PF3D7_1015300 | methionine aminopeptidase 1b, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1015300OTHER0.9999340.0000220.000044
No Results

  • Fasta :-

    >PF3D7_1015300 MANIDDIEKQIENIKINSDDNKNNVSKNKNILLNGVNLKDHEIKDNVKSVDYNNNNNEND TMNEINKHVKNDEYCNKENSNNNNNNNNNNNNNLDTQINETLNLNEKFEKKNEENLCSGC KKVLIKKLSCPICLKNKIFSYFCNQECFKGSWKEHQKIHENMNKENNEKEDHLKTIVKKH LSPENFDPTNRKYWVYDDHLKNFVNFKFTGDVRPWPLSKINHVPSHIERPDYAISSIPES ELIYKRKSDIYVNNEEEIQRIREACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFIIKNN AYPSTLNYYKFPKSCCTSVNEIVCHGIPDYRPLKSGDIINIDISVFYKGVHSDLNETYFV GDINDVPKEGKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVVRSYSGHG VGKLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPMINQGHYSDVLWPDQWTSATSDGKLSA QFEHTLLITNNGVEILTKRTQDSPPLGFDTKDELYYN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1015300.fa Sequence name : PF3D7_1015300 Sequence length : 517 VALUES OF COMPUTED PARAMETERS Coef20 : 3.026 CoefTot : 0.007 ChDiff : -3 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.553 0.906 -0.059 0.471 MesoH : -0.762 0.003 -0.492 0.145 MuHd_075 : 9.802 10.752 3.410 3.360 MuHd_095 : 21.143 16.159 6.958 4.429 MuHd_100 : 26.305 17.763 7.794 5.060 MuHd_105 : 31.707 19.805 8.757 6.076 Hmax_075 : -6.900 5.863 -2.990 2.660 Hmax_095 : -0.600 9.800 -1.219 3.140 Hmax_100 : 4.100 10.200 -0.037 3.790 Hmax_105 : 11.600 15.600 1.913 5.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9259 0.0741 DFMC : 0.9638 0.0362
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 517 PF3D7_1015300 MANIDDIEKQIENIKINSDDNKNNVSKNKNILLNGVNLKDHEIKDNVKSVDYNNNNNENDTMNEINKHVKNDEYCNKENS 80 NNNNNNNNNNNNNLDTQINETLNLNEKFEKKNEENLCSGCKKVLIKKLSCPICLKNKIFSYFCNQECFKGSWKEHQKIHE 160 NMNKENNEKEDHLKTIVKKHLSPENFDPTNRKYWVYDDHLKNFVNFKFTGDVRPWPLSKINHVPSHIERPDYAISSIPES 240 ELIYKRKSDIYVNNEEEIQRIREACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCCTSVN 320 EIVCHGIPDYRPLKSGDIINIDISVFYKGVHSDLNETYFVGDINDVPKEGKELVETCYFSLMEAIKKCKPGMFYKNIGTL 400 IDAYVSKKNFSVVRSYSGHGVGKLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPMINQGHYSDVLWPDQWTSATSDGKLSA 480 QFEHTLLITNNGVEILTKRTQDSPPLGFDTKDELYYN 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1015300 9 NIDDIEK|QI 0.061 . PF3D7_1015300 15 KQIENIK|IN 0.063 . PF3D7_1015300 22 INSDDNK|NN 0.069 . PF3D7_1015300 27 NKNNVSK|NK 0.077 . PF3D7_1015300 29 NNVSKNK|NI 0.066 . PF3D7_1015300 39 LNGVNLK|DH 0.075 . PF3D7_1015300 