PF3D7_1009500 | metalloprotease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:  GO:0008237      

  • Curated_GO_Functions:  metallopeptidase activity      

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1009500OTHER0.9998070.0000300.000163
No Results

  • Fasta :-

    >PF3D7_1009500 MNIKTIDDVIYKVHNIKVLNKNDKKAKAILSRAAEQVLPIMKKRRFRVELLSEFLPKNPN LLGLNIVKKSEIKIRLRKTKGGEIFHFNDIMGTLLHELVHIVHSRHDKSFYELLDKITWE YNELYVYNKKGISGGDKVSTNIIKYNLGRNNIMKDNIILDITKMNNVISICEENPKFMAA QAAEKRLLNNFMNNQGEIVNASLLSCLTKEQRENLLNNRKKYDDIICCLDNDIILIDTIS DTYDKEYDHKSMVSQKKSDNVSFLENTKDNINNNIDYTYMQHLNDNERKQEKKENELMIT QNYNNQFEGKPNVIEILTPDIKKKKNKRKNLIESNNGIFDLSQNDGDDNSQVLKRKKGNQ KDMKSDKNDEVIFLK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1009500.fa Sequence name : PF3D7_1009500 Sequence length : 375 VALUES OF COMPUTED PARAMETERS Coef20 : 3.614 CoefTot : -0.247 ChDiff : 10 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.018 1.212 -0.042 0.415 MesoH : -1.442 -0.033 -0.644 0.071 MuHd_075 : 29.561 9.148 6.870 3.781 MuHd_095 : 24.277 18.059 6.285 5.314 MuHd_100 : 24.095 20.898 7.616 5.634 MuHd_105 : 26.773 24.974 9.665 6.511 Hmax_075 : 6.183 6.500 -0.442 3.348 Hmax_095 : 2.100 9.888 -1.354 3.255 Hmax_100 : 0.900 14.500 -0.629 4.120 Hmax_105 : 12.800 22.900 3.338 7.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8541 0.1459 DFMC : 0.9593 0.0407
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 375 PF3D7_1009500 MNIKTIDDVIYKVHNIKVLNKNDKKAKAILSRAAEQVLPIMKKRRFRVELLSEFLPKNPNLLGLNIVKKSEIKIRLRKTK 80 GGEIFHFNDIMGTLLHELVHIVHSRHDKSFYELLDKITWEYNELYVYNKKGISGGDKVSTNIIKYNLGRNNIMKDNIILD 160 ITKMNNVISICEENPKFMAAQAAEKRLLNNFMNNQGEIVNASLLSCLTKEQRENLLNNRKKYDDIICCLDNDIILIDTIS 240 DTYDKEYDHKSMVSQKKSDNVSFLENTKDNINNNIDYTYMQHLNDNERKQEKKENELMITQNYNNQFEGKPNVIEILTPD 320 IKKKKNKRKNLIESNNGIFDLSQNDGDDNSQVLKRKKGNQKDMKSDKNDEVIFLK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1009500 4 ---MNIK|TI 0.069 . PF3D7_1009500 12 IDDVIYK|VH 0.056 . PF3D7_1009500 17 YKVHNIK|VL 0.062 . PF3D7_1009500 21 NIKVLNK|ND 0.060 . PF3D7_1009500 24 VLNKNDK|KA 0.081 . PF3D7_1009500 25 LNKNDKK|AK 0.081 . PF3D7_1009500 27 KNDKKAK|AI 0.069 . PF3D7_1009500 32 AKAILSR|AA 0.208 . PF3D7_1009500 42 QVLPIMK|KR 0.052 . PF3D7_1009500 43 VLPIMKK|RR 0.085 . PF3D7_1009500 44 LPIMKKR|RF 0.235 . PF3D7_1009500 45 PIMKKRR|FR 0.182 . PF3D7_1009500 47 MKKRRFR|VE 0.227 . PF3D7_1009500 57 LSEFLPK|NP 0.062 . PF3D7_1009500 68 LGLNIVK|KS 0.060 . PF3D7_1009500 69 GLNIVKK|SE 0.193 . PF3D7_1009500 73 VKKSEIK|IR 0.056 . PF3D7_1009500 75 KSEIKIR|LR 0.108 . PF3D7_1009500 77 EIKIRLR|KT 0.091 . PF3D7_1009500 78 IKIRLRK|TK 0.356 . PF3D7_1009500 80 IRLRKTK|GG 0.181 . PF3D7_1009500 105 VHIVHSR|HD 0.083 . PF3D7_1009500 108 VHSRHDK|SF 0.299 . PF3D7_1009500 116 FYELLDK|IT 0.057 . PF3D7_1009500 129 ELYVYNK|KG 0.064 . PF3D7_1009500 130 LYVYNKK|GI 0.126 . PF3D7_1009500 137 GISGGDK|VS 0.066 . PF3D7_1009500 144 VSTNIIK|YN 0.062 . PF3D7_1009500 149 IKYNLGR|NN 0.092 . PF3D7_1009500 154 GRNNIMK|DN 0.101 . PF3D7_1009500 163 IILDITK|MN 0.058 . PF3D7_1009500 176 ICEENPK|FM 0.065 . PF3D7_1009500 185 AAQAAEK|RL 0.057 . PF3D7_1009500 186 AQAAEKR|LL 0.143 . PF3D7_1009500 209 LLSCLTK|EQ 0.070 . PF3D7_1009500 212 CLTKEQR|EN 0.065 . PF3D7_1009500 219 ENLLNNR|KK 0.070 . PF3D7_1009500 220 NLLNNRK|KY 0.083 . PF3D7_1009500 221 LLNNRKK|YD 0.141 . PF3D7_1009500 245 ISDTYDK|EY 0.061 . PF3D7_1009500 250 DKEYDHK|SM 0.072 . PF3D7_1009500 256 KSMVSQK|KS 0.076 . PF3D7_1009500 257 SMVSQKK|SD 0.163 . PF3D7_1009500 268 SFLENTK|DN 0.060 . PF3D7_1009500 288 HLNDNER|KQ 0.115 . PF3D7_1009500 289 LNDNERK|QE 0.084 . PF3D7_1009500 292 NERKQEK|KE 0.066 . PF3D7_1009500 293 ERKQEKK|EN 0.120 . PF3D7_1009500 310 NNQFEGK|PN 0.072 . PF3D7_1009500 322 ILTPDIK|KK 0.056 . PF3D7_1009500 323 LTPDIKK|KK 0.075 . PF3D7_1009500 324 TPDIKKK|KN 0.117 . PF3D7_1009500 325 PDIKKKK|NK 0.117 . PF3D7_1009500 327 IKKKKNK|RK 0.077 . PF3D7_1009500 328 KKKKNKR|KN 0.149 . PF3D7_1009500 329 KKKNKRK|NL 0.131 . PF3D7_1009500 354 DNSQVLK|RK 0.068 . PF3D7_1009500 355 NSQVLKR|KK 0.291 . PF3D7_1009500 356 SQVLKRK|KG 0.090 . PF3D7_1009500 357 QVLKRKK|GN 0.102 . PF3D7_1009500 361 RKKGNQK|DM 0.068 . PF3D7_1009500 364 GNQKDMK|SD 0.091 . PF3D7_1009500 367 KDMKSDK|ND 0.072 . PF3D7_1009500 375 DEVIFLK|-- 0.062 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1009500 ATGAATATAAAGACCATCGATGATGTAATATATAAAGTTCATAATATAAAAGTTTTAAAC AAAAATGATAAGAAGGCAAAAGCGATTTTAAGCCGAGCTGCCGAGCAAGTTCTGCCCATA ATGAAGAAGCGAAGATTTCGCGTGGAATTACTCTCAGAATTTTTACCAAAAAACCCCAAT TTGTTGGGGCTCAATATTGTAAAAAAGTCAGAAATAAAGATACGACTACGTAAAACCAAA GGAGGAGAGATATTTCATTTTAATGACATTATGGGGACACTTCTTCATGAACTTGTACAT ATAGTTCATAGTCGACATGATAAATCTTTTTATGAGTTACTAGACAAAATAACTTGGGAG TATAACGAGTTATATGTATATAATAAGAAGGGTATATCTGGAGGAGATAAGGTTAGTACT AATATAATTAAATATAATTTGGGTAGAAATAATATAATGAAAGATAATATAATTCTGGAT ATTACAAAAATGAATAATGTAATTAGTATTTGTGAAGAGAATCCTAAGTTTATGGCTGCT CAAGCCGCAGAAAAAAGACTGCTTAATAATTTTATGAATAATCAAGGAGAGATTGTGAAT GCATCCCTTTTAAGTTGTTTAACTAAAGAACAACGTGAAAATTTATTAAATAATAGAAAA AAATATGATGATATAATTTGTTGTTTAGATAATGATATTATTTTAATCGATACAATCTCT GATACATATGATAAGGAATATGATCATAAAAGTATGGTTTCTCAAAAGAAAAGTGATAAT GTATCATTTTTAGAAAATACAAAAGATAATATAAATAATAATATTGATTATACTTACATG CAACATTTAAATGATAATGAACGAAAACAAGAAAAAAAAGAAAATGAACTTATGATTACA CAAAATTATAATAACCAATTCGAAGGAAAACCAAATGTTATAGAAATATTGACACCAGAT ATAAAAAAAAAAAAGAATAAAAGAAAGAACTTAATTGAATCAAATAATGGCATTTTTGAT CTTTCACAAAATGATGGAGATGATAACTCTCAGGTTTTAAAAAGAAAAAAGGGTAACCAA AAAGACATGAAAAGTGATAAAAATGATGAGGTCATTTTTTTAAAATGA
  • Download Fasta

