAAAAATGGGAAAAGT AGTAAGAAATGTTTATATCCTCATGAGATTGTGGAATATTTGAATAAATATATAATAGGT CAAAGTGAAGCTAAAAAAGTTGTTGCTAATGCATTACGACAAAGATGGAGAAGAATACAA GTTAGTGATGATATGAAAAAGGATATTATACCAAAAAATATTTTAATGATAGGACCTACA GGTGTTGGTAAAACAGAAATAGCAAGACGTATATCTATGTTTGTCGATGCACCGTTTATT AAAGTAGAAGCAACAAAGTTTACAGAAGTTGGATTTCATGGTAAAGATGTAGATCAAATT ATAAAAGATTTGGTTGAAATAGCTGTAAAAAGGCAAAAAACAAAATTTGAAATTGAGATC AGAGAACAAGCTGAAGAAACTGTTGAAAATATTATACTTTATTCATTATTAGGTAATATA AAAGAAGAAGAAAAAAATATCTGGAGGAAATATTTGAAAGATGGATCATTAGATGATAAG GTTATTAGTATAGATATACCTAATTATATTAATAACAATATTTTTTCAAATGATTCTGTT GAAAATGCTGTAAAGGAAGCCTTAAGTAATCATCAGAATATCAAAAGTGTAAAAATAATA CATCAAAATATAAATAAACAGAGTGATAAAAAAACAATGACTATTAGGGAAGCAAGACAA AAATTATTACAACTAGAAATTGATTCTTCAATAAATCAAGATACGATTTTAAAAACAGCT ATAAATTCTGTAGAAGAAGAAGGAATTGTTTTTATAGATGAAATAGATAAAATTTGTTCA AAATCTAATTCTTCATATAATGGACCAGATGCAAGTGCTGAAGGTGTACAAAGAGATCTT CTTCCTTTAATCGAAGGATGTGTTATAAATACAAAATATGGTAATATAAATACTAATTAT ATTTTATTTATAGCTTCAGGGGCTTTTCAAAGAGTTAAACCTAATGATATGCTAAATGAA TTACAAGGAAGATTACCAGTACATGTTACATTATCTAGTTTAACCATAAAAGATTTTATA GATATATTAACAAAAACACATAATAACTTATTACAACAAAATATAGCTCTACTAAAAACA GAAGGCATAGATCTCAAATTTACTGATGATGCTATTGAAACTATAGCCAATGCAGCACAT GATATGAATTTCTATGTAGAAAATATTGGTGTCAGACGATTACATACAATCATTGAAAAA ATTATGGAAGATATTAATTATGATGTATACAATTATGTAAACCAATCTATTGTCATTGAT AAAGACAAAGTCAACAAATCGCTGGAAGGTTTTATTAAGCAATACGACTTAAAAAAATAT ATCATATAA
  • Download Fasta

  • Fasta :-

    MKNLDANKCIKLINGLKQKKNYPYFSLQCLKNISNEKEKIHDKLLTFIPNNSRKIINSGT KSNYDSRFDKLIQNNKNNKNYNNINYKVIDHNKSNEECNVKNNFSINNKNVHISDINVKQ KDKGDDLVIHIKYEPDNNKNGKKNEGQQILYNYDEMNYGNEDKTKLYIMNNYDEVGTKCN YKEYVSYNMNPHEYGKREDVNINGNNINNINNINSMNNINNINSINSINNNNINNSYNSY NNCKYINNNNNNDYNNFSRHGEKQKKYTMFLKKDDISKNIDQKEHINNLNSINNLDNMNE TCDDTTSCTHSKNTRSDKKTDASISGKDDIVRDSYSSDKKKENMENFAKVKITKENIINI NEIKEEDVKKVKKVMGHKKETNEYNIKDEKNDNIYDIKVDIKKEEKDNIYDIKVDIKNEE LPKSTIASEVPNHNSNVLKNDNIGKKNYFSSGSMKSGNVLKEEIKSDDSKINFQMKNGKS SKKCLYPHEIVEYLNKYIIGQSEAKKVVANALRQRWRRIQVSDDMKKDIIPKNILMIGPT GVGKTEIARRISMFVDAPFIKVEATKFTEVGFHGKDVDQIIKDLVEIAVKRQKTKFEIEI REQAEETVENIILYSLLGNIKEEEKNIWRKYLKDGSLDDKVISIDIPNYINNNIFSNDSV ENAVKEALSNHQNIKSVKIIHQNINKQSDKKTMTIREARQKLLQLEIDSSINQDTILKTA INSVEEEGIVFIDEIDKICSKSNSSYNGPDASAEGVQRDLLPLIEGCVINTKYGNINTNY ILFIASGAFQRVKPNDMLNELQGRLPVHVTLSSLTIKDFIDILTKTHNNLLQQNIALLKT EGIDLKFTDDAIETIANAAHDMNFYVENIGVRRLHTIIEKIMEDINYDVYNYVNQSIVID KDKVNKSLEGFIKQYDLKKYII

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0907400325 SDASISGKDD0.998unspPF3D7_0907400325 SDASISGKDD0.998unspPF3D7_0907400325 SDASISGKDD0.998unspPF3D7_0907400334 SIVRDSYSSD0.996unspPF3D7_0907400337 SDSYSSDKKK0.996unspPF3D7_0907400481 SNGKSSKKCL0.994unspPF3D7_0907400659 SFSNDSVENA0.994unspPF3D7_090740062 SSGTKSNYDS0.993unspPF3D7_0907400316 SKNTRSDKKT0.995unsp

PFI0355c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India