44 LKDHEIK|DN 0.077 . PF3D7_1015300 48 EIKDNVK|SV 0.093 . PF3D7_1015300 67 TMNEINK|HV 0.088 . PF3D7_1015300 70 EINKHVK|ND 0.068 . PF3D7_1015300 77 NDEYCNK|EN 0.065 . PF3D7_1015300 107 TLNLNEK|FE 0.069 . PF3D7_1015300 110 LNEKFEK|KN 0.072 . PF3D7_1015300 111 NEKFEKK|NE 0.091 . PF3D7_1015300 121 NLCSGCK|KV 0.063 . PF3D7_1015300 122 LCSGCKK|VL 0.147 . PF3D7_1015300 126 CKKVLIK|KL 0.065 . PF3D7_1015300 127 KKVLIKK|LS 0.079 . PF3D7_1015300 135 SCPICLK|NK 0.053 . PF3D7_1015300 137 PICLKNK|IF 0.065 . PF3D7_1015300 149 CNQECFK|GS 0.070 . PF3D7_1015300 153 CFKGSWK|EH 0.060 . PF3D7_1015300 157 SWKEHQK|IH 0.066 . PF3D7_1015300 164 IHENMNK|EN 0.077 . PF3D7_1015300 169 NKENNEK|ED 0.058 . PF3D7_1015300 174 EKEDHLK|TI 0.066 . PF3D7_1015300 178 HLKTIVK|KH 0.056 . PF3D7_1015300 179 LKTIVKK|HL 0.164 . PF3D7_1015300 191 NFDPTNR|KY 0.077 . PF3D7_1015300 192 FDPTNRK|YW 0.075 . PF3D7_1015300 201 VYDDHLK|NF 0.054 . PF3D7_1015300 207 KNFVNFK|FT 0.122 . PF3D7_1015300 213 KFTGDVR|PW 0.070 . PF3D7_1015300 219 RPWPLSK|IN 0.062 . PF3D7_1015300 229 VPSHIER|PD 0.103 . PF3D7_1015300 245 ESELIYK|RK 0.064 . PF3D7_1015300 246 SELIYKR|KS 0.156 . PF3D7_1015300 247 ELIYKRK|SD 0.140 . PF3D7_1015300 260 NEEEIQR|IR 0.082 . PF3D7_1015300 262 EEIQRIR|EA 0.087 . PF3D7_1015300 269 EACILGR|KT 0.097 . PF3D7_1015300 270 ACILGRK|TL 0.069 . PF3D7_1015300 290 TTDEIDR|KV 0.089 . PF3D7_1015300 291 TDEIDRK|VH 0.083 . PF3D7_1015300 298 VHEFIIK|NN 0.054 . PF3D7_1015300 310 STLNYYK|FP 0.059 . PF3D7_1015300 313 NYYKFPK|SC 0.100 . PF3D7_1015300 331 HGIPDYR|PL 0.079 . PF3D7_1015300 334 PDYRPLK|SG 0.163 . PF3D7_1015300 348 DISVFYK|GV 0.114 . PF3D7_1015300 368 DINDVPK|EG 0.067 . PF3D7_1015300 371 DVPKEGK|EL 0.054 . PF3D7_1015300 386 SLMEAIK|KC 0.069 . PF3D7_1015300 387 LMEAIKK|CK 0.078 . PF3D7_1015300 389 EAIKKCK|PG 0.061 . PF3D7_1015300 395 KPGMFYK|NI 0.097 . PF3D7_1015300 407 IDAYVSK|KN 0.077 . PF3D7_1015300 408 DAYVSKK|NF 0.112 . PF3D7_1015300 414 KNFSVVR|SY 0.191 . PF3D7_1015300 423 SGHGVGK|LF 0.071 . PF3D7_1015300 435 PTVPHFK|KN 0.071 . PF3D7_1015300 436 TVPHFKK|NK 0.113 . PF3D7_1015300 438 PHFKKNK|AV 0.114 . PF3D7_1015300 444 KAVGIMK|PG 0.059 . PF3D7_1015300 477 SATSDGK|LS 0.068 . PF3D7_1015300 498 GVEILTK|RT 0.064 . PF3D7_1015300 499 VEILTKR|TQ 0.117 . PF3D7_1015300 511 PLGFDTK|DE 0.061 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1015300 ATGGCAAATATTGATGATATAGAAAAACAAATTGAAAATATAAAAATAAATTCAGATGAT