  • Fasta :-

    MNIKTIDDVIYKVHNIKVLNKNDKKAKAILSRAAEQVLPIMKKRRFRVELLSEFLPKNPN LLGLNIVKKSEIKIRLRKTKGGEIFHFNDIMGTLLHELVHIVHSRHDKSFYELLDKITWE YNELYVYNKKGISGGDKVSTNIIKYNLGRNNIMKDNIILDITKMNNVISICEENPKFMAA QAAEKRLLNNFMNNQGEIVNASLLSCLTKEQRENLLNNRKKYDDIICCLDNDIILIDTIS DTYDKEYDHKSMVSQKKSDNVSFLENTKDNINNNIDYTYMQHLNDNERKQEKKENELMIT QNYNNQFEGKPNVIEILTPDIKKKKNKRKNLIESNNGIFDLSQNDGDDNSQVLKRKKGNQ KDMKSDKNDEVIFLK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1009500342 SIFDLSQNDG0.992unspPF3D7_1009500342 SIFDLSQNDG0.992unspPF3D7_1009500342 SIFDLSQNDG0.992unspPF3D7_1009500365 SKDMKSDKND0.994unspPF3D7_1009500109 SRHDKSFYEL0.991unspPF3D7_1009500133 SKKGISGGDK0.99unsp

PF10_0092      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India