AATAAGAATAATGTTTCCAAGAATAAAAATATTTTATTAAATGGAGTAAATTTGAAAGAT CATGAAATAAAAGATAATGTTAAATCTGTTGATTATAATAATAATAATAATGAAAATGAT ACTATGAATGAAATAAATAAACATGTTAAAAATGATGAATATTGTAATAAAGAAAATAGT AATAATAATAATAATAATAATAATAATAATAATAATAATTTAGATACACAGATAAATGAG ACTTTAAATTTAAATGAAAAATTTGAAAAAAAAAATGAAGAAAATTTGTGTAGTGGATGC AAAAAAGTATTAATTAAAAAATTAAGTTGCCCTATATGTTTAAAAAATAAAATATTTAGT TATTTTTGTAATCAAGAATGTTTTAAGGGTTCTTGGAAAGAACATCAAAAGATACATGAA AATATGAATAAGGAAAATAATGAAAAAGAAGATCATTTGAAGACCATAGTTAAAAAACAT TTATCACCAGAAAATTTTGATCCTACTAATAGAAAATATTGGGTTTATGATGACCATTTA AAAAACTTTGTTAATTTTAAATTCACAGGAGATGTGCGACCATGGCCTTTATCTAAAATT AATCATGTGCCCTCACATATCGAACGACCTGATTATGCAATTAGTTCTATTCCAGAATCG GAATTAATATATAAGAGAAAAAGTGATATTTATGTAAATAATGAAGAAGAAATACAAAGA ATTAGAGAAGCTTGTATATTAGGAAGAAAAACCTTAGACTATGCTCATACGTTAGTTTCA CCAGGAGTTACTACTGATGAAATAGATAGAAAAGTTCACGAATTTATAATTAAAAATAAT GCATATCCATCAACTTTAAATTATTATAAATTTCCAAAATCATGTTGTACTTCTGTGAAT GAAATTGTATGTCATGGGATACCAGATTATAGACCATTAAAATCTGGTGATATAATAAAT ATTGATATTAGTGTTTTTTATAAAGGTGTACATTCAGATTTAAATGAAACTTATTTTGTT GGAGATATAAATGATGTACCAAAAGAAGGTAAAGAATTAGTAGAGACTTGTTATTTTTCT TTAATGGAAGCTATTAAAAAATGTAAACCTGGAATGTTTTATAAAAATATTGGAACTTTA ATAGATGCATATGTATCAAAAAAAAACTTCTCAGTTGTTCGTTCCTATTCAGGACATGGT GTTGGAAAACTATTTCACAGTAATCCAACCGTACCTCATTTTAAAAAAAATAAAGCCGTA GGTATAATGAAACCAGGTCATGTTTTTACTATTGAACCTATGATTAATCAAGGACATTAT AGTGATGTATTATGGCCAGATCAATGGACAAGTGCAACATCAGATGGAAAATTGTCAGCT CAGTTTGAACACACTTTATTAATTACTAACAACGGTGTAGAAATTTTGACAAAGCGAACT CAAGATTCACCTCCACTTGGTTTTGATACAAAAGATGAACTATACTATAATTAA
  • Download Fasta

  • Fasta :-

    MANIDDIEKQIENIKINSDDNKNNVSKNKNILLNGVNLKDHEIKDNVKSVDYNNNNNEND TMNEINKHVKNDEYCNKENSNNNNNNNNNNNNNLDTQINETLNLNEKFEKKNEENLCSGC KKVLIKKLSCPICLKNKIFSYFCNQECFKGSWKEHQKIHENMNKENNEKEDHLKTIVKKH LSPENFDPTNRKYWVYDDHLKNFVNFKFTGDVRPWPLSKINHVPSHIERPDYAISSIPES ELIYKRKSDIYVNNEEEIQRIREACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFIIKNN AYPSTLNYYKFPKSCCTSVNEIVCHGIPDYRPLKSGDIINIDISVFYKGVHSDLNETYFV GDINDVPKEGKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVVRSYSGHG VGKLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPMINQGHYSDVLWPDQWTSATSDGKLSA QFEHTLLITNNGVEILTKRTQDSPPLGFDTKDELYYN

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1015300151 SCFKGSWKEH0.993unspPF3D7_1015300182 SKKHLSPENF0.995unsp

PF10_0150      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India